RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 Rcan1Q9JHG6 198 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Rnf25Q9QZR0 456 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Eif2ak1Q9Z2R9 619 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Zfp292Q9Z2U2 2698 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 MgaA2AWL7 3003 aaKnown RBP9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Vmn2r87E9PZX4 848 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Itm2bO89051 266 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Hoxb8P09632 243 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Fgfr1P16092 822 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Gpr15Q0VDU3 360 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 March5Q3KNM2 278 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Gpatch11Q3UFS4 262 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Znf827Q505G8 1078 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Sema5bQ60519 1093 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Cyp4x1Q6A152 507 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Krt87Q6IMF0 495 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Rad9bQ6WBX7 403 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Olfr1046Q7TR79 316 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Arhgef19Q8BWA8 802 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Nemp2Q8CB65 421 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Zc3h3Q8CHP0 950 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Sbk1Q8QZX0 417 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 RabepkQ8VCH5 380 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Smg8Q8VE18 991 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Dnajc19Q9CQV7 116 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Cd2bp2Q9CWK3 342 aaKnown RBP9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Gtf3c6Q9D8P7 227 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Q9D9S1 216 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Nmnat1Q9EPA7 285 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Gde1Q9JL56 331 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Add3Q9QYB5 706 aaKnown RBP9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Abca4O35600 2310 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Rp1P56716 2095 aa9□□□□□ -0.97
Trim40-203ENSMUST00000172711 Zfp236S4R299 1847 aa8.99□□□□□ -0.97
Trim40-203ENSMUST00000172711 Igkv17-121A0A0G2JFA8 117 aa8.99□□□□□ -0.97
Trim40-203ENSMUST00000172711 Gm45713A0A1B0GS68 446 aa8.99□□□□□ -0.97
Trim40-203ENSMUST00000172711 Map7d2A2AG50 781 aa8.99□□□□□ -0.97
Trim40-203ENSMUST00000172711 Zkscan16A2ALW2 728 aa8.99□□□□□ -0.97
Trim40-203ENSMUST00000172711 Fibcd1A2AV25 459 aa8.99□□□□□ -0.97
Trim40-203ENSMUST00000172711 Ttll6A4Q9E8 822 aa8.99□□□□□ -0.97
Trim40-203ENSMUST00000172711 Farp1F8VPU2 1048 aa8.99□□□□□ -0.97
Trim40-203ENSMUST00000172711 RaxO35602 342 aa8.99□□□□□ -0.97
Trim40-203ENSMUST00000172711 Cd22P35329 862 aa8.99□□□□□ -0.97
Trim40-203ENSMUST00000172711 Dnm2P39054 870 aaKnown RBP8.99□□□□□ -0.97
Trim40-203ENSMUST00000172711 CiitaP79621 1155 aa8.99□□□□□ -0.97
Trim40-203ENSMUST00000172711 Kmt5bQ3U8K7 883 aa8.99□□□□□ -0.97
Trim40-203ENSMUST00000172711 Asap3Q5U464 904 aa8.99□□□□□ -0.97
Trim40-203ENSMUST00000172711 Usp17laQ61068 526 aa8.99□□□□□ -0.97
Trim40-203ENSMUST00000172711 Git1Q68FF6 770 aa8.99□□□□□ -0.97
Trim40-203ENSMUST00000172711 Armcx2Q6A058 784 aaKnown RBP8.99□□□□□ -0.97
Trim40-203ENSMUST00000172711 Nudt16Q6P3D0 195 aa8.99□□□□□ -0.97
Trim40-203ENSMUST00000172711 Asnsd1Q8BFS9 627 aa8.99□□□□□ -0.97
Trim40-203ENSMUST00000172711 Frat2Q8K025 231 aa8.99□□□□□ -0.97
Trim40-203ENSMUST00000172711 Tspan8Q8R3G9 235 aa8.99□□□□□ -0.97
Trim40-203ENSMUST00000172711 Hs2st1Q8R3H7 356 aa8.99□□□□□ -0.97
Trim40-203ENSMUST00000172711 Olfr532Q8VGT4 309 aa8.99□□□□□ -0.97
Trim40-203ENSMUST00000172711 Csde1Q91W50 798 aaKnown RBP8.99□□□□□ -0.97
Trim40-203ENSMUST00000172711 Rpn1Q91YQ5 608 aaKnown RBP8.99□□□□□ -0.97
Trim40-203ENSMUST00000172711 Atp6v0a4Q920R6 833 aa8.99□□□□□ -0.97
Trim40-203ENSMUST00000172711 Emc2Q9CRD2 297 aa8.99□□□□□ -0.97
Trim40-203ENSMUST00000172711 Mfsd10Q9D2V8 456 aaKnown RBP8.99□□□□□ -0.97
Trim40-203ENSMUST00000172711 Krt34Q9D646 392 aa8.99□□□□□ -0.97
Trim40-203ENSMUST00000172711 Pebp4Q9D9G2 242 aa8.99□□□□□ -0.97
Trim40-203ENSMUST00000172711 NapaQ9DB05 295 aa8.99□□□□□ -0.97
Trim40-203ENSMUST00000172711 Syde1Q9DBZ9 737 aa8.99□□□□□ -0.97
Trim40-203ENSMUST00000172711 Rab13Q9DD03 202 aa8.99□□□□□ -0.97
Trim40-203ENSMUST00000172711 Cd274Q9EP73 290 aa8.99□□□□□ -0.97
Trim40-203ENSMUST00000172711 Trhr2Q9ERT2 382 aa8.99□□□□□ -0.97
Trim40-203ENSMUST00000172711 Cacng4Q9JJV4 327 aa8.99□□□□□ -0.97
Trim40-203ENSMUST00000172711 Gm9573F7C950 1606 aa8.99□□□□□ -0.97
Trim40-203ENSMUST00000172711 Klhdc7bA0A286YD60 1263 aa8.98□□□□□ -0.97
Trim40-203ENSMUST00000172711 Cdr2lA2A6T1 465 aa8.98□□□□□ -0.97
Trim40-203ENSMUST00000172711 1700001O22RikA2APZ1 375 aa8.98□□□□□ -0.97
Trim40-203ENSMUST00000172711 Tex13cD3YU32 604 aa8.98□□□□□ -0.97
Trim40-203ENSMUST00000172711 Rsbn1lD3Z0K6 821 aa8.98□□□□□ -0.97
Trim40-203ENSMUST00000172711 Zfp358E9Q8M1 571 aa8.98□□□□□ -0.97
Trim40-203ENSMUST00000172711 Grem1O70326 184 aa8.98□□□□□ -0.97
Trim40-203ENSMUST00000172711 Pcdha4O88689 947 aa8.98□□□□□ -0.97
Trim40-203ENSMUST00000172711 Mettl14Q3UIK4 456 aa8.98□□□□□ -0.97
Trim40-203ENSMUST00000172711 H2-Q2Q4KN81 360 aa8.98□□□□□ -0.97
Trim40-203ENSMUST00000172711 Kif5bQ61768 963 aa8.98□□□□□ -0.97
Trim40-203ENSMUST00000172711 PodnQ7TQ62 611 aa8.98□□□□□ -0.97
Trim40-203ENSMUST00000172711 Reps2Q80XA6 521 aa8.98□□□□□ -0.97
Trim40-203ENSMUST00000172711 Nod1Q8BHB0 953 aa8.98□□□□□ -0.97
Trim40-203ENSMUST00000172711 Robo4Q8C310 1012 aa8.98□□□□□ -0.97
Trim40-203ENSMUST00000172711 Gpr158Q8C419 1200 aa8.98□□□□□ -0.97
Trim40-203ENSMUST00000172711 FgbQ8K0E8 481 aa8.98□□□□□ -0.97
Trim40-203ENSMUST00000172711 Olfr395Q8VGR3 312 aa8.98□□□□□ -0.97
Trim40-203ENSMUST00000172711 YwhabQ9CQV8 246 aaKnown RBP8.98□□□□□ -0.97
Trim40-203ENSMUST00000172711 Smyd3Q9CWR2 428 aa8.98□□□□□ -0.97
Trim40-203ENSMUST00000172711 Ephx1Q9D379 455 aa8.98□□□□□ -0.97
Trim40-203ENSMUST00000172711 Homer2Q9QWW1 354 aa8.98□□□□□ -0.97
Trim40-203ENSMUST00000172711 C1qtnf1Q9QXP7 281 aa8.98□□□□□ -0.97
Trim40-203ENSMUST00000172711 Cacna1gQ5SUF7 2381 aa8.98□□□□□ -0.97
Trim40-203ENSMUST00000172711 Gm5737A0A140LI11 423 aa8.97□□□□□ -0.97
Trim40-203ENSMUST00000172711 Phactr2B1AVP0 632 aa8.97□□□□□ -0.97
Trim40-203ENSMUST00000172711 Gimd1E9PW74 217 aa8.97□□□□□ -0.97
Trim40-203ENSMUST00000172711 Slc39a2G3X943 309 aa8.97□□□□□ -0.97
Trim40-203ENSMUST00000172711 Gm11236J3QMS7 360 aa8.97□□□□□ -0.97
Trim40-203ENSMUST00000172711 Vti1aO89116 217 aa8.97□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 20.1 ms