RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 SPDYE3A6NKU9 549 aa10.15□□□□□ -0.79
HLA-DOA-201ENST00000229829 H0Y3Z8 333 aa10.15□□□□□ -0.79
HLA-DOA-201ENST00000229829 HOXA10P31260 410 aaPredicted RBP10.15□□□□□ -0.79
HLA-DOA-201ENST00000229829 SESN3P58005 492 aa10.15□□□□□ -0.79
HLA-DOA-201ENST00000229829 ELF3P78545 371 aaPredicted RBP10.15□□□□□ -0.79
HLA-DOA-201ENST00000229829 DHX9Q08211 1270 aaKnown RBP10.15□□□□□ -0.79
HLA-DOA-201ENST00000229829 IFI16Q16666 785 aaKnown RBP10.15□□□□□ -0.79
HLA-DOA-201ENST00000229829 TPH2Q8IWU9 490 aa10.15□□□□□ -0.79
HLA-DOA-201ENST00000229829 RASGEF1CQ8N431 466 aa10.15□□□□□ -0.79
HLA-DOA-201ENST00000229829 ANKS4BQ8N8V4 417 aa10.15□□□□□ -0.79
HLA-DOA-201ENST00000229829 RDH13Q8NBN7 331 aa10.15□□□□□ -0.79
HLA-DOA-201ENST00000229829 ERMNQ8TAM6 284 aa10.15□□□□□ -0.79
HLA-DOA-201ENST00000229829 AGAP11Q8TF27 550 aa10.15□□□□□ -0.79
HLA-DOA-201ENST00000229829 HES6Q96HZ4 224 aa10.15□□□□□ -0.79
HLA-DOA-201ENST00000229829 NAP1L4Q99733 375 aaKnown RBP10.15□□□□□ -0.79
HLA-DOA-201ENST00000229829 COA1Q9GZY4 146 aa10.15□□□□□ -0.79
HLA-DOA-201ENST00000229829 ERVK-5Q9HDB9 667 aa10.15□□□□□ -0.79
HLA-DOA-201ENST00000229829 RABGAP1Q9Y3P9 1069 aa10.15□□□□□ -0.79
HLA-DOA-201ENST00000229829 TBCAO75347 108 aaKnown RBP10.14□□□□□ -0.79
HLA-DOA-201ENST00000229829 CTCFP49711 727 aaPredicted RBP10.14□□□□□ -0.79
HLA-DOA-201ENST00000229829 DRAP1Q14919 205 aaPredicted RBP10.14□□□□□ -0.79
HLA-DOA-201ENST00000229829 Q4G0T1 1027 aa10.14□□□□□ -0.79
HLA-DOA-201ENST00000229829 MYCT1Q8N699 235 aa10.14□□□□□ -0.79
HLA-DOA-201ENST00000229829 SLC30A5Q8TAD4 765 aa10.14□□□□□ -0.79
HLA-DOA-201ENST00000229829 GLG1Q92896 1179 aa10.14□□□□□ -0.79
HLA-DOA-201ENST00000229829 AMNQ9BXJ7 453 aa10.14□□□□□ -0.79
HLA-DOA-201ENST00000229829 DBNDD1Q9H9R9 158 aa10.14□□□□□ -0.79
HLA-DOA-201ENST00000229829 TMEM165Q9HC07 324 aa10.14□□□□□ -0.79
HLA-DOA-201ENST00000229829 SUCLA2Q9P2R7 463 aaPredicted RBP10.14□□□□□ -0.79
HLA-DOA-201ENST00000229829 DNAJC12Q9UKB3 198 aa10.14□□□□□ -0.79
HLA-DOA-201ENST00000229829 F8VZ95 297 aa10.14□□□□□ -0.79
HLA-DOA-201ENST00000229829 POU5F1Q01860 360 aaKnown RBP10.14□□□□□ -0.79
HLA-DOA-201ENST00000229829 AP3B2Q13367 1082 aa10.14□□□□□ -0.79
HLA-DOA-201ENST00000229829 ARHGAP44Q17R89 818 aa10.14□□□□□ -0.79
HLA-DOA-201ENST00000229829 UBAP2Q5T6F2 1119 aaKnown RBP10.14□□□□□ -0.79
HLA-DOA-201ENST00000229829 FAM47EQ6ZV65 393 aa10.14□□□□□ -0.79
HLA-DOA-201ENST00000229829 TMC3Q7Z5M5 1100 aa10.14□□□□□ -0.79
HLA-DOA-201ENST00000229829 LONP2Q86WA8 852 aa10.14□□□□□ -0.79
HLA-DOA-201ENST00000229829 FBXO11Q86XK2 927 aa10.14□□□□□ -0.79
HLA-DOA-201ENST00000229829 FAM186BQ8IYM0 893 aa10.14□□□□□ -0.79
HLA-DOA-201ENST00000229829 CCDC197Q8NCU1 140 aa10.14□□□□□ -0.79
HLA-DOA-201ENST00000229829 TEKT1Q969V4 418 aa10.14□□□□□ -0.79
HLA-DOA-201ENST00000229829 LRRC45Q96CN5 670 aa10.14□□□□□ -0.79
HLA-DOA-201ENST00000229829 HOOK2Q96ED9 719 aa10.14□□□□□ -0.79
HLA-DOA-201ENST00000229829 GPR88Q9GZN0 384 aa10.14□□□□□ -0.79
HLA-DOA-201ENST00000229829 SEPT11Q9NVA2 429 aaKnown RBP10.14□□□□□ -0.79
HLA-DOA-201ENST00000229829 C15orf41Q9Y2V0 281 aa10.14□□□□□ -0.79
HLA-DOA-201ENST00000229829 hCG_2014768A0A024R1R8 64 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 A8MUI8 341 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 RPL13P26373 211 aaKnown RBP10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 ZNF76P36508 570 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 SREBF1P36956 1147 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 STAT1P42224 750 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 CRKP46108 304 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 CYP2J2P51589 502 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 LAMB3Q13751 1172 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 BMT2Q1RMZ1 405 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 LRIG3Q6UXM1 1119 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 SLC17A8Q8NDX2 589 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 MKL1Q969V6 931 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 PAIP2Q9BPZ3 127 aaKnown RBP10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 METTL14Q9HCE5 456 aaKnown RBP10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 FAM198AQ9UFP1 575 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 AMFRQ9UKV5 643 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 COG5Q9UP83 839 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 ATP8A1Q9Y2Q0 1164 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 GREB1LQ9C091 1923 aaPredicted RBP10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 DDX3YO15523 660 aaKnown RBP10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 SLITRK3O94933 977 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 NDUFB10O96000 172 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 SOX5P35711 763 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 RPS6KA3P51812 740 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 ICA1Q05084 483 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 TRAF1Q13077 416 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 PLS1Q14651 629 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 MOXD1Q6UVY6 613 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 VPS36Q86VN1 386 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 SP8Q8IXZ3 490 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 C1orf131Q8NDD1 294 aaKnown RBP10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 ATP8B4Q8TF62 1192 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 RAPGEF5Q92565 580 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 DYDC2Q96IM9 177 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 CRAMP1Q96RY5 1269 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 THAP2Q9H0W7 228 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 MLXIPLQ9NP71 852 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 TMOD4Q9NZQ9 345 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 SAMD15Q9P1V8 674 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 WRAP73Q9P2S5 460 aaPredicted RBP10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 PHIPQ8WWQ0 1821 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 CCDC188H7C350 402 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 POLRMTO00411 1230 aaKnown RBP10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 EYA4O95677 639 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 FERP16591 822 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 CNGA1P29973 690 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 FMO5P49326 533 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 NBPF9Q3BBW0 867 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 B4GALNT2Q8NHY0 566 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 DCAF4Q8WV16 495 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 CCDC17Q96LX7 622 aa10.13□□□□□ -0.79
HLA-DOA-201ENST00000229829 WDR18Q9BV38 432 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms