RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 PPP2R5EQ16537 467 aa22.28■■□□□ 1.16
SNX3-201ENST00000230085 PREPLQ4J6C6 727 aaPredicted RBP22.28■■□□□ 1.16
SNX3-201ENST00000230085 WDR78Q5VTH9 848 aa22.28■■□□□ 1.16
SNX3-201ENST00000230085 IRF2BP2Q7Z5L9 587 aa22.28■■□□□ 1.16
SNX3-201ENST00000230085 FBXO11Q86XK2 927 aa22.28■■□□□ 1.16
SNX3-201ENST00000230085 SNX29Q8TEQ0 813 aa22.28■■□□□ 1.16
SNX3-201ENST00000230085 CNOT10Q9H9A5 744 aaKnown RBP22.28■■□□□ 1.16
SNX3-201ENST00000230085 KLC4Q9NSK0 619 aa22.28■■□□□ 1.16
SNX3-201ENST00000230085 STXBP5LQ9Y2K9 1186 aa22.28■■□□□ 1.16
SNX3-201ENST00000230085 CASP8AP2Q9UKL3 1982 aa22.28■■□□□ 1.16
SNX3-201ENST00000230085 EIF3BP55884 814 aaKnown RBP22.27■■□□□ 1.16
SNX3-201ENST00000230085 SKIDA1Q1XH10 827 aa22.27■■□□□ 1.16
SNX3-201ENST00000230085 CD99L2Q8TCZ2 262 aa22.27■■□□□ 1.16
SNX3-201ENST00000230085 LMBR1Q8WVP7 490 aa22.27■■□□□ 1.16
SNX3-201ENST00000230085 AMNQ9BXJ7 453 aa22.27■■□□□ 1.16
SNX3-201ENST00000230085 NLRC4Q9NPP4 1024 aa22.27■■□□□ 1.16
SNX3-201ENST00000230085 BMP2KQ9NSY1 1161 aaPredicted RBP22.27■■□□□ 1.16
SNX3-201ENST00000230085 DIS3Q9Y2L1 958 aaKnown RBP22.27■■□□□ 1.16
SNX3-201ENST00000230085 ZSWIM8A7E2V4 1837 aa22.27■■□□□ 1.16
SNX3-201ENST00000230085 MYO1FO00160 1098 aa22.27■■□□□ 1.16
SNX3-201ENST00000230085 SLC25A27O95847 323 aa22.27■■□□□ 1.16
SNX3-201ENST00000230085 PSMC4P43686 418 aa22.27■■□□□ 1.16
SNX3-201ENST00000230085 CLK2P49760 499 aaKnown RBP22.27■■□□□ 1.16
SNX3-201ENST00000230085 LBX1P52954 281 aa22.27■■□□□ 1.16
SNX3-201ENST00000230085 PPP2R2AP63151 447 aa22.27■■□□□ 1.16
SNX3-201ENST00000230085 DYMQ7RTS9 669 aa22.27■■□□□ 1.16
SNX3-201ENST00000230085 FRMD5Q7Z6J6 570 aa22.27■■□□□ 1.16
SNX3-201ENST00000230085 CCDC65Q8IXS2 484 aa22.27■■□□□ 1.16
SNX3-201ENST00000230085 COA7Q96BR5 231 aa22.27■■□□□ 1.16
SNX3-201ENST00000230085 SLC37A4O43826 429 aa22.26■■□□□ 1.15
SNX3-201ENST00000230085 ADCY7P51828 1080 aa22.26■■□□□ 1.15
SNX3-201ENST00000230085 IFFO1Q0D2I5 559 aa22.26■■□□□ 1.15
SNX3-201ENST00000230085 KCNK18Q7Z418 384 aa22.26■■□□□ 1.15
SNX3-201ENST00000230085 MAATS1Q7Z4T9 603 aa22.26■■□□□ 1.15
SNX3-201ENST00000230085 SYCE1Q8N0S2 351 aa22.26■■□□□ 1.15
SNX3-201ENST00000230085 FAM114A2Q9NRY5 505 aa22.26■■□□□ 1.15
SNX3-201ENST00000230085 PANK4Q9NVE7 773 aa22.26■■□□□ 1.15
SNX3-201ENST00000230085 PCDHA1Q9Y5I3 950 aa22.26■■□□□ 1.15
SNX3-201ENST00000230085 E7EVH7 732 aa22.25■■□□□ 1.15
SNX3-201ENST00000230085 MAPK4P31152 587 aa22.25■■□□□ 1.15
SNX3-201ENST00000230085 CTCFP49711 727 aaPredicted RBP22.25■■□□□ 1.15
SNX3-201ENST00000230085 CLUL1Q15846 466 aa22.25■■□□□ 1.15
SNX3-201ENST00000230085 CCDC121Q6ZUS5 278 aa22.25■■□□□ 1.15
SNX3-201ENST00000230085 GPR142Q7Z601 462 aa22.25■■□□□ 1.15
SNX3-201ENST00000230085 SHCBP1Q8NEM2 672 aa22.25■■□□□ 1.15
SNX3-201ENST00000230085 TATDN2Q93075 761 aa22.25■■□□□ 1.15
SNX3-201ENST00000230085 TLCD1Q96CP7 247 aa22.25■■□□□ 1.15
SNX3-201ENST00000230085 TXLNGYQ9BZA5 131 aa22.25■■□□□ 1.15
SNX3-201ENST00000230085 CXorf56Q9H5V9 222 aa22.25■■□□□ 1.15
SNX3-201ENST00000230085 RNF146Q9NTX7 359 aa22.25■■□□□ 1.15
SNX3-201ENST00000230085 TRAF3IP3Q9Y228 551 aa22.25■■□□□ 1.15
SNX3-201ENST00000230085 MGAMO43451 1857 aa22.25■■□□□ 1.15
SNX3-201ENST00000230085 SART1O43290 800 aaKnown RBP22.25■■□□□ 1.15
SNX3-201ENST00000230085 CCDC172P0C7W6 258 aa22.25■■□□□ 1.15
SNX3-201ENST00000230085 SEC24CP53992 1094 aa22.25■■□□□ 1.15
SNX3-201ENST00000230085 XRCC4Q13426 336 aa22.25■■□□□ 1.15
SNX3-201ENST00000230085 RAPGEF1Q13905 1077 aa22.25■■□□□ 1.15
SNX3-201ENST00000230085 KIF22Q14807 665 aa22.25■■□□□ 1.15
SNX3-201ENST00000230085 TPCN2Q8NHX9 752 aa22.25■■□□□ 1.15
SNX3-201ENST00000230085 KDM4CQ9H3R0 1056 aa22.25■■□□□ 1.15
SNX3-201ENST00000230085 MROH8Q9H579 483 aa22.25■■□□□ 1.15
SNX3-201ENST00000230085 RABEP2Q9H5N1 569 aa22.25■■□□□ 1.15
SNX3-201ENST00000230085 DDX20Q9UHI6 824 aaKnown RBP22.25■■□□□ 1.15
SNX3-201ENST00000230085 ADAMTS1Q9UHI8 967 aa22.25■■□□□ 1.15
SNX3-201ENST00000230085 NAGPAQ9UK23 515 aa22.25■■□□□ 1.15
SNX3-201ENST00000230085 GTPBP10A4D1E9 387 aaKnown RBP22.24■■□□□ 1.15
SNX3-201ENST00000230085 KCNK3O14649 394 aa22.24■■□□□ 1.15
SNX3-201ENST00000230085 POU5F1Q01860 360 aaKnown RBP22.24■■□□□ 1.15
SNX3-201ENST00000230085 TMC3Q7Z5M5 1100 aa22.24■■□□□ 1.15
SNX3-201ENST00000230085 CCDC26Q8TAB7 109 aa22.24■■□□□ 1.15
SNX3-201ENST00000230085 BIN2Q9UBW5 565 aaPredicted RBP22.24■■□□□ 1.15
SNX3-201ENST00000230085 DAAM1Q9Y4D1 1078 aa22.24■■□□□ 1.15
SNX3-201ENST00000230085 HTTP42858 3142 aa22.24■■□□□ 1.15
SNX3-201ENST00000230085 NFIBO00712 420 aa22.23■■□□□ 1.15
SNX3-201ENST00000230085 TNPO2O14787 897 aaKnown RBP22.23■■□□□ 1.15
SNX3-201ENST00000230085 KIF1CO43896 1103 aaKnown RBP22.23■■□□□ 1.15
SNX3-201ENST00000230085 PPFIA2O75334 1257 aa22.23■■□□□ 1.15
SNX3-201ENST00000230085 CTNNA1P35221 906 aaKnown RBP22.23■■□□□ 1.15
SNX3-201ENST00000230085 FCGRTP55899 365 aa22.23■■□□□ 1.15
SNX3-201ENST00000230085 IFT88Q13099 833 aa22.23■■□□□ 1.15
SNX3-201ENST00000230085 GLIS3Q8NEA6 775 aa22.23■■□□□ 1.15
SNX3-201ENST00000230085 CHST13Q8NET6 341 aa22.23■■□□□ 1.15
SNX3-201ENST00000230085 CLEC4DQ8WXI8 215 aa22.23■■□□□ 1.15
SNX3-201ENST00000230085 SGSM3Q96HU1 749 aa22.23■■□□□ 1.15
SNX3-201ENST00000230085 NUDT12Q9BQG2 462 aa22.23■■□□□ 1.15
SNX3-201ENST00000230085 SLC40A1Q9NP59 571 aa22.23■■□□□ 1.15
SNX3-201ENST00000230085 PNMA2Q9UL42 364 aa22.23■■□□□ 1.15
SNX3-201ENST00000230085 POTEMA6NI47 508 aa22.22■■□□□ 1.15
SNX3-201ENST00000230085 CETN3O15182 167 aa22.22■■□□□ 1.15
SNX3-201ENST00000230085 DNAJC8O75937 253 aaPredicted RBP22.22■■□□□ 1.15
SNX3-201ENST00000230085 TDP2O95551 362 aa22.22■■□□□ 1.15
SNX3-201ENST00000230085 CDR1P51861 262 aa22.22■■□□□ 1.15
SNX3-201ENST00000230085 PTK2Q05397 1052 aa22.22■■□□□ 1.15
SNX3-201ENST00000230085 NEDD9Q14511 834 aa22.22■■□□□ 1.15
SNX3-201ENST00000230085 TRADDQ15628 312 aa22.22■■□□□ 1.15
SNX3-201ENST00000230085 TKFCQ3LXA3 575 aa22.22■■□□□ 1.15
SNX3-201ENST00000230085 ANKRD20A8PQ5CZ79 823 aa22.22■■□□□ 1.15
SNX3-201ENST00000230085 PLEKHH3Q7Z736 793 aa22.22■■□□□ 1.15
SNX3-201ENST00000230085 CROCCP2Q86T23 111 aa22.22■■□□□ 1.15
SNX3-201ENST00000230085 SCFD1Q8WVM8 642 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms