RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Gm45837F7D3W5 961 aa12.44□□□□□ -0.42
Col9a1-202ENSMUST00000088349 4930544D05RikJ3QK56 214 aa12.44□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Art2bO35975 289 aa12.44□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Krt19P19001 403 aa12.44□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Mier3Q3UHF3 551 aa12.44□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Nell2Q61220 819 aa12.44□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Rusc1Q8BG26 893 aa12.44□□□□□ -0.42
Col9a1-202ENSMUST00000088349 L3mbtl3Q8BLB7 883 aa12.44□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Pop1Q8K205 1045 aa12.44□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Shtn1Q8K2Q9 631 aa12.44□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Pde2aQ922S4 916 aa12.44□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Cpb2Q9JHH6 422 aa12.44□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Tacc3Q9JJ11 631 aa12.44□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Rasgrp1Q9Z1S3 795 aa12.44□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Net1Q9Z206 595 aa12.44□□□□□ -0.42
Col9a1-202ENSMUST00000088349 UncxO08934 530 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Diaph2O70566 1098 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Pdk4O70571 412 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Map2k1P31938 393 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Shox2P70390 331 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Fgfr4Q03142 799 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Rhox12Q4TU81 186 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Mtus1Q5HZI1 1210 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Gas7Q60780 421 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Naa25Q8BWZ3 972 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Zhx2Q8C0C0 836 aaKnown RBP12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Appl2Q8K3G9 662 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Tmem79Q9D709 391 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Krt17Q9QWL7 433 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Myh14Q6URW6 2000 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Osbpl7A2A716 963 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Cd68P31996 326 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Uhmk1P97343 419 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Rccd1Q8BTU7 377 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Agap1Q8BXK8 857 aaKnown RBP12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Efl1Q8C0D5 1127 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Lin9Q8C735 542 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Apbb1ipQ8R5A3 670 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Usp33Q8R5K2 909 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Slc25a38Q91XD8 326 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Pcdhb3Q91XZ7 784 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Hebp1Q9R257 190 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 SufuQ9Z0P7 484 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Lamb1P02469 1786 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Gm45194A0A140LJG2 572 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Lrrc74aA0A1Y7VMD6 494 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Prdm11A2AGX3 565 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Myo1eE9Q634 1107 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 ArP19091 899 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Hoxa11P31311 313 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Gspt2Q149F3 632 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Ogfod1Q3U0K8 545 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Sorbs1Q62417 1290 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Nlrp14Q6B966 993 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Epc2Q8C0I4 808 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Slc26a6Q8CIW6 758 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Slc18a1Q8R090 521 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Slc26a7Q8R2Z3 656 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Trpm8Q8R4D5 1104 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Ttc5Q99LG4 440 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Cfap53Q9D439 514 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Zfp646Q6NV66 1788 aa12.43□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Nup62clA2AG10 272 aa12.42□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Lrrc38A2VDH3 298 aa12.42□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Ace3D0G895 737 aa12.42□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Heatr4E9Q357 955 aa12.42□□□□□ -0.42
Col9a1-202ENSMUST00000088349 CatspereP0DP43 985 aa12.42□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Msh2P43247 935 aaKnown RBP12.42□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Ppp3caP63328 521 aa12.42□□□□□ -0.42
Col9a1-202ENSMUST00000088349 SpertQ32MG2 446 aa12.42□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Trim80Q3V061 624 aa12.42□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Kiaa1328Q6NZK5 612 aa12.42□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Scfd1Q8BRF7 639 aaKnown RBP12.42□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Mrgprx1Q8CIP3 322 aa12.42□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Reep2Q8VCD6 254 aa12.42□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Zcchc8Q9CYA6 709 aaKnown RBP12.42□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Pabpc6Q9D4E6 643 aaKnown RBP12.42□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Nudt12Q9DCN1 462 aa12.42□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Astn1Q61137 1302 aa12.42□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Eef1dP57776 281 aaKnown RBP12.42□□□□□ -0.42
Col9a1-202ENSMUST00000088349 4930502E18RikQ14BQ3 236 aa12.42□□□□□ -0.42
Col9a1-202ENSMUST00000088349 OgdhQ60597 1023 aaKnown RBP12.42□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Retreg2Q6NS82 541 aa12.42□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Mageb18Q8BQR7 327 aa12.42□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Rapgef5Q8C0Q9 814 aa12.42□□□□□ -0.42
Col9a1-202ENSMUST00000088349 C130026I21RikQ8C898 291 aa12.42□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Syngap1F6SEU4 1340 aa12.42□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Col1a1P11087 1453 aa12.42□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Gm5936A2BG95 728 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Gm5640A3KG49 728 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Cdk14O35495 469 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 NppbP40753 121 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Abi2P62484 446 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Col9a2Q07643 688 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Yipf3Q3UDR8 347 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Klrg2Q3UM83 387 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Wnk4Q80UE6 1222 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Pkn2Q8BWW9 983 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 PaoxQ8C0L6 504 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Tbc1d10cQ8C9V1 444 aa12.41□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 32.7 ms