RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 TFDP2Q14188 446 aa20.08■□□□□ 0.8
MBD3-201ENST00000156825 SAMD7Q7Z3H4 446 aa20.08■□□□□ 0.8
MBD3-201ENST00000156825 THEM5Q8N1Q8 247 aa20.08■□□□□ 0.8
MBD3-201ENST00000156825 CTDNEP1O95476 244 aa20.08■□□□□ 0.8
MBD3-201ENST00000156825 MMEP08473 750 aa20.08■□□□□ 0.8
MBD3-201ENST00000156825 TRIM42Q8IWZ5 723 aa20.08■□□□□ 0.8
MBD3-201ENST00000156825 EFCAB13Q8IY85 973 aa20.08■□□□□ 0.8
MBD3-201ENST00000156825 PPM1NQ8N819 430 aa20.08■□□□□ 0.8
MBD3-201ENST00000156825 PSMD14O00487 310 aa20.07■□□□□ 0.8
MBD3-201ENST00000156825 MX2P20592 715 aa20.07■□□□□ 0.8
MBD3-201ENST00000156825 MAGOHP61326 146 aaKnown RBP20.07■□□□□ 0.8
MBD3-201ENST00000156825 VPS11Q9H270 941 aa20.07■□□□□ 0.8
MBD3-201ENST00000156825 TRIM10Q9UDY6 481 aa20.07■□□□□ 0.8
MBD3-201ENST00000156825 AMACRQ9UHK6 382 aa20.07■□□□□ 0.8
MBD3-201ENST00000156825 TSR3Q9UJK0 312 aaKnown RBP20.07■□□□□ 0.8
MBD3-201ENST00000156825 USP42Q9H9J4 1324 aaKnown RBP20.07■□□□□ 0.8
MBD3-201ENST00000156825 IQANK1A0A1B0GTG1 560 aa20.07■□□□□ 0.8
MBD3-201ENST00000156825 EIF3BP55884 814 aaKnown RBP20.07■□□□□ 0.8
MBD3-201ENST00000156825 PDXDC1Q6P996 788 aa20.07■□□□□ 0.8
MBD3-201ENST00000156825 C1orf228Q6PIY5 440 aa20.07■□□□□ 0.8
MBD3-201ENST00000156825 GANCQ8TET4 914 aa20.07■□□□□ 0.8
MBD3-201ENST00000156825 AFG1LQ8WV93 481 aa20.07■□□□□ 0.8
MBD3-201ENST00000156825 VCX3AQ9NNX9 186 aa20.07■□□□□ 0.8
MBD3-201ENST00000156825 NVLO15381 856 aaKnown RBP20.07■□□□□ 0.8
MBD3-201ENST00000156825 CTSHP09668 335 aa20.07■□□□□ 0.8
MBD3-201ENST00000156825 FXR1P51114 621 aaKnown RBP eCLIP20.07■□□□□ 0.8
MBD3-201ENST00000156825 ADCY2Q08462 1091 aa20.07■□□□□ 0.8
MBD3-201ENST00000156825 TTC30BQ8N4P2 665 aa20.07■□□□□ 0.8
MBD3-201ENST00000156825 CCSER1Q9C0I3 900 aa20.07■□□□□ 0.8
MBD3-201ENST00000156825 MYBP10242 640 aa20.07■□□□□ 0.8
MBD3-201ENST00000156825 KITP10721 976 aa20.07■□□□□ 0.8
MBD3-201ENST00000156825 DUOXA2Q1HG44 320 aa20.07■□□□□ 0.8
MBD3-201ENST00000156825 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.07■□□□□ 0.8
MBD3-201ENST00000156825 PITPNM3Q9BZ71 974 aa20.07■□□□□ 0.8
MBD3-201ENST00000156825 CNOT10Q9H9A5 744 aaKnown RBP20.07■□□□□ 0.8
MBD3-201ENST00000156825 ADAM21Q9UKJ8 722 aa20.07■□□□□ 0.8
MBD3-201ENST00000156825 CPS1P31327 1500 aa20.07■□□□□ 0.8
MBD3-201ENST00000156825 MADDQ8WXG6 1647 aa20.07■□□□□ 0.8
MBD3-201ENST00000156825 PEX19P40855 299 aa20.07■□□□□ 0.8
MBD3-201ENST00000156825 OCRLQ01968 901 aa20.07■□□□□ 0.8
MBD3-201ENST00000156825 TBC1D1Q86TI0 1168 aaPredicted RBP20.07■□□□□ 0.8
MBD3-201ENST00000156825 ANO9A1A5B4 782 aa20.06■□□□□ 0.8
MBD3-201ENST00000156825 VPS72Q15906 364 aa20.06■□□□□ 0.8
MBD3-201ENST00000156825 SBK1Q52WX2 424 aa20.06■□□□□ 0.8
MBD3-201ENST00000156825 EXOC4Q96A65 974 aa20.06■□□□□ 0.8
MBD3-201ENST00000156825 TEX13BQ9BXU2 312 aa20.06■□□□□ 0.8
MBD3-201ENST00000156825 GGA3Q9NZ52 723 aa20.06■□□□□ 0.8
MBD3-201ENST00000156825 NOC2LQ9Y3T9 749 aaKnown RBP20.06■□□□□ 0.8
MBD3-201ENST00000156825 COPEO14579 308 aa20.06■□□□□ 0.8
MBD3-201ENST00000156825 TTC4O95801 387 aa20.06■□□□□ 0.8
MBD3-201ENST00000156825 PDIA5Q14554 519 aa20.06■□□□□ 0.8
MBD3-201ENST00000156825 SDCCAG3Q96C92 435 aa20.06■□□□□ 0.8
MBD3-201ENST00000156825 MS4A14Q96JA4 679 aa20.06■□□□□ 0.8
MBD3-201ENST00000156825 FSD1LQ9BXM9 530 aa20.06■□□□□ 0.8
MBD3-201ENST00000156825 STXBP3O00186 592 aa20.06■□□□□ 0.8
MBD3-201ENST00000156825 KRT37O76014 449 aa20.06■□□□□ 0.8
MBD3-201ENST00000156825 LRRC14Q15048 493 aa20.06■□□□□ 0.8
MBD3-201ENST00000156825 AGBL1Q96MI9 1066 aa20.06■□□□□ 0.8
MBD3-201ENST00000156825 C2orf40Q9H1Z8 148 aa20.06■□□□□ 0.8
MBD3-201ENST00000156825 NR3C2P08235 984 aa20.06■□□□□ 0.8
MBD3-201ENST00000156825 RARBP10826 455 aa20.06■□□□□ 0.8
MBD3-201ENST00000156825 TSPY1Q01534 308 aa20.06■□□□□ 0.8
MBD3-201ENST00000156825 KDELC2Q7Z4H8 507 aa20.06■□□□□ 0.8
MBD3-201ENST00000156825 FBXO33Q7Z6M2 555 aa20.06■□□□□ 0.8
MBD3-201ENST00000156825 SPON2Q9BUD6 331 aa20.06■□□□□ 0.8
MBD3-201ENST00000156825 GCOM2Q9BZD3 368 aaPredicted RBP20.06■□□□□ 0.8
MBD3-201ENST00000156825 HMGB1P1B2RPK0 211 aaPredicted RBP20.05■□□□□ 0.8
MBD3-201ENST00000156825 ESRRAP11474 423 aaPredicted RBP20.05■□□□□ 0.8
MBD3-201ENST00000156825 LCP1P13796 627 aa20.05■□□□□ 0.8
MBD3-201ENST00000156825 TBXAS1P24557 533 aaPredicted RBP20.05■□□□□ 0.8
MBD3-201ENST00000156825 COPB2P35606 906 aa20.05■□□□□ 0.8
MBD3-201ENST00000156825 BCAR1P56945 870 aa20.05■□□□□ 0.8
MBD3-201ENST00000156825 ORC2Q13416 577 aaPredicted RBP20.05■□□□□ 0.8
MBD3-201ENST00000156825 SLC10A5Q5PT55 438 aa20.05■□□□□ 0.8
MBD3-201ENST00000156825 ADSSL1Q8N142 457 aa20.05■□□□□ 0.8
MBD3-201ENST00000156825 FBXO28Q9NVF7 368 aa20.05■□□□□ 0.8
MBD3-201ENST00000156825 HSPBP1Q9NZL4 362 aa20.05■□□□□ 0.8
MBD3-201ENST00000156825 LMCD1Q9NZU5 365 aa20.05■□□□□ 0.8
MBD3-201ENST00000156825 ADGRB3O60242 1522 aa20.05■□□□□ 0.8
MBD3-201ENST00000156825 ARHGEF40Q8TER5 1519 aa20.05■□□□□ 0.8
MBD3-201ENST00000156825 COG7P83436 770 aa20.05■□□□□ 0.8
MBD3-201ENST00000156825 NSUN2Q08J23 767 aaKnown RBP eCLIP20.05■□□□□ 0.8
MBD3-201ENST00000156825 PIN4Q9Y237 131 aaKnown RBP20.05■□□□□ 0.8
MBD3-201ENST00000156825 CCDC195A0A1B0GUA6 201 aa20.05■□□□□ 0.8
MBD3-201ENST00000156825 ZBBXA8MT70 800 aa20.05■□□□□ 0.8
MBD3-201ENST00000156825 DYNC1LI2O43237 492 aaPredicted RBP20.05■□□□□ 0.8
MBD3-201ENST00000156825 DPYDQ12882 1025 aa20.05■□□□□ 0.8
MBD3-201ENST00000156825 KCNB1Q14721 858 aa20.05■□□□□ 0.8
MBD3-201ENST00000156825 CCDC137Q6PK04 289 aaKnown RBP20.05■□□□□ 0.8
MBD3-201ENST00000156825 BZW1Q7L1Q6 419 aaKnown RBP20.05■□□□□ 0.8
MBD3-201ENST00000156825 TTC1Q99614 292 aa20.05■□□□□ 0.8
MBD3-201ENST00000156825 JMJD4Q9H9V9 463 aa20.05■□□□□ 0.8
MBD3-201ENST00000156825 CAPN11Q9UMQ6 739 aa20.05■□□□□ 0.8
MBD3-201ENST00000156825 SUGT1Q9Y2Z0 365 aa20.05■□□□□ 0.8
MBD3-201ENST00000156825 GNGT2O14610 69 aa20.05■□□□□ 0.8
MBD3-201ENST00000156825 PRKCBP05771 671 aa20.05■□□□□ 0.8
MBD3-201ENST00000156825 AP1B1Q10567 949 aa20.05■□□□□ 0.8
MBD3-201ENST00000156825 C16orf86Q6ZW13 317 aa20.05■□□□□ 0.8
MBD3-201ENST00000156825 CPA5Q8WXQ8 436 aa20.05■□□□□ 0.8
MBD3-201ENST00000156825 STRIP2Q9ULQ0 834 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms