RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 GIPC2Q8TF65 315 aa20.18■□□□□ 0.82
SMPD3-201ENST00000219334 SEPT1Q8WYJ6 367 aa20.18■□□□□ 0.82
SMPD3-201ENST00000219334 ULK4Q96C45 1275 aa20.18■□□□□ 0.82
SMPD3-201ENST00000219334 KIAA0391O15091 583 aaKnown RBP20.18■□□□□ 0.82
SMPD3-201ENST00000219334 TADA2AO75478 443 aa20.18■□□□□ 0.82
SMPD3-201ENST00000219334 TRIM68Q6AZZ1 485 aa20.18■□□□□ 0.82
SMPD3-201ENST00000219334 TUBB6Q9BUF5 446 aa20.18■□□□□ 0.82
SMPD3-201ENST00000219334 MTMR4Q9NYA4 1195 aa20.18■□□□□ 0.82
SMPD3-201ENST00000219334 E5RI56 91 aa20.17■□□□□ 0.82
SMPD3-201ENST00000219334 H3BRJ5 948 aa20.17■□□□□ 0.82
SMPD3-201ENST00000219334 EYA4O95677 639 aa20.17■□□□□ 0.82
SMPD3-201ENST00000219334 CTSHP09668 335 aa20.17■□□□□ 0.82
SMPD3-201ENST00000219334 CETPP11597 493 aa20.17■□□□□ 0.82
SMPD3-201ENST00000219334 FAM102AQ5T9C2 384 aaPredicted RBP20.17■□□□□ 0.82
SMPD3-201ENST00000219334 HHIPL2Q6UWX4 724 aa20.17■□□□□ 0.82
SMPD3-201ENST00000219334 PLA2G12BQ9BX93 195 aa20.17■□□□□ 0.82
SMPD3-201ENST00000219334 TIPINQ9BVW5 301 aa20.17■□□□□ 0.82
SMPD3-201ENST00000219334 SUDS3Q9H7L9 328 aaPredicted RBP20.17■□□□□ 0.82
SMPD3-201ENST00000219334 STXBP3O00186 592 aa20.17■□□□□ 0.82
SMPD3-201ENST00000219334 TMCC1O94876 653 aa20.17■□□□□ 0.82
SMPD3-201ENST00000219334 SZRD1Q7Z422 152 aa20.17■□□□□ 0.82
SMPD3-201ENST00000219334 ZNF212Q9UDV6 495 aa20.17■□□□□ 0.82
SMPD3-201ENST00000219334 PREX2Q70Z35 1606 aa20.17■□□□□ 0.82
SMPD3-201ENST00000219334 CCL15-CCL14A0A0B4J2E2 113 aa20.17■□□□□ 0.82
SMPD3-201ENST00000219334 DGAT1O75907 488 aa20.17■□□□□ 0.82
SMPD3-201ENST00000219334 ACSL3O95573 720 aa20.17■□□□□ 0.82
SMPD3-201ENST00000219334 SLC25A27O95847 323 aa20.17■□□□□ 0.82
SMPD3-201ENST00000219334 CASP1P29466 404 aa20.17■□□□□ 0.82
SMPD3-201ENST00000219334 BCAR1P56945 870 aa20.17■□□□□ 0.82
SMPD3-201ENST00000219334 DRAP1Q14919 205 aaPredicted RBP20.17■□□□□ 0.82
SMPD3-201ENST00000219334 CCL15Q16663 113 aa20.17■□□□□ 0.82
SMPD3-201ENST00000219334 C6orf118Q5T5N4 469 aa20.17■□□□□ 0.82
SMPD3-201ENST00000219334 SMIM5Q71RC9 77 aa20.17■□□□□ 0.82
SMPD3-201ENST00000219334 ZNF564Q8TBZ8 553 aaPredicted RBP20.17■□□□□ 0.82
SMPD3-201ENST00000219334 FAM151AQ8WW52 585 aa20.17■□□□□ 0.82
SMPD3-201ENST00000219334 SH3KBP1Q96B97 665 aa20.17■□□□□ 0.82
SMPD3-201ENST00000219334 SARS2Q9NP81 518 aaKnown RBP20.17■□□□□ 0.82
SMPD3-201ENST00000219334 MYBL1P10243 752 aa20.16■□□□□ 0.82
SMPD3-201ENST00000219334 GRIK1P39086 918 aa20.16■□□□□ 0.82
SMPD3-201ENST00000219334 NYAP2Q9P242 653 aa20.16■□□□□ 0.82
SMPD3-201ENST00000219334 LRRC53A6NM62 1247 aa20.16■□□□□ 0.82
SMPD3-201ENST00000219334 SPECC1L-ADORA2AF8WAN1 911 aa20.16■□□□□ 0.82
SMPD3-201ENST00000219334 ALDH1A1P00352 501 aa20.16■□□□□ 0.82
SMPD3-201ENST00000219334 PTK2BQ14289 1009 aa20.16■□□□□ 0.82
SMPD3-201ENST00000219334 SGMS1Q86VZ5 419 aa20.16■□□□□ 0.82
SMPD3-201ENST00000219334 STAG2Q8N3U4 1231 aa20.16■□□□□ 0.82
SMPD3-201ENST00000219334 GUF1Q8N442 669 aaKnown RBP20.16■□□□□ 0.82
SMPD3-201ENST00000219334 PDCD7Q8N8D1 485 aaKnown RBP20.16■□□□□ 0.82
SMPD3-201ENST00000219334 RNF25Q96BH1 459 aaPredicted RBP20.16■□□□□ 0.82
SMPD3-201ENST00000219334 DRC3Q9H069 523 aa20.16■□□□□ 0.82
SMPD3-201ENST00000219334 NDUFB10O96000 172 aa20.16■□□□□ 0.82
SMPD3-201ENST00000219334 SMARCA1P28370 1054 aa20.16■□□□□ 0.82
SMPD3-201ENST00000219334 GMPSP49915 693 aaPredicted RBP20.16■□□□□ 0.82
SMPD3-201ENST00000219334 ZNF235Q14590 738 aa20.16■□□□□ 0.82
SMPD3-201ENST00000219334 TTC8Q8TAM2 541 aa20.16■□□□□ 0.82
SMPD3-201ENST00000219334 SLC16A10Q8TF71 515 aa20.16■□□□□ 0.82
SMPD3-201ENST00000219334 TRPV6Q9H1D0 765 aa20.16■□□□□ 0.82
SMPD3-201ENST00000219334 DHX35Q9H5Z1 703 aaKnown RBP20.16■□□□□ 0.82
SMPD3-201ENST00000219334 FLT1P17948 1338 aa20.16■□□□□ 0.82
SMPD3-201ENST00000219334 COPEO14579 308 aa20.16■□□□□ 0.82
SMPD3-201ENST00000219334 MAGEB2O15479 319 aa20.16■□□□□ 0.82
SMPD3-201ENST00000219334 PALMO75781 387 aa20.16■□□□□ 0.82
SMPD3-201ENST00000219334 ADCY2Q08462 1091 aa20.16■□□□□ 0.82
SMPD3-201ENST00000219334 SH3TC2Q8TF17 1288 aa20.16■□□□□ 0.82
SMPD3-201ENST00000219334 NUP85Q9BW27 656 aa20.16■□□□□ 0.82
SMPD3-201ENST00000219334 LSM7Q9UK45 103 aaKnown RBP20.16■□□□□ 0.82
SMPD3-201ENST00000219334 SREBF2Q12772 1141 aa20.16■□□□□ 0.82
SMPD3-201ENST00000219334 KIF19Q2TAC6 998 aa20.16■□□□□ 0.82
SMPD3-201ENST00000219334 LRRC43Q8N309 656 aa20.16■□□□□ 0.82
SMPD3-201ENST00000219334 KDM6AO15550 1401 aaPredicted RBP20.16■□□□□ 0.82
SMPD3-201ENST00000219334 RPS12P25398 132 aaKnown RBP20.15■□□□□ 0.82
SMPD3-201ENST00000219334 ZNF543Q08ER8 600 aa20.15■□□□□ 0.82
SMPD3-201ENST00000219334 SPATA31A1Q5TZJ5 1347 aa20.15■□□□□ 0.82
SMPD3-201ENST00000219334 ATP8B1O43520 1251 aa20.15■□□□□ 0.82
SMPD3-201ENST00000219334 RARBP10826 455 aa20.15■□□□□ 0.82
SMPD3-201ENST00000219334 PRAMEP78395 509 aa20.15■□□□□ 0.82
SMPD3-201ENST00000219334 KRT82Q9NSB4 513 aa20.15■□□□□ 0.82
SMPD3-201ENST00000219334 BFARQ9NZS9 450 aa20.15■□□□□ 0.82
SMPD3-201ENST00000219334 NOVA2Q9UNW9 492 aaKnown RBP20.15■□□□□ 0.82
SMPD3-201ENST00000219334 CFLARO15519 480 aa20.15■□□□□ 0.82
SMPD3-201ENST00000219334 PSMD14O00487 310 aa20.15■□□□□ 0.82
SMPD3-201ENST00000219334 STYK1Q6J9G0 422 aa20.15■□□□□ 0.82
SMPD3-201ENST00000219334 MX2P20592 715 aa20.14■□□□□ 0.82
SMPD3-201ENST00000219334 AP1B1Q10567 949 aa20.14■□□□□ 0.82
SMPD3-201ENST00000219334 CDC42EP5Q6NZY7 148 aa20.14■□□□□ 0.82
SMPD3-201ENST00000219334 CDKL3Q8IVW4 592 aaPredicted RBP20.14■□□□□ 0.82
SMPD3-201ENST00000219334 EFHBQ8N7U6 833 aa20.14■□□□□ 0.82
SMPD3-201ENST00000219334 SERPINI1Q99574 410 aa20.14■□□□□ 0.82
SMPD3-201ENST00000219334 UPP2O95045 317 aa20.14■□□□□ 0.81
SMPD3-201ENST00000219334 NR3C2P08235 984 aa20.14■□□□□ 0.81
SMPD3-201ENST00000219334 CRLF3Q8IUI8 442 aa20.14■□□□□ 0.81
SMPD3-201ENST00000219334 GPRC5AQ8NFJ5 357 aa20.14■□□□□ 0.81
SMPD3-201ENST00000219334 TRIM54Q9BYV2 358 aa20.14■□□□□ 0.81
SMPD3-201ENST00000219334 KPNA7A9QM74 516 aa20.14■□□□□ 0.81
SMPD3-201ENST00000219334 PI4K2BG5E9Z4 385 aa20.14■□□□□ 0.81
SMPD3-201ENST00000219334 IMPG1Q17R60 797 aa20.14■□□□□ 0.81
SMPD3-201ENST00000219334 SLC7A5P2Q9GIP4 190 aa20.14■□□□□ 0.81
SMPD3-201ENST00000219334 DDX56Q9NY93 547 aaKnown RBP20.14■□□□□ 0.81
SMPD3-201ENST00000219334 EMSYQ7Z589 1322 aa20.14■□□□□ 0.81
SMPD3-201ENST00000219334 CELF2O95319 508 aaKnown RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms