RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 EFCAB12Q6NXP0 572 aa16.6■□□□□ 0.25
HDHD3-201ENST00000238379 POMGNT1Q8WZA1 660 aa16.6■□□□□ 0.25
HDHD3-201ENST00000238379 GANQ9H2C0 597 aa16.6■□□□□ 0.25
HDHD3-201ENST00000238379 PLCB1Q9NQ66 1216 aa16.6■□□□□ 0.25
HDHD3-201ENST00000238379 CEP72Q9P209 647 aa16.6■□□□□ 0.25
HDHD3-201ENST00000238379 SUCLA2Q9P2R7 463 aaPredicted RBP16.6■□□□□ 0.25
HDHD3-201ENST00000238379 COL1A2P08123 1366 aa16.6■□□□□ 0.25
HDHD3-201ENST00000238379 SIP14410 1827 aa16.59■□□□□ 0.25
HDHD3-201ENST00000238379 MGAMO43451 1857 aa16.59■□□□□ 0.25
HDHD3-201ENST00000238379 ADRB2P07550 413 aa16.59■□□□□ 0.25
HDHD3-201ENST00000238379 KLRC1P26715 233 aa16.59■□□□□ 0.25
HDHD3-201ENST00000238379 LIG4P49917 911 aa16.59■□□□□ 0.25
HDHD3-201ENST00000238379 EFNA5P52803 228 aa16.59■□□□□ 0.25
HDHD3-201ENST00000238379 DLG4P78352 724 aa16.59■□□□□ 0.25
HDHD3-201ENST00000238379 SNRNP35Q16560 246 aaKnown RBP16.59■□□□□ 0.25
HDHD3-201ENST00000238379 CBWD6Q4V339 395 aa16.59■□□□□ 0.25
HDHD3-201ENST00000238379 CBWD3Q5JTY5 395 aa16.59■□□□□ 0.25
HDHD3-201ENST00000238379 CBWD5Q5RIA9 395 aa16.59■□□□□ 0.25
HDHD3-201ENST00000238379 CDCA2Q69YH5 1023 aaPredicted RBP16.59■□□□□ 0.25
HDHD3-201ENST00000238379 GBP6Q6ZN66 633 aa16.59■□□□□ 0.25
HDHD3-201ENST00000238379 CBWD2Q8IUF1 395 aa16.59■□□□□ 0.25
HDHD3-201ENST00000238379 LINC01465Q8N7H1 131 aa16.59■□□□□ 0.25
HDHD3-201ENST00000238379 PLEKHO2Q8TD55 490 aa16.59■□□□□ 0.25
HDHD3-201ENST00000238379 SAAL1Q96ER3 474 aa16.59■□□□□ 0.25
HDHD3-201ENST00000238379 BICD1Q96G01 975 aa16.59■□□□□ 0.25
HDHD3-201ENST00000238379 CCDC113Q9H0I3 377 aa16.59■□□□□ 0.25
HDHD3-201ENST00000238379 CREBZFQ9NS37 354 aa16.59■□□□□ 0.25
HDHD3-201ENST00000238379 USP20Q9Y2K6 914 aa16.59■□□□□ 0.25
HDHD3-201ENST00000238379 PPP2R2CQ9Y2T4 447 aa16.59■□□□□ 0.25
HDHD3-201ENST00000238379 PHLPP2Q6ZVD8 1323 aa16.59■□□□□ 0.25
HDHD3-201ENST00000238379 MAGEB2O15479 319 aa16.59■□□□□ 0.25
HDHD3-201ENST00000238379 EDN1P05305 212 aa16.59■□□□□ 0.25
HDHD3-201ENST00000238379 CLCN3P51790 818 aa16.59■□□□□ 0.25
HDHD3-201ENST00000238379 IGBP1P78318 339 aa16.59■□□□□ 0.25
HDHD3-201ENST00000238379 CDK17Q00537 523 aa16.59■□□□□ 0.25
HDHD3-201ENST00000238379 C1orf220Q5T0J3 134 aa16.59■□□□□ 0.25
HDHD3-201ENST00000238379 NYAP1Q6ZVC0 841 aa16.59■□□□□ 0.25
HDHD3-201ENST00000238379 RRAGAQ7L523 313 aa16.59■□□□□ 0.25
HDHD3-201ENST00000238379 CACNA2D4Q7Z3S7 1137 aa16.59■□□□□ 0.25
HDHD3-201ENST00000238379 TLK2Q86UE8 772 aa16.59■□□□□ 0.25
HDHD3-201ENST00000238379 REM2Q8IYK8 340 aaPredicted RBP16.59■□□□□ 0.25
HDHD3-201ENST00000238379 METTL13Q8N6R0 699 aa16.59■□□□□ 0.25
HDHD3-201ENST00000238379 RNF149Q8NC42 400 aa16.59■□□□□ 0.25
HDHD3-201ENST00000238379 LENG1Q96BZ8 264 aaPredicted RBP16.59■□□□□ 0.25
HDHD3-201ENST00000238379 C16orf45Q96MC5 204 aaPredicted RBP16.59■□□□□ 0.25
HDHD3-201ENST00000238379 DESI2Q9BSY9 194 aa16.59■□□□□ 0.25
HDHD3-201ENST00000238379 ADGRG1Q9Y653 693 aa16.59■□□□□ 0.25
HDHD3-201ENST00000238379 LRRC53A6NM62 1247 aa16.58■□□□□ 0.24
HDHD3-201ENST00000238379 CCP110O43303 1012 aa16.58■□□□□ 0.24
HDHD3-201ENST00000238379 MSCO60682 206 aa16.58■□□□□ 0.24
HDHD3-201ENST00000238379 GJB1P08034 283 aa16.58■□□□□ 0.24
HDHD3-201ENST00000238379 SRGAP2CP0DJJ0 459 aa16.58■□□□□ 0.24
HDHD3-201ENST00000238379 ACTN1P12814 892 aa16.58■□□□□ 0.24
HDHD3-201ENST00000238379 POLR2FP61218 127 aaKnown RBP16.58■□□□□ 0.24
HDHD3-201ENST00000238379 PDXDC1Q6P996 788 aa16.58■□□□□ 0.24
HDHD3-201ENST00000238379 RHPN2Q8IUC4 686 aa16.58■□□□□ 0.24
HDHD3-201ENST00000238379 REXO1L1PQ8IX06 675 aa16.58■□□□□ 0.24
HDHD3-201ENST00000238379 TARS2Q9BW92 718 aaKnown RBP16.58■□□□□ 0.24
HDHD3-201ENST00000238379 SIX2Q9NPC8 291 aa16.58■□□□□ 0.24
HDHD3-201ENST00000238379 NLRC4Q9NPP4 1024 aa16.58■□□□□ 0.24
HDHD3-201ENST00000238379 ZNHIT6Q9NWK9 470 aaKnown RBP16.58■□□□□ 0.24
HDHD3-201ENST00000238379 GCNT4Q9P109 453 aa16.58■□□□□ 0.24
HDHD3-201ENST00000238379 GABRQQ9UN88 632 aa16.58■□□□□ 0.24
HDHD3-201ENST00000238379 ZSWIM8A7E2V4 1837 aa16.58■□□□□ 0.24
HDHD3-201ENST00000238379 ASAP2O43150 1006 aa16.57■□□□□ 0.24
HDHD3-201ENST00000238379 ZSCAN12O43309 604 aa16.57■□□□□ 0.24
HDHD3-201ENST00000238379 IRX5P78411 483 aaPredicted RBP16.57■□□□□ 0.24
HDHD3-201ENST00000238379 PPP3CAQ08209 521 aa16.57■□□□□ 0.24
HDHD3-201ENST00000238379 KLHDC7AQ5VTJ3 777 aa16.57■□□□□ 0.24
HDHD3-201ENST00000238379 GPD1LQ8N335 351 aa16.57■□□□□ 0.24
HDHD3-201ENST00000238379 MFSD14AQ96MC6 490 aa16.57■□□□□ 0.24
HDHD3-201ENST00000238379 HAPLN2Q9GZV7 340 aa16.57■□□□□ 0.24
HDHD3-201ENST00000238379 Q9Y3F1 56 aa16.57■□□□□ 0.24
HDHD3-201ENST00000238379 TBC1D8O95759 1140 aa16.56■□□□□ 0.24
HDHD3-201ENST00000238379 F2P00734 622 aa16.56■□□□□ 0.24
HDHD3-201ENST00000238379 CCDC175P0C221 793 aa16.56■□□□□ 0.24
HDHD3-201ENST00000238379 UCHL3P15374 230 aa16.56■□□□□ 0.24
HDHD3-201ENST00000238379 FLT3LGP49771 235 aa16.56■□□□□ 0.24
HDHD3-201ENST00000238379 APLP1P51693 650 aa16.56■□□□□ 0.24
HDHD3-201ENST00000238379 DNTTIP2Q5QJE6 756 aaKnown RBP16.56■□□□□ 0.24
HDHD3-201ENST00000238379 MARCH8Q5T0T0 291 aa16.56■□□□□ 0.24
HDHD3-201ENST00000238379 SLFN12LQ6IEE8 588 aa16.56■□□□□ 0.24
HDHD3-201ENST00000238379 MTHFD1LQ6UB35 978 aa16.56■□□□□ 0.24
HDHD3-201ENST00000238379 ZPBP2Q6X784 338 aa16.56■□□□□ 0.24
HDHD3-201ENST00000238379 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.56■□□□□ 0.24
HDHD3-201ENST00000238379 ZBTB8OSQ8IWT0 167 aa16.56■□□□□ 0.24
HDHD3-201ENST00000238379 TMC2Q8TDI7 906 aa16.56■□□□□ 0.24
HDHD3-201ENST00000238379 PARD3BQ8TEW8 1205 aa16.56■□□□□ 0.24
HDHD3-201ENST00000238379 SYN2Q92777 582 aaPredicted RBP16.56■□□□□ 0.24
HDHD3-201ENST00000238379 ZBTB45Q96K62 511 aaPredicted RBP16.56■□□□□ 0.24
HDHD3-201ENST00000238379 FBXL5Q9UKA1 691 aa16.56■□□□□ 0.24
HDHD3-201ENST00000238379 A0A0B4J269 797 aa16.56■□□□□ 0.24
HDHD3-201ENST00000238379 TTLL13PA6NNM8 815 aa16.56■□□□□ 0.24
HDHD3-201ENST00000238379 KIAA0391O15091 583 aaKnown RBP16.56■□□□□ 0.24
HDHD3-201ENST00000238379 EXTL3O43909 919 aa16.56■□□□□ 0.24
HDHD3-201ENST00000238379 MYL7Q01449 175 aa16.56■□□□□ 0.24
HDHD3-201ENST00000238379 CAP1Q01518 475 aa16.56■□□□□ 0.24
HDHD3-201ENST00000238379 PPFIA1Q13136 1202 aa16.56■□□□□ 0.24
HDHD3-201ENST00000238379 TFDP1Q14186 410 aa16.56■□□□□ 0.24
HDHD3-201ENST00000238379 PTPN14Q15678 1187 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms