RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 TIPINQ9BVW5 301 aa10.73□□□□□ -0.69
TTC1-201ENST00000231238 NRBP2Q9NSY0 501 aa10.73□□□□□ -0.69
TTC1-201ENST00000231238 TAB2Q9NYJ8 693 aa10.73□□□□□ -0.69
TTC1-201ENST00000231238 FRMD3A2A2Y4 597 aa10.72□□□□□ -0.69
TTC1-201ENST00000231238 A6NJY4 79 aa10.72□□□□□ -0.69
TTC1-201ENST00000231238 K7ENM7 598 aa10.72□□□□□ -0.69
TTC1-201ENST00000231238 TOMM70O94826 608 aa10.72□□□□□ -0.69
TTC1-201ENST00000231238 FARP2O94887 1054 aaPredicted RBP10.72□□□□□ -0.69
TTC1-201ENST00000231238 DKK1O94907 266 aa10.72□□□□□ -0.69
TTC1-201ENST00000231238 PTGS1P23219 599 aa10.72□□□□□ -0.69
TTC1-201ENST00000231238 POLGP54098 1239 aaPredicted RBP10.72□□□□□ -0.69
TTC1-201ENST00000231238 PMS1P54277 932 aaKnown RBP10.72□□□□□ -0.69
TTC1-201ENST00000231238 NPEPPSP55786 919 aa10.72□□□□□ -0.69
TTC1-201ENST00000231238 SP2Q02086 613 aa10.72□□□□□ -0.69
TTC1-201ENST00000231238 KRT31Q15323 416 aa10.72□□□□□ -0.69
TTC1-201ENST00000231238 ZNF792Q3KQV3 632 aa10.72□□□□□ -0.69
TTC1-201ENST00000231238 XKR3Q5GH77 459 aa10.72□□□□□ -0.69
TTC1-201ENST00000231238 CDKAL1Q5VV42 579 aa10.72□□□□□ -0.69
TTC1-201ENST00000231238 CENPPQ6IPU0 288 aa10.72□□□□□ -0.69
TTC1-201ENST00000231238 ABHD15Q6UXT9 468 aa10.72□□□□□ -0.69
TTC1-201ENST00000231238 CCDC60Q8IWA6 550 aaPredicted RBP10.72□□□□□ -0.69
TTC1-201ENST00000231238 SYCP3Q8IZU3 236 aa10.72□□□□□ -0.69
TTC1-201ENST00000231238 MED15Q96RN5 788 aa10.72□□□□□ -0.69
TTC1-201ENST00000231238 SH2D3AQ9BRG2 576 aa10.72□□□□□ -0.69
TTC1-201ENST00000231238 COL25A1Q9BXS0 654 aaPredicted RBP10.72□□□□□ -0.69
TTC1-201ENST00000231238 VPS16Q9H269 839 aa10.72□□□□□ -0.69
TTC1-201ENST00000231238 HSD3B7Q9H2F3 369 aa10.72□□□□□ -0.69
TTC1-201ENST00000231238 BCAS3Q9H6U6 928 aa10.72□□□□□ -0.69
TTC1-201ENST00000231238 VTA1Q9NP79 307 aa10.72□□□□□ -0.69
TTC1-201ENST00000231238 IMPACTQ9P2X3 320 aa10.72□□□□□ -0.69
TTC1-201ENST00000231238 ZHX1Q9UKY1 873 aaPredicted RBP10.72□□□□□ -0.69
TTC1-201ENST00000231238 TMEM150BA6NC51 233 aa10.71□□□□□ -0.69
TTC1-201ENST00000231238 TNPO2O14787 897 aaKnown RBP10.71□□□□□ -0.69
TTC1-201ENST00000231238 CETN3O15182 167 aa10.71□□□□□ -0.69
TTC1-201ENST00000231238 TLR2O60603 784 aa10.71□□□□□ -0.69
TTC1-201ENST00000231238 PRPF6O94906 941 aaKnown RBP10.71□□□□□ -0.69
TTC1-201ENST00000231238 THBS1P07996 1170 aa10.71□□□□□ -0.69
TTC1-201ENST00000231238 MYBP10242 640 aa10.71□□□□□ -0.69
TTC1-201ENST00000231238 RPL13P26373 211 aaKnown RBP10.71□□□□□ -0.69
TTC1-201ENST00000231238 TCF7P36402 384 aaPredicted RBP10.71□□□□□ -0.69
TTC1-201ENST00000231238 STAT5BP51692 787 aa10.71□□□□□ -0.69
TTC1-201ENST00000231238 COPB1P53618 953 aaKnown RBP10.71□□□□□ -0.69
TTC1-201ENST00000231238 FKBP3Q00688 224 aaKnown RBP10.71□□□□□ -0.69
TTC1-201ENST00000231238 EHHADHQ08426 723 aa10.71□□□□□ -0.69
TTC1-201ENST00000231238 GRB14Q14449 540 aa10.71□□□□□ -0.69
TTC1-201ENST00000231238 MTERF2Q49AM1 385 aa10.71□□□□□ -0.69
TTC1-201ENST00000231238 CELF3Q5SZQ8 465 aaKnown RBP10.71□□□□□ -0.69
TTC1-201ENST00000231238 FKBP15Q5T1M5 1219 aa10.71□□□□□ -0.69
TTC1-201ENST00000231238 HS2ST1Q7LGA3 356 aa10.71□□□□□ -0.69
TTC1-201ENST00000231238 ZSCAN30Q86W11 494 aa10.71□□□□□ -0.69
TTC1-201ENST00000231238 PPFIBP1Q86W92 1011 aa10.71□□□□□ -0.69
TTC1-201ENST00000231238 CCDC150Q8NCX0 1101 aa10.71□□□□□ -0.69
TTC1-201ENST00000231238 SLC17A8Q8NDX2 589 aa10.71□□□□□ -0.69
TTC1-201ENST00000231238 MCPH1Q8NEM0 835 aa10.71□□□□□ -0.69
TTC1-201ENST00000231238 TPCN2Q8NHX9 752 aa10.71□□□□□ -0.69
TTC1-201ENST00000231238 EEF2KMTQ96G04 330 aa10.71□□□□□ -0.69
TTC1-201ENST00000231238 FAM167AQ96KS9 214 aa10.71□□□□□ -0.69
TTC1-201ENST00000231238 IFT74Q96LB3 600 aa10.71□□□□□ -0.69
TTC1-201ENST00000231238 CNOT6LQ96LI5 555 aaKnown RBP10.71□□□□□ -0.69
TTC1-201ENST00000231238 NAP1L5Q96NT1 182 aaPredicted RBP10.71□□□□□ -0.69
TTC1-201ENST00000231238 SEMA6BQ9H3T3 888 aa10.71□□□□□ -0.69
TTC1-201ENST00000231238 ATP6V0A4Q9HBG4 840 aa10.71□□□□□ -0.69
TTC1-201ENST00000231238 OLFML3Q9NRN5 406 aa10.71□□□□□ -0.69
TTC1-201ENST00000231238 DNAAF2Q9NVR5 837 aaKnown RBP10.71□□□□□ -0.69
TTC1-201ENST00000231238 LIMA1Q9UHB6 759 aaKnown RBP10.71□□□□□ -0.69
TTC1-201ENST00000231238 DDX41Q9UJV9 622 aaKnown RBP10.71□□□□□ -0.69
TTC1-201ENST00000231238 CCDC169A6NNP5 214 aa10.7□□□□□ -0.7
TTC1-201ENST00000231238 EIF3DO15371 548 aaKnown RBP eCLIP10.7□□□□□ -0.7
TTC1-201ENST00000231238 GNA14O95837 355 aa10.7□□□□□ -0.7
TTC1-201ENST00000231238 GH1P01241 217 aa10.7□□□□□ -0.7
TTC1-201ENST00000231238 F11P03951 625 aa10.7□□□□□ -0.7
TTC1-201ENST00000231238 SFPQP23246 707 aaKnown RBP eCLIP10.7□□□□□ -0.7
TTC1-201ENST00000231238 NMT1P30419 496 aaKnown RBP10.7□□□□□ -0.7
TTC1-201ENST00000231238 INSM1Q01101 510 aaPredicted RBP10.7□□□□□ -0.7
TTC1-201ENST00000231238 UBXN1Q04323 297 aa10.7□□□□□ -0.7
TTC1-201ENST00000231238 DMP1Q13316 513 aaPredicted RBP10.7□□□□□ -0.7
TTC1-201ENST00000231238 ALCAMQ13740 583 aa10.7□□□□□ -0.7
TTC1-201ENST00000231238 KNOP1Q1ED39 458 aaKnown RBP10.7□□□□□ -0.7
TTC1-201ENST00000231238 SPECC1LQ69YQ0 1117 aa10.7□□□□□ -0.7
TTC1-201ENST00000231238 CYP4F22Q6NT55 531 aa10.7□□□□□ -0.7
TTC1-201ENST00000231238 ANO5Q75V66 913 aa10.7□□□□□ -0.7
TTC1-201ENST00000231238 GLIS3Q8NEA6 775 aa10.7□□□□□ -0.7
TTC1-201ENST00000231238 SCFD1Q8WVM8 642 aa10.7□□□□□ -0.7
TTC1-201ENST00000231238 SLC7A3Q8WY07 619 aa10.7□□□□□ -0.7
TTC1-201ENST00000231238 KIFAP3Q92845 792 aa10.7□□□□□ -0.7
TTC1-201ENST00000231238 FGD4Q96M96 766 aa10.7□□□□□ -0.7
TTC1-201ENST00000231238 ZNF830Q96NB3 372 aaPredicted RBP10.7□□□□□ -0.7
TTC1-201ENST00000231238 DUSP9Q99956 384 aaKnown RBP10.7□□□□□ -0.7
TTC1-201ENST00000231238 NOC4LQ9BVI4 516 aaKnown RBP10.7□□□□□ -0.7
TTC1-201ENST00000231238 CYP26B1Q9NR63 512 aa10.7□□□□□ -0.7
TTC1-201ENST00000231238 NRBP1Q9UHY1 535 aa10.7□□□□□ -0.7
TTC1-201ENST00000231238 DIS3Q9Y2L1 958 aaKnown RBP10.7□□□□□ -0.7
TTC1-201ENST00000231238 UBE4BO95155 1302 aa10.7□□□□□ -0.7
TTC1-201ENST00000231238 SYNGAP1Q96PV0 1343 aa10.7□□□□□ -0.7
TTC1-201ENST00000231238 IGSF9BQ9UPX0 1349 aa10.7□□□□□ -0.7
TTC1-201ENST00000231238 A0A1B0GTH6 734 aa10.69□□□□□ -0.7
TTC1-201ENST00000231238 CDK2AP1O14519 115 aa10.69□□□□□ -0.7
TTC1-201ENST00000231238 ZNF862O60290 1169 aa10.69□□□□□ -0.7
TTC1-201ENST00000231238 ARIH2O95376 493 aa10.69□□□□□ -0.7
TTC1-201ENST00000231238 PLS3P13797 630 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms