RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 KCTD21Q4G0X4 260 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 BTNL9Q6UXG8 535 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 ZNF564Q8TBZ8 553 aaPredicted RBP8.01□□□□□ -1.13
RIF1-201ENST00000243326 PDCD6IPQ8WUM4 868 aaKnown RBP8.01□□□□□ -1.13
RIF1-201ENST00000243326 OTULINQ96BN8 352 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 MXD3Q9BW11 206 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 EPS15L1Q9UBC2 864 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 SAMD9Q5K651 1589 aa8.01□□□□□ -1.13
RIF1-201ENST00000243326 PTCH1Q13635 1447 aa8□□□□□ -1.13
RIF1-201ENST00000243326 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8□□□□□ -1.13
RIF1-201ENST00000243326 LTKP29376 864 aa8□□□□□ -1.13
RIF1-201ENST00000243326 DLGAP5Q15398 846 aa8□□□□□ -1.13
RIF1-201ENST00000243326 ARHGAP18Q8N392 663 aa8□□□□□ -1.13
RIF1-201ENST00000243326 RIN3Q8TB24 985 aa8□□□□□ -1.13
RIF1-201ENST00000243326 ZNF804BA4D1E1 1349 aa8□□□□□ -1.13
RIF1-201ENST00000243326 ANP32DO95626 131 aa8□□□□□ -1.13
RIF1-201ENST00000243326 SOX5P35711 763 aa8□□□□□ -1.13
RIF1-201ENST00000243326 AP2B1P63010 937 aa8□□□□□ -1.13
RIF1-201ENST00000243326 ERP27Q96DN0 273 aa8□□□□□ -1.13
RIF1-201ENST00000243326 ERICH1Q86X53 443 aa8□□□□□ -1.13
RIF1-201ENST00000243326 DIS3LQ8TF46 1054 aaKnown RBP8□□□□□ -1.13
RIF1-201ENST00000243326 CALCAP01258 141 aa8□□□□□ -1.13
RIF1-201ENST00000243326 PLOD1Q02809 727 aaPredicted RBP8□□□□□ -1.13
RIF1-201ENST00000243326 RABGAP1LQ5R372 815 aa8□□□□□ -1.13
RIF1-201ENST00000243326 IFNEQ86WN2 208 aa8□□□□□ -1.13
RIF1-201ENST00000243326 ACAP3Q96P50 834 aa8□□□□□ -1.13
RIF1-201ENST00000243326 SNX25Q9H3E2 840 aa8□□□□□ -1.13
RIF1-201ENST00000243326 APOBEC2Q9Y235 224 aaKnown RBP8□□□□□ -1.13
RIF1-201ENST00000243326 ARID1BQ8NFD5 2236 aaPredicted RBP8□□□□□ -1.13
RIF1-201ENST00000243326 P4HA1P13674 534 aa8□□□□□ -1.13
RIF1-201ENST00000243326 ENAHQ8N8S7 591 aaPredicted RBP8□□□□□ -1.13
RIF1-201ENST00000243326 AP1G2O75843 785 aa8□□□□□ -1.13
RIF1-201ENST00000243326 MXI1P50539 228 aa8□□□□□ -1.13
RIF1-201ENST00000243326 BLVRAP53004 296 aa8□□□□□ -1.13
RIF1-201ENST00000243326 RBBP7Q16576 425 aa8□□□□□ -1.13
RIF1-201ENST00000243326 DDIASQ8IXT1 998 aa8□□□□□ -1.13
RIF1-201ENST00000243326 EME2A4GXA9 379 aaPredicted RBP8□□□□□ -1.13
RIF1-201ENST00000243326 PCMTD2Q9NV79 361 aa8□□□□□ -1.13
RIF1-201ENST00000243326 CCDC68Q9H2F9 335 aa8□□□□□ -1.13
RIF1-201ENST00000243326 EMSYQ7Z589 1322 aa8□□□□□ -1.13
RIF1-201ENST00000243326 PCCAP05165 728 aaPredicted RBP8□□□□□ -1.13
RIF1-201ENST00000243326 FKBP3Q00688 224 aaKnown RBP8□□□□□ -1.13
RIF1-201ENST00000243326 DNAJC3Q13217 504 aa8□□□□□ -1.13
RIF1-201ENST00000243326 P3H1Q32P28 736 aa8□□□□□ -1.13
RIF1-201ENST00000243326 ATG16L1Q676U5 607 aa8□□□□□ -1.13
RIF1-201ENST00000243326 PARVGQ9HBI0 331 aa8□□□□□ -1.13
RIF1-201ENST00000243326 METTL5Q9NRN9 209 aaKnown RBP8□□□□□ -1.13
RIF1-201ENST00000243326 GIMAP4Q9NUV9 329 aa8□□□□□ -1.13
RIF1-201ENST00000243326 STXBP3O00186 592 aa8□□□□□ -1.13
RIF1-201ENST00000243326 ATP1A4Q13733 1029 aa8□□□□□ -1.13
RIF1-201ENST00000243326 KYNUQ16719 465 aa8□□□□□ -1.13
RIF1-201ENST00000243326 EFCAB3Q8N7B9 438 aa8□□□□□ -1.13
RIF1-201ENST00000243326 ARL10Q8N8L6 244 aa8□□□□□ -1.13
RIF1-201ENST00000243326 CAND2O75155 1236 aa8□□□□□ -1.13
RIF1-201ENST00000243326 UNKQ9C0B0 810 aaKnown RBP8□□□□□ -1.13
RIF1-201ENST00000243326 RGL1Q9NZL6 768 aa8□□□□□ -1.13
RIF1-201ENST00000243326 ATP7AQ04656 1500 aa8□□□□□ -1.13
RIF1-201ENST00000243326 TRIP10Q15642 601 aa8□□□□□ -1.13
RIF1-201ENST00000243326 KCNB2Q92953 911 aa8□□□□□ -1.13
RIF1-201ENST00000243326 ANKRD36BP1Q96IX9 119 aa8□□□□□ -1.13
RIF1-201ENST00000243326 DACH2Q96NX9 599 aa8□□□□□ -1.13
RIF1-201ENST00000243326 AIM2O14862 343 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 ZC2HC1CQ53FD0 456 aaPredicted RBP7.99□□□□□ -1.13
RIF1-201ENST00000243326 UBE4BO95155 1302 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 TPST1O60507 370 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 CRKLP46109 303 aaKnown RBP7.99□□□□□ -1.13
RIF1-201ENST00000243326 NME3Q13232 169 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 PDCD2Q16342 344 aaPredicted RBP7.99□□□□□ -1.13
RIF1-201ENST00000243326 CCDC117Q8IWD4 279 aaPredicted RBP7.99□□□□□ -1.13
RIF1-201ENST00000243326 ZSWIM2Q8NEG5 633 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 SYDE2Q5VT97 1194 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 FBXL13Q8NEE6 735 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 FAM49AQ9H0Q0 323 aaPredicted RBP7.99□□□□□ -1.13
RIF1-201ENST00000243326 GYPCP04921 128 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 GCFC2P16383 781 aaKnown RBP7.99□□□□□ -1.13
RIF1-201ENST00000243326 CCDC92Q53HC0 331 aaPredicted RBP7.99□□□□□ -1.13
RIF1-201ENST00000243326 MB21D2Q8IYB1 491 aaPredicted RBP7.99□□□□□ -1.13
RIF1-201ENST00000243326 CLMNQ96JQ2 1002 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 ZNF446Q9NWS9 450 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 KNTC1P50748 2209 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 MAP3K15Q6ZN16 1313 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 DOPEY2Q9Y3R5 2298 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 CTDNEP1O95476 244 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 SRBD1Q8N5C6 995 aaKnown RBP7.99□□□□□ -1.13
RIF1-201ENST00000243326 TMEM237Q96Q45 408 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 NLRP10Q86W26 655 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 PARD3BQ8TEW8 1205 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 OCA2Q04671 838 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 DMPKQ09013 629 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 PLCB4Q15147 1175 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 PARP10Q53GL7 1025 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 AGAP3Q96P47 875 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 MRPL11Q9Y3B7 192 aaKnown RBP7.99□□□□□ -1.13
RIF1-201ENST00000243326 RNF103-CHMP3A0A140T963 221 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 PI4K2AQ9BTU6 479 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 L3MBTL1Q9Y468 752 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 B2RBV5 119 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 GPC5P78333 572 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 RASGRP2Q7LDG7 609 aa7.99□□□□□ -1.13
RIF1-201ENST00000243326 ZBTB8OSQ8IWT0 167 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms