RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Fam8a1Q3URQ4 399 aa9.44□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Znf827Q505G8 1078 aa9.44□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Adad1Q5SUE7 619 aa9.44□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Akap4Q60662 849 aa9.44□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Ccdc189Q6NZQ0 333 aa9.44□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Kcns3Q8BQZ8 491 aa9.44□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Cog5Q8C0L8 829 aa9.44□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Cep57Q8CEE0 500 aa9.44□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Erich5Q8K0S2 362 aa9.44□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Washc1Q8VDD8 475 aa9.44□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Ccdc92Q8VDN4 314 aa9.44□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Prpf3Q922U1 683 aaKnown RBP9.44□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Slc12a7Q9WVL3 1083 aa9.44□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Gimap9G3X987 291 aa9.44□□□□□ -0.9
Col28a1-201ENSMUST00000115537 OsbpQ3B7Z2 805 aa9.44□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Tmem120bQ3TA38 339 aa9.44□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Ttbk2Q3UVR3 1243 aa9.44□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Nacc1Q7TSZ8 514 aa9.44□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Tor1aip2Q8BYU6 502 aa9.44□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Ccdc28bQ8CEG5 200 aa9.44□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Slc51aQ8R000 340 aa9.44□□□□□ -0.9
Col28a1-201ENSMUST00000115537 IrgqQ8VIM9 583 aa9.44□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Btbd18A0A0A6YY25 723 aa9.43□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Dnaaf5B9EJR8 853 aa9.43□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Casp12O08736 419 aa9.43□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Mucl2P02815 138 aa9.43□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Rag1P15919 1040 aa9.43□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Gjb4Q02738 266 aa9.43□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Birc2Q62210 612 aa9.43□□□□□ -0.9
Col28a1-201ENSMUST00000115537 DolkQ8R2Y3 534 aa9.43□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Mss51Q9D5Z5 446 aa9.43□□□□□ -0.9
Col28a1-201ENSMUST00000115537 ArcQ9WV31 396 aa9.43□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Twf2Q9Z0P5 349 aaKnown RBP9.43□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Krt27Q9Z320 448 aa9.43□□□□□ -0.9
Col28a1-201ENSMUST00000115537 GabreA2AMW3 916 aa9.43□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Pcif1P59114 706 aa9.43□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Uhmk1P97343 419 aa9.43□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Shc3Q61120 474 aa9.43□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Map2k2Q63932 401 aa9.43□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Sec23ipQ6NZC7 998 aa9.43□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Rexo1Q7TT28 1213 aa9.43□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Tarsl2Q8BLY2 790 aa9.43□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Trmt2aQ8BNV1 574 aaKnown RBP9.43□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Mtmr4Q91XS1 1190 aa9.43□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Gbp7Q91Z40 638 aa9.43□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Pidd1Q9ERV7 915 aa9.43□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Hao1Q9WU19 370 aa9.43□□□□□ -0.9
Col28a1-201ENSMUST00000115537 B020011L13RikA0A087WQI7 412 aa9.43□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Naaladl2A0A0N4SUJ3 795 aa9.43□□□□□ -0.9
Col28a1-201ENSMUST00000115537 DohhA0A1Y7VJ29 135 aa9.43□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Fam171a1A2ATK9 892 aa9.43□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Skor2A7M7C7 1008 aa9.43□□□□□ -0.9
Col28a1-201ENSMUST00000115537 A630010A05RikA9C473 232 aa9.43□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Gm3415J3QMS8 315 aa9.43□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Cnga4Q3UW12 575 aa9.43□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Ahcyl2Q68FL4 613 aaKnown RBP9.43□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Klhl23Q6GQU2 558 aa9.43□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Q6PD19 689 aa9.43□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Heatr3Q8BQM4 679 aa9.43□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Atp6v1g1Q9CR51 118 aa9.43□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Mrps22Q9CXW2 359 aa9.43□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Ppil2Q9D787 521 aa9.43□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Atp6v1c1Q9Z1G3 382 aa9.43□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Bcl9lQ67FY2 1494 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Trappc11B2RXC1 1133 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Gm10110D3Z5M2 615 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 PurbO35295 324 aaKnown RBP9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Stat3P42227 770 aaKnown RBP9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Bace1P56818 501 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Cyth2P63034 400 aaKnown RBP9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Ppp4cP97470 307 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Pdp2Q504M2 532 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Lrig2Q52KR2 1054 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Fxr1Q61584 677 aaKnown RBP9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 SpopQ6ZWS8 374 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 FsbpQ8BKE5 299 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Agap1Q8BXK8 857 aaKnown RBP9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Bzw2Q91VK1 419 aaKnown RBP9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Cep72Q9D3R3 646 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 4931423N10RikQ9D4J9 382 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Tlr2Q9QUN7 784 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Ahnak2E9PYB0 1738 aaKnown RBP9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Lrrc74aA0A1Y7VMD6 494 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Gm44503E9PYU5 387 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Atp9aO70228 1047 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Men1O88559 611 aaKnown RBP9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Hps5P59438 1126 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Shox2P70390 331 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Mphosph8Q3TYA6 858 aaKnown RBP9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Q3TYL0 343 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Gm11437Q5QR91 290 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Mettl25Q6NXH8 597 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 HltfQ6PCN7 1003 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Rnf220Q6PDX6 566 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 TdrkhQ80VL1 560 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Fbxo28Q8BIG4 368 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 GlyctkQ8QZY2 523 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Psmd6Q99JI4 389 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Gm43738A0A0G2JEA5 862 aa9.42□□□□□ -0.9
Col28a1-201ENSMUST00000115537 Ccdc144bE9PVZ3 520 aa9.42□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 16.6 ms