RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 SLC39A4Q6P5W5 647 aa15.48■□□□□ 0.07
SDF2-201ENST00000247020 ZPBP2Q6X784 338 aa15.48■□□□□ 0.07
SDF2-201ENST00000247020 CACNA2D4Q7Z3S7 1137 aa15.48■□□□□ 0.07
SDF2-201ENST00000247020 GPD1LQ8N335 351 aa15.48■□□□□ 0.07
SDF2-201ENST00000247020 C17orf53Q8N3J3 647 aaPredicted RBP15.48■□□□□ 0.07
SDF2-201ENST00000247020 LINC01465Q8N7H1 131 aa15.48■□□□□ 0.07
SDF2-201ENST00000247020 TMC2Q8TDI7 906 aa15.48■□□□□ 0.07
SDF2-201ENST00000247020 LSM14BQ9BX40 385 aaKnown RBP15.48■□□□□ 0.07
SDF2-201ENST00000247020 PCIF1Q9H4Z3 704 aa15.48■□□□□ 0.07
SDF2-201ENST00000247020 FAM207AQ9NSI2 230 aaPredicted RBP15.48■□□□□ 0.07
SDF2-201ENST00000247020 AGPAT5Q9NUQ2 364 aa15.48■□□□□ 0.07
SDF2-201ENST00000247020 THSD7BQ9C0I4 1608 aa15.47■□□□□ 0.07
SDF2-201ENST00000247020 RRN3P2A6NIE6 340 aa15.47■□□□□ 0.07
SDF2-201ENST00000247020 ADCY6O43306 1168 aa15.47■□□□□ 0.07
SDF2-201ENST00000247020 OFD1O75665 1012 aa15.47■□□□□ 0.07
SDF2-201ENST00000247020 NOL4O94818 638 aa15.47■□□□□ 0.07
SDF2-201ENST00000247020 AKR1A1P14550 325 aa15.47■□□□□ 0.07
SDF2-201ENST00000247020 TMOD1P28289 359 aa15.47■□□□□ 0.07
SDF2-201ENST00000247020 PSMC4P43686 418 aa15.47■□□□□ 0.07
SDF2-201ENST00000247020 APLP1P51693 650 aa15.47■□□□□ 0.07
SDF2-201ENST00000247020 CETN1Q12798 172 aa15.47■□□□□ 0.07
SDF2-201ENST00000247020 SNRNP35Q16560 246 aaKnown RBP15.47■□□□□ 0.07
SDF2-201ENST00000247020 CCL14Q16627 93 aa15.47■□□□□ 0.07
SDF2-201ENST00000247020 EFCAB12Q6NXP0 572 aa15.47■□□□□ 0.07
SDF2-201ENST00000247020 TLK2Q86UE8 772 aa15.47■□□□□ 0.07
SDF2-201ENST00000247020 IFNLR1Q8IU57 520 aaPredicted RBP15.47■□□□□ 0.07
SDF2-201ENST00000247020 CCDC170Q8IYT3 715 aa15.47■□□□□ 0.07
SDF2-201ENST00000247020 CCDC155Q8N6L0 562 aa15.47■□□□□ 0.07
SDF2-201ENST00000247020 POMGNT1Q8WZA1 660 aa15.47■□□□□ 0.07
SDF2-201ENST00000247020 BAP1Q92560 729 aa15.47■□□□□ 0.07
SDF2-201ENST00000247020 CCDC113Q9H0I3 377 aa15.47■□□□□ 0.07
SDF2-201ENST00000247020 GANQ9H2C0 597 aa15.47■□□□□ 0.07
SDF2-201ENST00000247020 SUGCTQ9HAC7 445 aa15.47■□□□□ 0.07
SDF2-201ENST00000247020 SUCLA2Q9P2R7 463 aaPredicted RBP15.47■□□□□ 0.07
SDF2-201ENST00000247020 SOWAHDA6NJG2 315 aa15.46■□□□□ 0.07
SDF2-201ENST00000247020 TISP43B9A030 160 aa15.46■□□□□ 0.07
SDF2-201ENST00000247020 F2P00734 622 aa15.46■□□□□ 0.07
SDF2-201ENST00000247020 CCDC175P0C221 793 aa15.46■□□□□ 0.07
SDF2-201ENST00000247020 ZNF286BP0CG31 522 aa15.46■□□□□ 0.07
SDF2-201ENST00000247020 RFX1P22670 979 aa15.46■□□□□ 0.07
SDF2-201ENST00000247020 PON1P27169 355 aa15.46■□□□□ 0.07
SDF2-201ENST00000247020 CTGFP29279 349 aa15.46■□□□□ 0.07
SDF2-201ENST00000247020 CYP2C19P33261 490 aa15.46■□□□□ 0.07
SDF2-201ENST00000247020 KIF22Q14807 665 aa15.46■□□□□ 0.07
SDF2-201ENST00000247020 PDXDC1Q6P996 788 aa15.46■□□□□ 0.07
SDF2-201ENST00000247020 WDR59Q6PJI9 974 aa15.46■□□□□ 0.07
SDF2-201ENST00000247020 FMNL3Q8IVF7 1028 aa15.46■□□□□ 0.07
SDF2-201ENST00000247020 VTI1AQ96AJ9 217 aa15.46■□□□□ 0.07
SDF2-201ENST00000247020 PPP1R13BQ96KQ4 1090 aa15.46■□□□□ 0.07
SDF2-201ENST00000247020 MFSD14AQ96MC6 490 aa15.46■□□□□ 0.07
SDF2-201ENST00000247020 GCNT4Q9P109 453 aa15.46■□□□□ 0.07
SDF2-201ENST00000247020 PPP2R2CQ9Y2T4 447 aa15.46■□□□□ 0.07
SDF2-201ENST00000247020 EPHB6O15197 1021 aa15.45■□□□□ 0.06
SDF2-201ENST00000247020 DYNC1LI2O43237 492 aaPredicted RBP15.45■□□□□ 0.06
SDF2-201ENST00000247020 EXTL3O43909 919 aa15.45■□□□□ 0.06
SDF2-201ENST00000247020 GTF2H1P32780 548 aa15.45■□□□□ 0.06
SDF2-201ENST00000247020 CYLC1P35663 651 aaPredicted RBP15.45■□□□□ 0.06
SDF2-201ENST00000247020 DRP2Q13474 957 aa15.45■□□□□ 0.06
SDF2-201ENST00000247020 MFSD14CQ5VZR4 134 aa15.45■□□□□ 0.06
SDF2-201ENST00000247020 DPY19L2P1Q6NXN4 242 aa15.45■□□□□ 0.06
SDF2-201ENST00000247020 RAD9BQ6WBX8 426 aa15.45■□□□□ 0.06
SDF2-201ENST00000247020 NYAP1Q6ZVC0 841 aa15.45■□□□□ 0.06
SDF2-201ENST00000247020 LRRC71Q8N4P6 559 aa15.45■□□□□ 0.06
SDF2-201ENST00000247020 RNF149Q8NC42 400 aa15.45■□□□□ 0.06
SDF2-201ENST00000247020 KATNAL1Q9BW62 490 aa15.45■□□□□ 0.06
SDF2-201ENST00000247020 MRPL4Q9BYD3 311 aaKnown RBP15.45■□□□□ 0.06
SDF2-201ENST00000247020 AP5M1Q9H0R1 490 aa15.45■□□□□ 0.06
SDF2-201ENST00000247020 USP20Q9Y2K6 914 aa15.45■□□□□ 0.06
SDF2-201ENST00000247020 MSCO60682 206 aa15.45■□□□□ 0.06
SDF2-201ENST00000247020 DUSP11O75319 330 aaKnown RBP15.45■□□□□ 0.06
SDF2-201ENST00000247020 KLRC1P26715 233 aa15.45■□□□□ 0.06
SDF2-201ENST00000247020 MAP2K2P36507 400 aa15.45■□□□□ 0.06
SDF2-201ENST00000247020 PTENP60484 403 aa15.45■□□□□ 0.06
SDF2-201ENST00000247020 CDC42EP1Q00587 391 aa15.45■□□□□ 0.06
SDF2-201ENST00000247020 MYL7Q01449 175 aa15.45■□□□□ 0.06
SDF2-201ENST00000247020 SP3Q02447 781 aa15.45■□□□□ 0.06
SDF2-201ENST00000247020 PPFIA1Q13136 1202 aa15.45■□□□□ 0.06
SDF2-201ENST00000247020 GRM1Q13255 1194 aa15.45■□□□□ 0.06
SDF2-201ENST00000247020 PTPN14Q15678 1187 aa15.45■□□□□ 0.06
SDF2-201ENST00000247020 GRIK4Q16099 956 aa15.45■□□□□ 0.06
SDF2-201ENST00000247020 MAPK6Q16659 721 aa15.45■□□□□ 0.06
SDF2-201ENST00000247020 FAM187BQ17R55 369 aa15.45■□□□□ 0.06
SDF2-201ENST00000247020 PRAMEF19Q5SWL8 479 aa15.45■□□□□ 0.06
SDF2-201ENST00000247020 KLHDC7AQ5VTJ3 777 aa15.45■□□□□ 0.06
SDF2-201ENST00000247020 MTHFD1LQ6UB35 978 aa15.45■□□□□ 0.06
SDF2-201ENST00000247020 RHPN2Q8IUC4 686 aa15.45■□□□□ 0.06
SDF2-201ENST00000247020 RDH13Q8NBN7 331 aa15.45■□□□□ 0.06
SDF2-201ENST00000247020 PARD3BQ8TEW8 1205 aa15.45■□□□□ 0.06
SDF2-201ENST00000247020 TRAPPC12Q8WVT3 735 aa15.45■□□□□ 0.06
SDF2-201ENST00000247020 CRACR2AQ9BSW2 395 aa15.45■□□□□ 0.06
SDF2-201ENST00000247020 ADGRG1Q9Y653 693 aa15.45■□□□□ 0.06
SDF2-201ENST00000247020 NRCAMQ92823 1304 aa15.44■□□□□ 0.06
SDF2-201ENST00000247020 SSU72P8A0A1W2PR75 194 aa15.44■□□□□ 0.06
SDF2-201ENST00000247020 ZNF233A6NK53 670 aa15.44■□□□□ 0.06
SDF2-201ENST00000247020 LRRC53A6NM62 1247 aa15.44■□□□□ 0.06
SDF2-201ENST00000247020 USP27XA6NNY8 438 aa15.44■□□□□ 0.06
SDF2-201ENST00000247020 KPNA6O60684 536 aa15.44■□□□□ 0.06
SDF2-201ENST00000247020 AOC2O75106 756 aa15.44■□□□□ 0.06
SDF2-201ENST00000247020 TOM1L1O75674 476 aa15.44■□□□□ 0.06
SDF2-201ENST00000247020 PRKCBP05771 671 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms