RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 ALCAMQ13740 583 aa17.58■□□□□ 0.4
LTBR-201ENST00000228918 MSL1Q68DK7 614 aa17.58■□□□□ 0.4
LTBR-201ENST00000228918 LDHDQ86WU2 507 aa17.58■□□□□ 0.4
LTBR-201ENST00000228918 JAMLQ86YT9 394 aa17.58■□□□□ 0.4
LTBR-201ENST00000228918 C12orf56Q8IXR9 622 aa17.58■□□□□ 0.4
LTBR-201ENST00000228918 PCIF1Q9H4Z3 704 aa17.58■□□□□ 0.4
LTBR-201ENST00000228918 LRRC4CQ9HCJ2 640 aa17.58■□□□□ 0.4
LTBR-201ENST00000228918 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.58■□□□□ 0.4
LTBR-201ENST00000228918 TMOD2Q9NZR1 351 aa17.58■□□□□ 0.4
LTBR-201ENST00000228918 LARSQ9P2J5 1176 aaKnown RBP17.58■□□□□ 0.4
LTBR-201ENST00000228918 BCS1LQ9Y276 419 aa17.58■□□□□ 0.4
LTBR-201ENST00000228918 ATP8A1Q9Y2Q0 1164 aa17.58■□□□□ 0.4
LTBR-201ENST00000228918 YDJCA8MPS7 323 aa17.57■□□□□ 0.4
LTBR-201ENST00000228918 DCDC2CA8MYV0 355 aa17.57■□□□□ 0.4
LTBR-201ENST00000228918 H0YIN7 160 aa17.57■□□□□ 0.4
LTBR-201ENST00000228918 TRAPPC3O43617 180 aa17.57■□□□□ 0.4
LTBR-201ENST00000228918 ITGB5P18084 799 aa17.57■□□□□ 0.4
LTBR-201ENST00000228918 EIF3BP55884 814 aaKnown RBP17.57■□□□□ 0.4
LTBR-201ENST00000228918 C1orf220Q5T0J3 134 aa17.57■□□□□ 0.4
LTBR-201ENST00000228918 MIER3Q7Z3K6 550 aa17.57■□□□□ 0.4
LTBR-201ENST00000228918 FAM160B2Q86V87 743 aa17.57■□□□□ 0.4
LTBR-201ENST00000228918 C3orf20Q8ND61 904 aa17.57■□□□□ 0.4
LTBR-201ENST00000228918 CYFIP2Q96F07 1278 aa17.57■□□□□ 0.4
LTBR-201ENST00000228918 CBWD1Q9BRT8 395 aa17.57■□□□□ 0.4
LTBR-201ENST00000228918 DEFB129Q9H1M3 183 aa17.57■□□□□ 0.4
LTBR-201ENST00000228918 CTTNBP2NLQ9P2B4 639 aa17.57■□□□□ 0.4
LTBR-201ENST00000228918 PHF2O75151 1096 aa17.56■□□□□ 0.4
LTBR-201ENST00000228918 FSBPO95073 299 aa17.56■□□□□ 0.4
LTBR-201ENST00000228918 FTLP02792 175 aaPredicted RBP17.56■□□□□ 0.4
LTBR-201ENST00000228918 TMOD1P28289 359 aa17.56■□□□□ 0.4
LTBR-201ENST00000228918 MAGOHP61326 146 aaKnown RBP17.56■□□□□ 0.4
LTBR-201ENST00000228918 CETN1Q12798 172 aa17.56■□□□□ 0.4
LTBR-201ENST00000228918 ODF2Q5BJF6 829 aa17.56■□□□□ 0.4
LTBR-201ENST00000228918 MAEAQ7L5Y9 396 aa17.56■□□□□ 0.4
LTBR-201ENST00000228918 GLG1Q92896 1179 aa17.56■□□□□ 0.4
LTBR-201ENST00000228918 MAGOHBQ96A72 148 aaKnown RBP17.56■□□□□ 0.4
LTBR-201ENST00000228918 EPB41L4BQ9H329 900 aa17.56■□□□□ 0.4
LTBR-201ENST00000228918 QTRT2Q9H974 415 aaKnown RBP17.56■□□□□ 0.4
LTBR-201ENST00000228918 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.56■□□□□ 0.4
LTBR-201ENST00000228918 GMNCA6NCL1 334 aa17.56■□□□□ 0.4
LTBR-201ENST00000228918 SPDYE2BA6NHP3 402 aa17.56■□□□□ 0.4
LTBR-201ENST00000228918 SPDYE6P0CI01 402 aa17.56■□□□□ 0.4
LTBR-201ENST00000228918 GCLMP48507 274 aa17.56■□□□□ 0.4
LTBR-201ENST00000228918 FNTAP49354 379 aa17.56■□□□□ 0.4
LTBR-201ENST00000228918 ZYXQ15942 572 aaKnown RBP17.56■□□□□ 0.4
LTBR-201ENST00000228918 GRIPAP1Q4V328 841 aa17.56■□□□□ 0.4
LTBR-201ENST00000228918 AADACL2Q6P093 401 aa17.56■□□□□ 0.4
LTBR-201ENST00000228918 RPUSD2Q8IZ73 545 aaKnown RBP17.56■□□□□ 0.4
LTBR-201ENST00000228918 UBL4BQ8N7F7 174 aa17.56■□□□□ 0.4
LTBR-201ENST00000228918 KRT35Q92764 455 aa17.56■□□□□ 0.4
LTBR-201ENST00000228918 TLCD1Q96CP7 247 aa17.56■□□□□ 0.4
LTBR-201ENST00000228918 ACCSQ96QU6 501 aa17.56■□□□□ 0.4
LTBR-201ENST00000228918 ZSWIM1Q9BR11 485 aa17.56■□□□□ 0.4
LTBR-201ENST00000228918 FBXO28Q9NVF7 368 aa17.56■□□□□ 0.4
LTBR-201ENST00000228918 CLRN2A0PK11 232 aa17.55■□□□□ 0.4
LTBR-201ENST00000228918 KIAA0391O15091 583 aaKnown RBP17.55■□□□□ 0.4
LTBR-201ENST00000228918 P4HBP07237 508 aaKnown RBP17.55■□□□□ 0.4
LTBR-201ENST00000228918 HSPA6P17066 643 aa17.55■□□□□ 0.4
LTBR-201ENST00000228918 MARCKSL1P49006 195 aa17.55■□□□□ 0.4
LTBR-201ENST00000228918 HSD17B4P51659 736 aa17.55■□□□□ 0.4
LTBR-201ENST00000228918 DRG2P55039 364 aaKnown RBP17.55■□□□□ 0.4
LTBR-201ENST00000228918 IFFO1Q0D2I5 559 aa17.55■□□□□ 0.4
LTBR-201ENST00000228918 SAMD1Q6SPF0 538 aaPredicted RBP17.55■□□□□ 0.4
LTBR-201ENST00000228918 C6orf89Q6UWU4 347 aa17.55■□□□□ 0.4
LTBR-201ENST00000228918 ZDHHC24Q6UX98 284 aa17.55■□□□□ 0.4
LTBR-201ENST00000228918 CNPY4Q8N129 248 aa17.55■□□□□ 0.4
LTBR-201ENST00000228918 FLAD1Q8NFF5 587 aa17.55■□□□□ 0.4
LTBR-201ENST00000228918 PLEKHO2Q8TD55 490 aa17.55■□□□□ 0.4
LTBR-201ENST00000228918 FAM151AQ8WW52 585 aa17.55■□□□□ 0.4
LTBR-201ENST00000228918 CEP89Q96ST8 783 aa17.55■□□□□ 0.4
LTBR-201ENST00000228918 PSMD1Q99460 953 aa17.55■□□□□ 0.4
LTBR-201ENST00000228918 KCNH7Q9NS40 1196 aa17.55■□□□□ 0.4
LTBR-201ENST00000228918 PKD2L1Q9P0L9 805 aa17.55■□□□□ 0.4
LTBR-201ENST00000228918 RASAL2Q9UJF2 1139 aa17.55■□□□□ 0.4
LTBR-201ENST00000228918 DBR1Q9UK59 544 aaKnown RBP17.55■□□□□ 0.4
LTBR-201ENST00000228918 CAPN7Q9Y6W3 813 aa17.55■□□□□ 0.4
LTBR-201ENST00000228918 RPTORQ8N122 1335 aa17.55■□□□□ 0.4
LTBR-201ENST00000228918 NUDT17P0C025 328 aa17.55■□□□□ 0.4
LTBR-201ENST00000228918 PTGIRP43119 386 aa17.55■□□□□ 0.4
LTBR-201ENST00000228918 RARRES1P49788 294 aa17.55■□□□□ 0.4
LTBR-201ENST00000228918 GPC5P78333 572 aa17.55■□□□□ 0.4
LTBR-201ENST00000228918 FBXW10Q5XX13 1052 aa17.55■□□□□ 0.4
LTBR-201ENST00000228918 XXYLT1Q8NBI6 393 aa17.55■□□□□ 0.4
LTBR-201ENST00000228918 HSPBP1Q9NZL4 362 aa17.55■□□□□ 0.4
LTBR-201ENST00000228918 FEM1BQ9UK73 627 aa17.55■□□□□ 0.4
LTBR-201ENST00000228918 ZHX2Q9Y6X8 837 aa17.55■□□□□ 0.4
LTBR-201ENST00000228918 CNTNAP1P78357 1384 aa17.54■□□□□ 0.4
LTBR-201ENST00000228918 MAPK13O15264 365 aa17.54■□□□□ 0.4
LTBR-201ENST00000228918 DHX15O43143 795 aaKnown RBP17.54■□□□□ 0.4
LTBR-201ENST00000228918 RTN2O75298 545 aa17.54■□□□□ 0.4
LTBR-201ENST00000228918 MTA2O94776 668 aa17.54■□□□□ 0.4
LTBR-201ENST00000228918 PLS3P13797 630 aa17.54■□□□□ 0.4
LTBR-201ENST00000228918 CHRNA3P32297 505 aa17.54■□□□□ 0.4
LTBR-201ENST00000228918 PPARDQ03181 441 aa17.54■□□□□ 0.4
LTBR-201ENST00000228918 ZNF746Q6NUN9 644 aaPredicted RBP17.54■□□□□ 0.4
LTBR-201ENST00000228918 PRELID2Q8N945 189 aa17.54■□□□□ 0.4
LTBR-201ENST00000228918 PRPF38AQ8NAV1 312 aaKnown RBP17.54■□□□□ 0.4
LTBR-201ENST00000228918 ZSWIM2Q8NEG5 633 aa17.54■□□□□ 0.4
LTBR-201ENST00000228918 EPS8L1Q8TE68 723 aa17.54■□□□□ 0.4
LTBR-201ENST00000228918 C7orf43Q8WVR3 580 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms