RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 POMGNT1Q8WZA1 660 aa25.27■■□□□ 1.64
MSX2-201ENST00000239243 FAM167AQ96KS9 214 aa25.27■■□□□ 1.64
MSX2-201ENST00000239243 FBXL18Q96ME1 805 aa25.27■■□□□ 1.64
MSX2-201ENST00000239243 PORCNQ9H237 461 aa25.27■■□□□ 1.64
MSX2-201ENST00000239243 NAGPAQ9UK23 515 aa25.27■■□□□ 1.64
MSX2-201ENST00000239243 SNX12Q9UMY4 172 aa25.27■■□□□ 1.64
MSX2-201ENST00000239243 EVI5O60447 810 aa25.27■■□□□ 1.64
MSX2-201ENST00000239243 STAT5BP51692 787 aa25.27■■□□□ 1.64
MSX2-201ENST00000239243 Q3C1V9 767 aa25.27■■□□□ 1.64
MSX2-201ENST00000239243 EPC2Q52LR7 807 aa25.27■■□□□ 1.64
MSX2-201ENST00000239243 TMC2Q8TDI7 906 aa25.27■■□□□ 1.64
MSX2-201ENST00000239243 BICD1Q96G01 975 aa25.27■■□□□ 1.64
MSX2-201ENST00000239243 NAMPTP43490 491 aa25.26■■□□□ 1.63
MSX2-201ENST00000239243 GCLMP48507 274 aa25.26■■□□□ 1.63
MSX2-201ENST00000239243 ALKBH5Q6P6C2 394 aaKnown RBP25.26■■□□□ 1.63
MSX2-201ENST00000239243 ANKRD13CQ8N6S4 541 aa25.26■■□□□ 1.63
MSX2-201ENST00000239243 AZI2Q9H6S1 392 aa25.26■■□□□ 1.63
MSX2-201ENST00000239243 USP20Q9Y2K6 914 aa25.26■■□□□ 1.63
MSX2-201ENST00000239243 KIAA0391O15091 583 aaKnown RBP25.25■■□□□ 1.63
MSX2-201ENST00000239243 GRIN3BO60391 1043 aa25.25■■□□□ 1.63
MSX2-201ENST00000239243 PGK2P07205 417 aa25.25■■□□□ 1.63
MSX2-201ENST00000239243 ADRB2P07550 413 aa25.25■■□□□ 1.63
MSX2-201ENST00000239243 TCP1P17987 556 aaKnown RBP25.25■■□□□ 1.63
MSX2-201ENST00000239243 CLCN6P51797 869 aa25.25■■□□□ 1.63
MSX2-201ENST00000239243 ERVK-9P63128 1117 aa25.25■■□□□ 1.63
MSX2-201ENST00000239243 STRN3Q13033 797 aa25.25■■□□□ 1.63
MSX2-201ENST00000239243 IFI16Q16666 785 aaKnown RBP25.25■■□□□ 1.63
MSX2-201ENST00000239243 C1orf220Q5T0J3 134 aa25.25■■□□□ 1.63
MSX2-201ENST00000239243 CBWD2Q8IUF1 395 aa25.25■■□□□ 1.63
MSX2-201ENST00000239243 KIAA1586Q9HCI6 787 aa25.25■■□□□ 1.63
MSX2-201ENST00000239243 SALL4Q9UJQ4 1053 aa25.25■■□□□ 1.63
MSX2-201ENST00000239243 INTUQ9ULD6 942 aa25.25■■□□□ 1.63
MSX2-201ENST00000239243 GOLGA8IPA6NC78 632 aa25.25■■□□□ 1.63
MSX2-201ENST00000239243 GOLGA8JA6NMD2 632 aa25.25■■□□□ 1.63
MSX2-201ENST00000239243 TUBBP07437 444 aa25.25■■□□□ 1.63
MSX2-201ENST00000239243 TCF7P36402 384 aaPredicted RBP25.25■■□□□ 1.63
MSX2-201ENST00000239243 GPD1LQ8N335 351 aa25.25■■□□□ 1.63
MSX2-201ENST00000239243 PCYT2Q99447 389 aa25.25■■□□□ 1.63
MSX2-201ENST00000239243 DDX41Q9UJV9 622 aaKnown RBP25.25■■□□□ 1.63
MSX2-201ENST00000239243 HYOU1Q9Y4L1 999 aa25.25■■□□□ 1.63
MSX2-201ENST00000239243 GTF2H1P32780 548 aa25.24■■□□□ 1.63
MSX2-201ENST00000239243 GJA5P36382 358 aa25.24■■□□□ 1.63
MSX2-201ENST00000239243 PHLDB3Q6NSJ2 640 aa25.24■■□□□ 1.63
MSX2-201ENST00000239243 SLC39A4Q6P5W5 647 aa25.24■■□□□ 1.63
MSX2-201ENST00000239243 TMCO3Q6UWJ1 677 aa25.24■■□□□ 1.63
MSX2-201ENST00000239243 EEPD1Q7L9B9 569 aa25.24■■□□□ 1.63
MSX2-201ENST00000239243 PARD3BQ8TEW8 1205 aa25.24■■□□□ 1.63
MSX2-201ENST00000239243 SAAL1Q96ER3 474 aa25.24■■□□□ 1.63
MSX2-201ENST00000239243 FGD4Q96M96 766 aa25.24■■□□□ 1.63
MSX2-201ENST00000239243 MFSD14AQ96MC6 490 aa25.24■■□□□ 1.63
MSX2-201ENST00000239243 TMEM117Q9H0C3 514 aa25.24■■□□□ 1.63
MSX2-201ENST00000239243 BUB1O43683 1085 aa25.24■■□□□ 1.63
MSX2-201ENST00000239243 ZSCAN20P17040 1043 aaPredicted RBP25.24■■□□□ 1.63
MSX2-201ENST00000239243 KLRC1P26715 233 aa25.24■■□□□ 1.63
MSX2-201ENST00000239243 ARL2P36404 184 aa25.24■■□□□ 1.63
MSX2-201ENST00000239243 TARBP2Q15633 366 aaKnown RBP25.24■■□□□ 1.63
MSX2-201ENST00000239243 WDR78Q5VTH9 848 aa25.24■■□□□ 1.63
MSX2-201ENST00000239243 KRT39Q6A163 491 aa25.24■■□□□ 1.63
MSX2-201ENST00000239243 PLEKHO2Q8TD55 490 aa25.24■■□□□ 1.63
MSX2-201ENST00000239243 MORC4Q8TE76 937 aa25.24■■□□□ 1.63
MSX2-201ENST00000239243 GPR88Q9GZN0 384 aa25.24■■□□□ 1.63
MSX2-201ENST00000239243 NENFQ9UMX5 172 aa25.24■■□□□ 1.63
MSX2-201ENST00000239243 CLEC11AQ9Y240 323 aa25.24■■□□□ 1.63
MSX2-201ENST00000239243 LIG4P49917 911 aa25.23■■□□□ 1.63
MSX2-201ENST00000239243 CCNA1P78396 465 aa25.23■■□□□ 1.63
MSX2-201ENST00000239243 LY6KQ17RY6 165 aa25.23■■□□□ 1.63
MSX2-201ENST00000239243 MSANTD4Q8NCY6 345 aa25.23■■□□□ 1.63
MSX2-201ENST00000239243 ZSWIM2Q8NEG5 633 aa25.23■■□□□ 1.63
MSX2-201ENST00000239243 DEPTORQ8TB45 409 aa25.23■■□□□ 1.63
MSX2-201ENST00000239243 CAGE1Q8TC20 777 aa25.23■■□□□ 1.63
MSX2-201ENST00000239243 CEP89Q96ST8 783 aa25.23■■□□□ 1.63
MSX2-201ENST00000239243 PARD6BQ9BYG5 372 aa25.23■■□□□ 1.63
MSX2-201ENST00000239243 TMEM8AQ9HCN3 771 aa25.23■■□□□ 1.63
MSX2-201ENST00000239243 SLC45A1Q9Y2W3 748 aa25.23■■□□□ 1.63
MSX2-201ENST00000239243 PCDHGC5Q9Y5F6 944 aa25.23■■□□□ 1.63
MSX2-201ENST00000239243 SOCS7O14512 581 aa25.22■■□□□ 1.63
MSX2-201ENST00000239243 SRGAP2O75044 1071 aa25.22■■□□□ 1.63
MSX2-201ENST00000239243 EXOC8Q8IYI6 725 aa25.22■■□□□ 1.63
MSX2-201ENST00000239243 TMEM143Q96AN5 459 aa25.22■■□□□ 1.63
MSX2-201ENST00000239243 NOP56O00567 594 aaKnown RBP25.22■■□□□ 1.63
MSX2-201ENST00000239243 TFRCP02786 760 aaKnown RBP25.22■■□□□ 1.63
MSX2-201ENST00000239243 CELF3Q5SZQ8 465 aaKnown RBP25.22■■□□□ 1.63
MSX2-201ENST00000239243 TAS1R3Q7RTX0 852 aa25.22■■□□□ 1.63
MSX2-201ENST00000239243 R3HDMLQ9H3Y0 253 aa25.22■■□□□ 1.63
MSX2-201ENST00000239243 UBE2TQ9NPD8 197 aaPredicted RBP25.22■■□□□ 1.63
MSX2-201ENST00000239243 ASB14A6NK59 587 aa25.21■■□□□ 1.63
MSX2-201ENST00000239243 GLRA2P23416 452 aa25.21■■□□□ 1.63
MSX2-201ENST00000239243 CYP24A1Q07973 514 aa25.21■■□□□ 1.63
MSX2-201ENST00000239243 KIF22Q14807 665 aa25.21■■□□□ 1.63
MSX2-201ENST00000239243 ARHGAP44Q17R89 818 aa25.21■■□□□ 1.63
MSX2-201ENST00000239243 BBXQ8WY36 941 aaPredicted RBP25.21■■□□□ 1.63
MSX2-201ENST00000239243 PACSIN1Q9BY11 444 aa25.21■■□□□ 1.63
MSX2-201ENST00000239243 COQ4Q9Y3A0 265 aa25.21■■□□□ 1.63
MSX2-201ENST00000239243 MYH10P35580 1976 aa25.21■■□□□ 1.63
MSX2-201ENST00000239243 DDX3XO00571 662 aaKnown RBP eCLIP25.21■■□□□ 1.63
MSX2-201ENST00000239243 PIGRP01833 764 aa25.21■■□□□ 1.63
MSX2-201ENST00000239243 H2AFZP0C0S5 128 aa25.21■■□□□ 1.63
MSX2-201ENST00000239243 PNMA6AP0CW24 399 aaPredicted RBP25.21■■□□□ 1.63
MSX2-201ENST00000239243 CETPP11597 493 aa25.21■■□□□ 1.63
MSX2-201ENST00000239243 BRD3Q15059 726 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms