RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 BrdtQ91Y44 956 aa11.07□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Tor1aip1Q921T2 595 aaKnown RBP11.07□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Adam7O35227 789 aa11.07□□□□□ -0.64
Scn8a-201ENSMUST00000082209 IqcmQ149I8 489 aa11.07□□□□□ -0.64
Scn8a-201ENSMUST00000082209 ChukQ60680 745 aa11.07□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Slc9c1Q6UJY2 1175 aa11.07□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Amhr2Q8K592 568 aa11.07□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Rpn1Q91YQ5 608 aaKnown RBP11.07□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Rassf7Q9DD19 359 aa11.07□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Map3k20Q9ESL4 802 aaKnown RBP11.07□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Myo5bP21271 1818 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Sik3Q6P4S6 1311 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Arhgef26D3YYY8 869 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Exoc7O35250 697 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Hddc2Q3SXD3 199 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 EmsyQ8BMB0 1264 aaKnown RBP11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Fip1l1Q9D824 581 aaKnown RBP11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Pole3Q9JKP7 145 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Dip2cE9PWR4 1557 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Gm4952Q5FW57 296 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Avpr1aQ62463 423 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Clca2Q8BG22 942 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 MlxiplQ99MZ3 864 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Q9CYI0 393 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 SynrgQ5SV85 1306 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Snap23O09044 210 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Cdh15P33146 784 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Srrm3Q80WV7 648 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Phf20Q8BLG0 1010 aaKnown RBP11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Rfc4Q99J62 364 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Itpripl1A2ASA8 547 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 FancfE9Q5Z5 343 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Gm3460E9QAI8 215 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Il1rapl1P59823 695 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Myo1dQ5SYD0 1006 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Rundc3bQ6PDC0 408 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Pum3Q8BKS9 647 aaKnown RBP11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Haus7Q8BKT8 364 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Serpina3bQ8BYY9 420 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Ppp1r14cQ8R4S0 164 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Eif3hQ91WK2 352 aaKnown RBP11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Pdxdc1Q99K01 787 aaKnown RBP11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Rgs22G3UYX5 1258 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Hmgxb3G3X9M3 1254 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 TbckQ8BM85 762 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Nudcd3Q8R1N4 363 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Tut1Q8R3F9 869 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Dnajc3Q91YW3 504 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Pgm1Q9D0F9 562 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 MafgO54790 162 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 AgtP11859 477 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Ap2a2P17427 938 aaKnown RBP11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Fam92bQ3V2J0 292 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Tnip2Q99JG7 430 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Mgea5Q9EQQ9 916 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Ttc17E9PVB5 1198 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Gm3127E9Q9P5 263 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Gm3453K7N724 263 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 GmncQ3URY2 333 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Znf532Q6NXK2 1036 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Ephb1Q8CBF3 984 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Arl8aQ8VEH3 186 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Psmc5P62196 406 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 PRAG1Q571I4 1179 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Vmn1r209Q5NC97 312 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Heatr3Q8BQM4 679 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Q9D937 123 aaKnown RBP11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Ing2Q9ESK4 281 aa11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Gtf2ird1Q9JI57 1104 aaKnown RBP11.06□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Serpina1eQ00898 413 aa11.05□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Tdpoz2Q717B2 364 aa11.05□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Cdk17Q8K0D0 523 aa11.05□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Lrrc41Q8K1C9 807 aa11.05□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Pcgf5Q3UK78 256 aa11.05□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Lyve1Q8BHC0 318 aa11.05□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Ccdc77Q9CZH8 489 aa11.05□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Dusp10Q9ESS0 483 aa11.05□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Pard6bQ9JK83 371 aa11.05□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Rimbp3Q3V0F0 1606 aa11.05□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Gm5795E9PZN8 263 aa11.05□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Klc2O88448 599 aa11.05□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Kdm7aQ3UWM4 940 aa11.05□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Tigd5Q499M4 642 aa11.05□□□□□ -0.64
Scn8a-201ENSMUST00000082209 CtifQ6PEE2 600 aaKnown RBP11.05□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Stkld1Q80YS9 662 aa11.05□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Stk32bQ9JJX8 414 aa11.05□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Morc1Q9WVL5 950 aa11.05□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Tpp1O89023 562 aa11.05□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Yars2Q8BYL4 472 aaKnown RBP11.05□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Wbp11Q923D5 641 aaKnown RBP11.05□□□□□ -0.64
Scn8a-201ENSMUST00000082209 PdhbQ9D051 359 aa11.05□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Rmi1Q9D4G9 616 aa11.05□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Farp1F8VPU2 1048 aa11.05□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Alppl2P24823 529 aa11.05□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Sucla2Q9Z2I9 463 aa11.05□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Atp5bP56480 529 aaKnown RBP11.05□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Qrich1Q3UA37 777 aa11.05□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Gucy2cQ3UWA6 1072 aa11.05□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Ccdc185Q3V118 621 aa11.05□□□□□ -0.64
Scn8a-201ENSMUST00000082209 Gm10392Q3V3I3 114 aa11.05□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 149.5 ms