RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 MCAMP43121 646 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 DPYDQ12882 1025 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 NR5A1Q13285 461 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 NSMFQ6X4W1 530 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 LRRC47Q8N1G4 583 aaKnown RBP4.69□□□□□ -1.66
CHD9-201ENST00000219084 SIX6OS1Q8N1H7 587 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 LCORLQ8N3X6 602 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 DNAAF3Q8N9W5 541 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 KCNB2Q92953 911 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 SERPINB12Q96P63 405 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 GEMIN8Q9NWZ8 242 aaKnown RBP4.69□□□□□ -1.66
CHD9-201ENST00000219084 SMARCAL1Q9NZC9 954 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 PSMC3IPQ9P2W1 217 aaPredicted RBP4.69□□□□□ -1.66
CHD9-201ENST00000219084 SATB2Q9UPW6 733 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 L3MBTL1Q9Y468 752 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 POTEB3A0JP26 581 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 FAM47DPA6NHR8 397 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 E9PMD0 336 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 PSTPIP1O43586 416 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 TOMM70O94826 608 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 OSBPP22059 807 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 GYG1P46976 350 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 EFNA5P52803 228 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 ARHGEF6Q15052 776 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 FIGNQ5HY92 759 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 SCYL2Q6P3W7 929 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 CCDC137Q6PK04 289 aaKnown RBP4.69□□□□□ -1.66
CHD9-201ENST00000219084 POTEBQ6S5H4 581 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 MTHFD1LQ6UB35 978 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 DAGLBQ8NCG7 672 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 OR9Q1Q8NGQ5 310 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 GINM1Q9NU53 330 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 MEIS1O00470 390 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 PYGLP06737 847 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 PMLP29590 882 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 CCZ1BP86790 482 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 CCZ1P86791 482 aaPredicted RBP4.69□□□□□ -1.66
CHD9-201ENST00000219084 ROR1Q01973 937 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 NAB2Q15742 525 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 SUPT20HL1Q3ZLR7 823 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 RC3H1Q5TC82 1133 aaKnown RBP4.69□□□□□ -1.66
CHD9-201ENST00000219084 XAB2Q9HCS7 855 aaKnown RBP4.69□□□□□ -1.66
CHD9-201ENST00000219084 ANAPC7Q9UJX3 599 aa4.69□□□□□ -1.66
CHD9-201ENST00000219084 A0A0A6YYK5 440 aaPredicted RBP4.68□□□□□ -1.66
CHD9-201ENST00000219084 MTSS1O43312 755 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 PPIP5K2O43314 1243 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 LRRN2O75325 713 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 IL10P22301 178 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 CDK8P49336 464 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 KCNQ4P56696 695 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 SP4Q02446 784 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 GRAPQ13588 217 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 RASGRF1Q13972 1273 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 HIC1Q14526 733 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 CYP4F22Q6NT55 531 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 SPATA21Q7Z572 469 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 GRAPLQ8TC17 118 aaPredicted RBP4.68□□□□□ -1.66
CHD9-201ENST00000219084 ERGIC2Q96RQ1 377 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 ISCUQ9H1K1 167 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 ADAM22Q9P0K1 906 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 CCDC78A2IDD5 438 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 ASNSP08243 561 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 GNAT1P11488 350 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 GTF2H1P32780 548 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 PHKA2P46019 1235 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 SMYD4Q8IYR2 804 aaPredicted RBP4.68□□□□□ -1.66
CHD9-201ENST00000219084 CCDC127Q96BQ5 260 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 FAF2Q96CS3 445 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 ASPSCR1Q9BZE9 553 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 SAYSD1Q9NPB0 183 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 TOPORSQ9NS56 1045 aaPredicted RBP4.68□□□□□ -1.66
CHD9-201ENST00000219084 WHRNQ9P202 907 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 HERC5Q9UII4 1024 aaKnown RBP4.68□□□□□ -1.66
CHD9-201ENST00000219084 GGA2Q9UJY4 613 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 SNX5Q9Y5X3 404 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 COL15A1P39059 1388 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 ADGRA3Q8IWK6 1321 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 SETD1AO15047 1707 aaKnown RBP4.68□□□□□ -1.66
CHD9-201ENST00000219084 ZBTB24O43167 697 aaPredicted RBP4.68□□□□□ -1.66
CHD9-201ENST00000219084 ATP1A3P13637 1013 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 CXCR5P32302 372 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 PCYT1AP49585 367 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 CNGA3Q16281 694 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 BSPRYQ5W0U4 402 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 SPOPLQ6IQ16 392 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 GDAP1Q8TB36 358 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 POP5Q969H6 163 aaKnown RBP4.68□□□□□ -1.66
CHD9-201ENST00000219084 FAR2Q96K12 515 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 CEP19Q96LK0 163 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 KCNK16Q96T55 309 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 MSTO1Q9BUK6 570 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 GPBP1L1Q9HC44 474 aaPredicted RBP4.68□□□□□ -1.66
CHD9-201ENST00000219084 TLR7Q9NYK1 1049 aaKnown RBP4.68□□□□□ -1.66
CHD9-201ENST00000219084 DNAJC12Q9UKB3 198 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 CPSF3Q9UKF6 684 aaKnown RBP4.68□□□□□ -1.66
CHD9-201ENST00000219084 STAP1Q9ULZ2 295 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 SLC8A2Q9UPR5 921 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 CDY2AQ9Y6F7 541 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 CDY1Q9Y6F8 540 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 MROH7-TTC4A0A0A0MT08 1334 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms