RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 GNG11P61952 73 aa16.21■□□□□ 0.19
CCDC47-201ENST00000225726 MORN1Q5T089 497 aa16.21■□□□□ 0.19
CCDC47-201ENST00000225726 ZSWIM2Q8NEG5 633 aa16.21■□□□□ 0.19
CCDC47-201ENST00000225726 NPLOC4Q8TAT6 608 aa16.21■□□□□ 0.19
CCDC47-201ENST00000225726 ATRIPQ8WXE1 791 aa16.21■□□□□ 0.19
CCDC47-201ENST00000225726 POMGNT1Q8WZA1 660 aa16.21■□□□□ 0.19
CCDC47-201ENST00000225726 FBXL18Q96ME1 805 aa16.21■□□□□ 0.19
CCDC47-201ENST00000225726 FHOD1Q9Y613 1164 aa16.21■□□□□ 0.19
CCDC47-201ENST00000225726 PLEKP08567 350 aaPredicted RBP16.21■□□□□ 0.18
CCDC47-201ENST00000225726 ADCYAP1R1P41586 468 aa16.21■□□□□ 0.18
CCDC47-201ENST00000225726 ARHGAP25P42331 645 aa16.21■□□□□ 0.18
CCDC47-201ENST00000225726 RAPGEF1Q13905 1077 aa16.21■□□□□ 0.18
CCDC47-201ENST00000225726 SNRNP35Q16560 246 aaKnown RBP16.21■□□□□ 0.18
CCDC47-201ENST00000225726 SLC9C1Q4G0N8 1177 aa16.21■□□□□ 0.18
CCDC47-201ENST00000225726 HGSNATQ68CP4 663 aa16.21■□□□□ 0.18
CCDC47-201ENST00000225726 IFNL1Q8IU54 200 aa16.21■□□□□ 0.18
CCDC47-201ENST00000225726 ABHD16BQ9H3Z7 469 aa16.21■□□□□ 0.18
CCDC47-201ENST00000225726 ERAP1Q9NZ08 941 aa16.21■□□□□ 0.18
CCDC47-201ENST00000225726 TRPC6Q9Y210 931 aa16.21■□□□□ 0.18
CCDC47-201ENST00000225726 KIF5CO60282 957 aa16.2■□□□□ 0.18
CCDC47-201ENST00000225726 LCA5LO95447 670 aa16.2■□□□□ 0.18
CCDC47-201ENST00000225726 ADRB2P07550 413 aa16.2■□□□□ 0.18
CCDC47-201ENST00000225726 ENPEPQ07075 957 aa16.2■□□□□ 0.18
CCDC47-201ENST00000225726 CAPSQ13938 189 aa16.2■□□□□ 0.18
CCDC47-201ENST00000225726 ASIC2Q16515 512 aa16.2■□□□□ 0.18
CCDC47-201ENST00000225726 INTS2Q9H0H0 1204 aaKnown RBP16.2■□□□□ 0.18
CCDC47-201ENST00000225726 DEF6Q9H4E7 631 aa16.2■□□□□ 0.18
CCDC47-201ENST00000225726 TLL2Q9Y6L7 1015 aa16.2■□□□□ 0.18
CCDC47-201ENST00000225726 GOLGA8IPA6NC78 632 aa16.2■□□□□ 0.18
CCDC47-201ENST00000225726 GOLGA8JA6NMD2 632 aa16.2■□□□□ 0.18
CCDC47-201ENST00000225726 TLR2O60603 784 aa16.2■□□□□ 0.18
CCDC47-201ENST00000225726 GTF2F1P35269 517 aaKnown RBP eCLIP16.2■□□□□ 0.181e-17■□□□□ 10.8
CCDC47-201ENST00000225726 LIG4P49917 911 aa16.2■□□□□ 0.18
CCDC47-201ENST00000225726 KIF11P52732 1056 aa16.2■□□□□ 0.18
CCDC47-201ENST00000225726 GJC2Q5T442 439 aaPredicted RBP16.2■□□□□ 0.18
CCDC47-201ENST00000225726 SAAL1Q96ER3 474 aa16.2■□□□□ 0.18
CCDC47-201ENST00000225726 HAUS4Q9H6D7 363 aa16.2■□□□□ 0.18
CCDC47-201ENST00000225726 STYXL1Q9Y6J8 313 aa16.2■□□□□ 0.18
CCDC47-201ENST00000225726 KIAA0391O15091 583 aaKnown RBP16.2■□□□□ 0.18
CCDC47-201ENST00000225726 PMM2O15305 246 aa16.2■□□□□ 0.18
CCDC47-201ENST00000225726 LGALS2P05162 132 aa16.2■□□□□ 0.18
CCDC47-201ENST00000225726 CASQ1P31415 396 aa16.2■□□□□ 0.18
CCDC47-201ENST00000225726 DLG4P78352 724 aa16.2■□□□□ 0.18
CCDC47-201ENST00000225726 MAP2K5Q13163 448 aa16.2■□□□□ 0.18
CCDC47-201ENST00000225726 ACVR2BQ13705 512 aa16.2■□□□□ 0.18
CCDC47-201ENST00000225726 SPA17Q15506 151 aa16.2■□□□□ 0.18
CCDC47-201ENST00000225726 C1orf220Q5T0J3 134 aa16.2■□□□□ 0.18
CCDC47-201ENST00000225726 CBWD2Q8IUF1 395 aa16.2■□□□□ 0.18
CCDC47-201ENST00000225726 GPD1LQ8N335 351 aa16.2■□□□□ 0.18
CCDC47-201ENST00000225726 TMC2Q8TDI7 906 aa16.2■□□□□ 0.18
CCDC47-201ENST00000225726 SPAG5Q96R06 1193 aa16.2■□□□□ 0.18
CCDC47-201ENST00000225726 K7ERI5 159 aa16.19■□□□□ 0.18
CCDC47-201ENST00000225726 ADCY3O60266 1144 aa16.19■□□□□ 0.18
CCDC47-201ENST00000225726 JAM2P57087 298 aa16.19■□□□□ 0.18
CCDC47-201ENST00000225726 CETN1Q12798 172 aa16.19■□□□□ 0.18
CCDC47-201ENST00000225726 MXD4Q14582 209 aaPredicted RBP16.19■□□□□ 0.18
CCDC47-201ENST00000225726 KIAA1328Q86T90 577 aa16.19■□□□□ 0.18
CCDC47-201ENST00000225726 PLEKHO2Q8TD55 490 aa16.19■□□□□ 0.18
CCDC47-201ENST00000225726 PRPF31Q8WWY3 499 aaKnown RBP16.19■□□□□ 0.18
CCDC47-201ENST00000225726 MFSD14AQ96MC6 490 aa16.19■□□□□ 0.18
CCDC47-201ENST00000225726 MYO1AQ9UBC5 1043 aa16.19■□□□□ 0.18
CCDC47-201ENST00000225726 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.19■□□□□ 0.18
CCDC47-201ENST00000225726 IRF5Q13568 498 aa16.19■□□□□ 0.18
CCDC47-201ENST00000225726 ASTE1Q2TB18 679 aaPredicted RBP16.19■□□□□ 0.18
CCDC47-201ENST00000225726 DUSP28Q4G0W2 176 aa16.19■□□□□ 0.18
CCDC47-201ENST00000225726 TDRD12Q587J7 1177 aaKnown RBP16.19■□□□□ 0.18
CCDC47-201ENST00000225726 ZNF484Q5JVG2 852 aa16.19■□□□□ 0.18
CCDC47-201ENST00000225726 IQSEC1Q6DN90 963 aa16.19■□□□□ 0.18
CCDC47-201ENST00000225726 C17orf99Q6UX52 265 aa16.19■□□□□ 0.18
CCDC47-201ENST00000225726 PSPC1Q8WXF1 523 aaKnown RBP16.19■□□□□ 0.18
CCDC47-201ENST00000225726 WDR24Q96S15 920 aa16.19■□□□□ 0.18
CCDC47-201ENST00000225726 KIAA1586Q9HCI6 787 aa16.19■□□□□ 0.18
CCDC47-201ENST00000225726 EFNA5P52803 228 aa16.18■□□□□ 0.18
CCDC47-201ENST00000225726 IQCEQ6IPM2 695 aa16.18■□□□□ 0.18
CCDC47-201ENST00000225726 EHBP1Q8NDI1 1231 aa16.18■□□□□ 0.18
CCDC47-201ENST00000225726 AFG1LQ8WV93 481 aa16.18■□□□□ 0.18
CCDC47-201ENST00000225726 AKR1B10O60218 316 aa16.18■□□□□ 0.18
CCDC47-201ENST00000225726 RFX1P22670 979 aa16.18■□□□□ 0.18
CCDC47-201ENST00000225726 PPP3CAQ08209 521 aa16.18■□□□□ 0.18
CCDC47-201ENST00000225726 MKRN4PQ13434 485 aaPredicted RBP16.18■□□□□ 0.18
CCDC47-201ENST00000225726 DRP2Q13474 957 aa16.18■□□□□ 0.18
CCDC47-201ENST00000225726 CDCA2Q69YH5 1023 aaPredicted RBP16.18■□□□□ 0.18
CCDC47-201ENST00000225726 SLFN12LQ6IEE8 588 aa16.18■□□□□ 0.18
CCDC47-201ENST00000225726 USP37Q86T82 979 aa16.18■□□□□ 0.18
CCDC47-201ENST00000225726 JAKMIP2Q96AA8 810 aa16.18■□□□□ 0.18
CCDC47-201ENST00000225726 FAM155AB1AL88 458 aaPredicted RBP16.18■□□□□ 0.18
CCDC47-201ENST00000225726 FANCGO15287 622 aa16.18■□□□□ 0.18
CCDC47-201ENST00000225726 SMPD1P17405 629 aa16.18■□□□□ 0.18
CCDC47-201ENST00000225726 VAV2P52735 878 aa16.18■□□□□ 0.18
CCDC47-201ENST00000225726 CYP24A1Q07973 514 aa16.18■□□□□ 0.18
CCDC47-201ENST00000225726 LAMTOR4Q0VGL1 99 aa16.18■□□□□ 0.18
CCDC47-201ENST00000225726 SREBF2Q12772 1141 aa16.18■□□□□ 0.18
CCDC47-201ENST00000225726 CCDC102AQ96A19 550 aa16.18■□□□□ 0.18
CCDC47-201ENST00000225726 SUGCTQ9HAC7 445 aa16.18■□□□□ 0.18
CCDC47-201ENST00000225726 ZFYVE28Q9HCC9 887 aa16.18■□□□□ 0.18
CCDC47-201ENST00000225726 BZW2Q9Y6E2 419 aaKnown RBP16.18■□□□□ 0.18
CCDC47-201ENST00000225726 ZNF263O14978 683 aa16.17■□□□□ 0.18
CCDC47-201ENST00000225726 EXTL3O43909 919 aa16.17■□□□□ 0.18
CCDC47-201ENST00000225726 KLHL30Q0D2K2 578 aa16.17■□□□□ 0.18
CCDC47-201ENST00000225726 EPC2Q52LR7 807 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms