RNA–Protein interactions for RNA: ENST00000225603.8

CBX1-201, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-201ENST00000225603 ADSSP30520 456 aa19.74■□□□□ 0.75
CBX1-201ENST00000225603 MTIF2P46199 727 aaKnown RBP19.74■□□□□ 0.75
CBX1-201ENST00000225603 NFRKBQ6P4R8 1299 aa19.74■□□□□ 0.75
CBX1-201ENST00000225603 KIAA0319LQ8IZA0 1049 aa19.74■□□□□ 0.75
CBX1-201ENST00000225603 CCDC112Q8NEF3 446 aa19.74■□□□□ 0.75
CBX1-201ENST00000225603 ZSWIM2Q8NEG5 633 aa19.74■□□□□ 0.75
CBX1-201ENST00000225603 PCIF1Q9H4Z3 704 aa19.74■□□□□ 0.75
CBX1-201ENST00000225603 KAT6AQ92794 2004 aa19.74■□□□□ 0.75
CBX1-201ENST00000225603 PRKCSHP14314 528 aaPredicted RBP19.74■□□□□ 0.75
CBX1-201ENST00000225603 RPL13P26373 211 aaKnown RBP19.74■□□□□ 0.75
CBX1-201ENST00000225603 MIIPQ5JXC2 388 aa19.74■□□□□ 0.75
CBX1-201ENST00000225603 LHX8Q68G74 356 aa19.74■□□□□ 0.75
CBX1-201ENST00000225603 CDCA2Q69YH5 1023 aaPredicted RBP19.74■□□□□ 0.75
CBX1-201ENST00000225603 ANKRD20A12PQ8NF67 263 aa19.74■□□□□ 0.75
CBX1-201ENST00000225603 KCNN1Q92952 543 aa19.74■□□□□ 0.75
CBX1-201ENST00000225603 KATNAL1Q9BW62 490 aa19.74■□□□□ 0.75
CBX1-201ENST00000225603 TMX1Q9H3N1 280 aa19.74■□□□□ 0.75
CBX1-201ENST00000225603 AKT3Q9Y243 479 aa19.74■□□□□ 0.75
CBX1-201ENST00000225603 PTPN22Q9Y2R2 807 aa19.74■□□□□ 0.75
CBX1-201ENST00000225603 MBLAC1A4D2B0 266 aaPredicted RBP19.73■□□□□ 0.75
CBX1-201ENST00000225603 TTLL13PA6NNM8 815 aa19.73■□□□□ 0.75
CBX1-201ENST00000225603 H0YCG3 227 aa19.73■□□□□ 0.75
CBX1-201ENST00000225603 RBAK-RBAKDNI3L0D1 243 aa19.73■□□□□ 0.75
CBX1-201ENST00000225603 K7ERI5 159 aa19.73■□□□□ 0.75
CBX1-201ENST00000225603 ASGR1P07306 291 aa19.73■□□□□ 0.75
CBX1-201ENST00000225603 TBX2Q13207 712 aaPredicted RBP19.73■□□□□ 0.75
CBX1-201ENST00000225603 CCDC40Q4G0X9 1142 aa19.73■□□□□ 0.75
CBX1-201ENST00000225603 RUFY4Q6ZNE9 571 aa19.73■□□□□ 0.75
CBX1-201ENST00000225603 GOLGA5Q8TBA6 731 aa19.73■□□□□ 0.75
CBX1-201ENST00000225603 HMX1Q9NP08 348 aaPredicted RBP19.73■□□□□ 0.75
CBX1-201ENST00000225603 EXOC7Q9UPT5 735 aa19.73■□□□□ 0.75
CBX1-201ENST00000225603 BRCA2P51587 3418 aa19.73■□□□□ 0.75
CBX1-201ENST00000225603 TREHO43280 583 aa19.72■□□□□ 0.75
CBX1-201ENST00000225603 PPP1R13BQ96KQ4 1090 aa19.72■□□□□ 0.75
CBX1-201ENST00000225603 CCDC113Q9H0I3 377 aa19.72■□□□□ 0.75
CBX1-201ENST00000225603 TMEM134Q9H6X4 195 aa19.72■□□□□ 0.75
CBX1-201ENST00000225603 MINDY3Q9H8M7 445 aa19.72■□□□□ 0.75
CBX1-201ENST00000225603 CTIFO43310 598 aaKnown RBP19.72■□□□□ 0.75
CBX1-201ENST00000225603 ZEB2O60315 1214 aa19.72■□□□□ 0.75
CBX1-201ENST00000225603 CST5P28325 142 aaPredicted RBP19.72■□□□□ 0.75
CBX1-201ENST00000225603 NBPF20Q3BBV1 942 aa19.72■□□□□ 0.75
CBX1-201ENST00000225603 SLC9A9Q8IVB4 645 aa19.72■□□□□ 0.75
CBX1-201ENST00000225603 ZNF592Q92610 1267 aa19.72■□□□□ 0.75
CBX1-201ENST00000225603 NOC4LQ9BVI4 516 aaKnown RBP19.72■□□□□ 0.75
CBX1-201ENST00000225603 FAM49AQ9H0Q0 323 aaPredicted RBP19.72■□□□□ 0.75
CBX1-201ENST00000225603 IFT122Q9HBG6 1241 aa19.72■□□□□ 0.75
CBX1-201ENST00000225603 LGALS16A8MUM7 142 aa19.71■□□□□ 0.75
CBX1-201ENST00000225603 HNRNPDLO14979 420 aaKnown RBP19.71■□□□□ 0.75
CBX1-201ENST00000225603 ASAP2O43150 1006 aa19.71■□□□□ 0.75
CBX1-201ENST00000225603 CSDE1O75534 798 aaKnown RBP19.71■□□□□ 0.75
CBX1-201ENST00000225603 GNA14O95837 355 aa19.71■□□□□ 0.75
CBX1-201ENST00000225603 TMOD1P28289 359 aa19.71■□□□□ 0.75
CBX1-201ENST00000225603 MARSP56192 900 aaKnown RBP19.71■□□□□ 0.75
CBX1-201ENST00000225603 FILIP1LQ4L180 1135 aa19.71■□□□□ 0.75
CBX1-201ENST00000225603 SPECC1LQ69YQ0 1117 aa19.71■□□□□ 0.75
CBX1-201ENST00000225603 C7orf31Q8N865 590 aa19.71■□□□□ 0.75
CBX1-201ENST00000225603 BORCS6Q96GS4 357 aa19.71■□□□□ 0.75
CBX1-201ENST00000225603 HSPBP1Q9NZL4 362 aa19.71■□□□□ 0.75
CBX1-201ENST00000225603 A0A087WZ62 844 aa19.71■□□□□ 0.75
CBX1-201ENST00000225603 PES1O00541 588 aaKnown RBP19.71■□□□□ 0.75
CBX1-201ENST00000225603 MYCP01106 439 aaPredicted RBP19.71■□□□□ 0.75
CBX1-201ENST00000225603 IQCF3P0C7M6 154 aa19.71■□□□□ 0.75
CBX1-201ENST00000225603 HOXC8P31273 242 aa19.71■□□□□ 0.75
CBX1-201ENST00000225603 PBX1P40424 430 aa19.71■□□□□ 0.75
CBX1-201ENST00000225603 PTENP60484 403 aa19.71■□□□□ 0.75
CBX1-201ENST00000225603 STRN3Q13033 797 aa19.71■□□□□ 0.75
CBX1-201ENST00000225603 TFDP1Q14186 410 aa19.71■□□□□ 0.75
CBX1-201ENST00000225603 TRIM59Q8IWR1 403 aa19.71■□□□□ 0.75
CBX1-201ENST00000225603 C12orf56Q8IXR9 622 aa19.71■□□□□ 0.75
CBX1-201ENST00000225603 BICD1Q96G01 975 aa19.71■□□□□ 0.75
CBX1-201ENST00000225603 MAP7D2Q96T17 732 aa19.71■□□□□ 0.75
CBX1-201ENST00000225603 FDXACB1Q9BRP7 624 aaPredicted RBP19.71■□□□□ 0.75
CBX1-201ENST00000225603 TARS2Q9BW92 718 aaKnown RBP19.71■□□□□ 0.75
CBX1-201ENST00000225603 SCN10AQ9Y5Y9 1956 aa19.71■□□□□ 0.75
CBX1-201ENST00000225603 GRIN2DO15399 1336 aa19.7■□□□□ 0.74
CBX1-201ENST00000225603 PHLPP2Q6ZVD8 1323 aa19.7■□□□□ 0.74
CBX1-201ENST00000225603 C17orf102A2RUQ5 167 aa19.7■□□□□ 0.74
CBX1-201ENST00000225603 KIF2AO00139 706 aaPredicted RBP19.7■□□□□ 0.74
CBX1-201ENST00000225603 EXOC3O60645 756 aa19.7■□□□□ 0.74
CBX1-201ENST00000225603 MSCO60682 206 aa19.7■□□□□ 0.74
CBX1-201ENST00000225603 CYP2C9P11712 490 aa19.7■□□□□ 0.74
CBX1-201ENST00000225603 UBXN1Q04323 297 aa19.7■□□□□ 0.74
CBX1-201ENST00000225603 GOLGA8FQ08AF8 430 aa19.7■□□□□ 0.74
CBX1-201ENST00000225603 GOLGA8DPQ0D2H9 430 aa19.7■□□□□ 0.74
CBX1-201ENST00000225603 TMEM62Q0P6H9 643 aa19.7■□□□□ 0.74
CBX1-201ENST00000225603 VWA3BQ502W6 1294 aa19.7■□□□□ 0.74
CBX1-201ENST00000225603 RDH13Q8NBN7 331 aa19.7■□□□□ 0.74
CBX1-201ENST00000225603 ZBTB45Q96K62 511 aaPredicted RBP19.7■□□□□ 0.74
CBX1-201ENST00000225603 PDCL3Q9H2J4 239 aa19.7■□□□□ 0.74
CBX1-201ENST00000225603 CGNQ9P2M7 1197 aaKnown RBP19.7■□□□□ 0.74
CBX1-201ENST00000225603 TRIP12Q14669 1992 aaPredicted RBP19.7■□□□□ 0.74
CBX1-201ENST00000225603 GOLGA8IPA6NC78 632 aa19.7■□□□□ 0.74
CBX1-201ENST00000225603 GOLGA8JA6NMD2 632 aa19.7■□□□□ 0.74
CBX1-201ENST00000225603 SLC16A3O15427 465 aaKnown RBP19.7■□□□□ 0.74
CBX1-201ENST00000225603 EFNA5P52803 228 aa19.7■□□□□ 0.74
CBX1-201ENST00000225603 SNRPFP62306 86 aaKnown RBP19.7■□□□□ 0.74
CBX1-201ENST00000225603 MBTD1Q05BQ5 628 aa19.7■□□□□ 0.74
CBX1-201ENST00000225603 MAN2A1Q16706 1144 aa19.7■□□□□ 0.74
CBX1-201ENST00000225603 FRMD5Q7Z6J6 570 aa19.7■□□□□ 0.74
CBX1-201ENST00000225603 ZBTB8OSQ8IWT0 167 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms