RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 GLIS3Q8NEA6 775 aa13.27□□□□□ -0.29
SYPL1-201ENST00000011473 ERCC4Q92889 916 aaPredicted RBP13.27□□□□□ -0.29
SYPL1-201ENST00000011473 PYM1Q9BRP8 204 aaKnown RBP13.27□□□□□ -0.29
SYPL1-201ENST00000011473 NTPCRQ9BSD7 190 aaKnown RBP13.27□□□□□ -0.29
SYPL1-201ENST00000011473 EIF2AQ9BY44 585 aaKnown RBP13.27□□□□□ -0.29
SYPL1-201ENST00000011473 RGS18Q9NS28 235 aa13.27□□□□□ -0.29
SYPL1-201ENST00000011473 MEIS3P2A8K0S8 358 aa13.26□□□□□ -0.29
SYPL1-201ENST00000011473 AMHP03971 560 aa13.26□□□□□ -0.29
SYPL1-201ENST00000011473 MAPTP10636 758 aaKnown RBP13.26□□□□□ -0.29
SYPL1-201ENST00000011473 CASP5P51878 434 aa13.26□□□□□ -0.29
SYPL1-201ENST00000011473 NCKAP1LP55160 1127 aa13.26□□□□□ -0.29
SYPL1-201ENST00000011473 AMPD3Q01432 767 aa13.26□□□□□ -0.29
SYPL1-201ENST00000011473 FAM160A1Q05DH4 1040 aa13.26□□□□□ -0.29
SYPL1-201ENST00000011473 COASYQ13057 564 aa13.26□□□□□ -0.29
SYPL1-201ENST00000011473 PRPF4BQ13523 1007 aaKnown RBP13.26□□□□□ -0.29
SYPL1-201ENST00000011473 TMEM132AQ24JP5 1023 aa13.26□□□□□ -0.29
SYPL1-201ENST00000011473 SLC24A5Q71RS6 500 aa13.26□□□□□ -0.29
SYPL1-201ENST00000011473 HAUS6Q7Z4H7 955 aa13.26□□□□□ -0.29
SYPL1-201ENST00000011473 HERC6Q8IVU3 1022 aa13.26□□□□□ -0.29
SYPL1-201ENST00000011473 SPIRE2Q8WWL2 714 aa13.26□□□□□ -0.29
SYPL1-201ENST00000011473 TOP1MTQ969P6 601 aa13.26□□□□□ -0.29
SYPL1-201ENST00000011473 C7orf25Q9BPX7 421 aa13.26□□□□□ -0.29
SYPL1-201ENST00000011473 IKZF4Q9H2S9 585 aa13.26□□□□□ -0.29
SYPL1-201ENST00000011473 MAGEF1Q9HAY2 307 aa13.26□□□□□ -0.29
SYPL1-201ENST00000011473 PRMT7Q9NVM4 692 aaPredicted RBP13.26□□□□□ -0.29
SYPL1-201ENST00000011473 HES2Q9Y543 173 aa13.26□□□□□ -0.29
SYPL1-201ENST00000011473 FRMD3A2A2Y4 597 aa13.25□□□□□ -0.29
SYPL1-201ENST00000011473 C9IYK1 514 aa13.25□□□□□ -0.29
SYPL1-201ENST00000011473 EFCAB14O75071 495 aa13.25□□□□□ -0.29
SYPL1-201ENST00000011473 GATMP50440 423 aa13.25□□□□□ -0.29
SYPL1-201ENST00000011473 EFNA5P52803 228 aa13.25□□□□□ -0.29
SYPL1-201ENST00000011473 UBE2HP62256 183 aa13.25□□□□□ -0.29
SYPL1-201ENST00000011473 CLEC17AQ6ZS10 378 aa13.25□□□□□ -0.29
SYPL1-201ENST00000011473 LPPQ93052 612 aa13.25□□□□□ -0.29
SYPL1-201ENST00000011473 LRCH3Q96II8 777 aa13.25□□□□□ -0.29
SYPL1-201ENST00000011473 SLC9A7Q96T83 725 aa13.25□□□□□ -0.29
SYPL1-201ENST00000011473 ZBED2Q9BTP6 218 aa13.25□□□□□ -0.29
SYPL1-201ENST00000011473 TARS2Q9BW92 718 aaKnown RBP13.25□□□□□ -0.29
SYPL1-201ENST00000011473 PBX4Q9BYU1 374 aa13.25□□□□□ -0.29
SYPL1-201ENST00000011473 MRPL44Q9H9J2 332 aaKnown RBP13.25□□□□□ -0.29
SYPL1-201ENST00000011473 PHLPP2Q6ZVD8 1323 aa13.25□□□□□ -0.29
SYPL1-201ENST00000011473 A0A1W2PPC1 479 aa13.25□□□□□ -0.29
SYPL1-201ENST00000011473 LCHNA4D1U4 455 aa13.25□□□□□ -0.29
SYPL1-201ENST00000011473 ACKR2O00590 384 aa13.25□□□□□ -0.29
SYPL1-201ENST00000011473 GJB5O95377 273 aa13.25□□□□□ -0.29
SYPL1-201ENST00000011473 FGFR1P11362 822 aa13.25□□□□□ -0.29
SYPL1-201ENST00000011473 KCNA1Q09470 495 aa13.25□□□□□ -0.29
SYPL1-201ENST00000011473 HABP4Q5JVS0 413 aaKnown RBP13.25□□□□□ -0.29
SYPL1-201ENST00000011473 UBXN11Q5T124 520 aa13.25□□□□□ -0.29
SYPL1-201ENST00000011473 NT5DC1Q5TFE4 455 aa13.25□□□□□ -0.29
SYPL1-201ENST00000011473 EEF1DP3Q658K8 133 aa13.25□□□□□ -0.29
SYPL1-201ENST00000011473 NOTUMQ6P988 496 aa13.25□□□□□ -0.29
SYPL1-201ENST00000011473 GBP4Q96PP9 640 aa13.25□□□□□ -0.29
SYPL1-201ENST00000011473 FAM105AQ9NUU6 356 aa13.25□□□□□ -0.29
SYPL1-201ENST00000011473 CNTNAP2Q9UHC6 1331 aa13.24□□□□□ -0.29
SYPL1-201ENST00000011473 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.24□□□□□ -0.29
SYPL1-201ENST00000011473 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.24□□□□□ -0.29
SYPL1-201ENST00000011473 TLL1O43897 1013 aa13.24□□□□□ -0.29
SYPL1-201ENST00000011473 GCNT3O95395 438 aa13.24□□□□□ -0.29
SYPL1-201ENST00000011473 MYBP10242 640 aa13.24□□□□□ -0.29
SYPL1-201ENST00000011473 ATF7P17544 494 aaPredicted RBP13.24□□□□□ -0.29
SYPL1-201ENST00000011473 SARSP49591 514 aaKnown RBP13.24□□□□□ -0.29
SYPL1-201ENST00000011473 PNOCQ13519 176 aa13.24□□□□□ -0.29
SYPL1-201ENST00000011473 FAM187BQ17R55 369 aa13.24□□□□□ -0.29
SYPL1-201ENST00000011473 LRIT3Q3SXY7 679 aa13.24□□□□□ -0.29
SYPL1-201ENST00000011473 PPP4R3CPQ6ZMV5 832 aa13.24□□□□□ -0.29
SYPL1-201ENST00000011473 ZNF720Q7Z2F6 126 aa13.24□□□□□ -0.29
SYPL1-201ENST00000011473 SPRED2Q7Z698 418 aa13.24□□□□□ -0.29
SYPL1-201ENST00000011473 CCDC65Q8IXS2 484 aa13.24□□□□□ -0.29
SYPL1-201ENST00000011473 CRIPAKQ8N1N5 446 aa13.24□□□□□ -0.29
SYPL1-201ENST00000011473 PRIMPOLQ96LW4 560 aa13.24□□□□□ -0.29
SYPL1-201ENST00000011473 LRRC27Q9C0I9 530 aa13.24□□□□□ -0.29
SYPL1-201ENST00000011473 PDZD7Q9H5P4 517 aa13.24□□□□□ -0.29
SYPL1-201ENST00000011473 CHST12Q9NRB3 414 aa13.24□□□□□ -0.29
SYPL1-201ENST00000011473 DACT1Q9NYF0 836 aa13.24□□□□□ -0.29
SYPL1-201ENST00000011473 USP25Q9UHP3 1055 aa13.24□□□□□ -0.29
SYPL1-201ENST00000011473 YBX2Q9Y2T7 364 aaKnown RBP13.24□□□□□ -0.29
SYPL1-201ENST00000011473 PCDHB2Q9Y5E7 798 aa13.24□□□□□ -0.29
SYPL1-201ENST00000011473 A0A0U1RQF3 1178 aa13.24□□□□□ -0.29
SYPL1-201ENST00000011473 A0A1B0GUA9 196 aa13.24□□□□□ -0.29
SYPL1-201ENST00000011473 ARHGEF15O94989 841 aa13.24□□□□□ -0.29
SYPL1-201ENST00000011473 NPTXRO95502 500 aa13.24□□□□□ -0.29
SYPL1-201ENST00000011473 NCBP1Q09161 790 aaKnown RBP13.24□□□□□ -0.29
SYPL1-201ENST00000011473 STRN3Q13033 797 aa13.24□□□□□ -0.29
SYPL1-201ENST00000011473 ECHDC2Q86YB7 292 aa13.24□□□□□ -0.29
SYPL1-201ENST00000011473 PHOSPHO2Q8TCD6 241 aa13.24□□□□□ -0.29
SYPL1-201ENST00000011473 ZBTB45Q96K62 511 aaPredicted RBP13.24□□□□□ -0.29
SYPL1-201ENST00000011473 APOL6Q9BWW8 343 aa13.24□□□□□ -0.29
SYPL1-201ENST00000011473 NXF3Q9H4D5 531 aaKnown RBP13.24□□□□□ -0.29
SYPL1-201ENST00000011473 TMEM134Q9H6X4 195 aa13.24□□□□□ -0.29
SYPL1-201ENST00000011473 LMBRD1Q9NUN5 540 aa13.24□□□□□ -0.29
SYPL1-201ENST00000011473 LRFN2Q9ULH4 789 aa13.24□□□□□ -0.29
SYPL1-201ENST00000011473 TBX20Q9UMR3 447 aa13.24□□□□□ -0.29
SYPL1-201ENST00000011473 PCDHB7Q9Y5E2 793 aa13.24□□□□□ -0.29
SYPL1-201ENST00000011473 TISP43B9A030 160 aa13.23□□□□□ -0.29
SYPL1-201ENST00000011473 KLRC4O43908 158 aa13.23□□□□□ -0.29
SYPL1-201ENST00000011473 HARSP12081 509 aaKnown RBP13.23□□□□□ -0.29
SYPL1-201ENST00000011473 GAP43P17677 238 aa13.23□□□□□ -0.29
SYPL1-201ENST00000011473 PCBP1Q15365 356 aaKnown RBP eCLIP13.23□□□□□ -0.295e-10■□□□□ 10.9
SYPL1-201ENST00000011473 PAN2Q504Q3 1202 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms