RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Depdc1aQ8CIG0 804 aa10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Ccdc137Q8R0K4 290 aaKnown RBP10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Sgms1Q8VCQ6 419 aa10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Rexo2Q9D8S4 237 aa10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Edf1Q9JMG1 148 aaKnown RBP10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 H2-OaQ9QWV1 250 aa10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 R3hdm1E9Q9Q2 1135 aaKnown RBP10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Gm21962L7N280 338 aa10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Mt-CybP00158 381 aa10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Csf1rP09581 977 aa10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 LxnP70202 222 aa10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Rrp36Q3UFY0 244 aaKnown RBP10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Ccdc84Q4VA36 332 aaKnown RBP10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Pla2g4eQ50L42 875 aa10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Zfp341Q6PGC9 846 aa10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Nup98Q6PFD9 1816 aaKnown RBP10.43□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Nup62clA2AG10 272 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Armc3A2AU72 881 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Hsf3D0VYS2 492 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Ccdc6D3YZP9 469 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Mdm4O35618 489 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 CopeO89079 308 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Fgfr4Q03142 799 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Emc10Q3TAS6 258 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Zfyve27Q3TXX3 415 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Tigd5Q499M4 642 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Sh3gl2Q62420 352 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Churc1Q6DG52 112 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 PhkbQ7TSH2 1085 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Tmem39bQ810L4 492 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Prpf4Q9DAW6 521 aaKnown RBP10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Rgs17Q9QZB0 210 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Fam171a1A2ATK9 892 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Cyp4f40G3UW81 524 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Mpp3O88910 568 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 CatspereP0DP43 985 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Msh3P13705 1091 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Gas1Q01721 343 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Runx2Q08775 607 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Ccdc160Q3UYG1 323 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Dlg4Q62108 724 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Trim37Q6PCX9 961 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Actl9Q8CG27 415 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Btbd6Q8K2J9 488 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Dppa3Q8QZY3 150 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Med24Q99K74 987 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Bcs1lQ9CZP5 418 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 ArcQ9WV31 396 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Shank3Q4ACU6 1730 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Klhdc7aA2APT9 773 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Tnfrsf11aO35305 625 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Meis2P97367 477 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Fbxw10Q5SUS0 1030 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Sec23ipQ6NZC7 998 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Dync1li2Q6PDL0 492 aaKnown RBP10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Wnk4Q80UE6 1222 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Klhl11Q8CE33 709 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 AdigQ8R400 80 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Ddx39aQ8VDW0 427 aaKnown RBP10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Nudt12Q9DCN1 462 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Ddx20Q9JJY4 825 aaKnown RBP10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Slc26a4Q9R155 780 aa10.42□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Wdr72D3YYM4 1114 aa10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Gm3182K7N6T8 263 aa10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 CaluO35887 315 aa10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Eef1bO70251 225 aaKnown RBP10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Pid1Q3UBG2 217 aa10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Vwa3aQ3UVV9 1148 aa10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 E2f8Q58FA4 860 aa10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 B4galnt4Q766D5 1034 aa10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Ppm1kQ8BXN7 372 aa10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Iqcf1Q9D9K8 182 aa10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 PycardQ9EPB4 193 aa10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Tfr2Q9JKX3 798 aa10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Rnf103Q9R1W3 683 aa10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Nhsl1Q8CAF4 1587 aa10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Myh13B1AR69 1938 aa10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Myh8P13542 1937 aa10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Slc6a16A0A1L1SR47 742 aa10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Psg29Q3URN6 468 aa10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Odr4Q4PJX1 447 aa10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Ppp1r13bQ62415 1087 aa10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Cyfip1Q7TMB8 1253 aa10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Pdzph1Q8BGR1 1238 aa10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Sap130Q8BIH0 1057 aa10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Gprasp2Q8BUY8 826 aa10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Hspbp1Q99P31 357 aaKnown RBP10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Rsrc1Q9DBU6 334 aa10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Ddx24Q9ESV0 857 aaKnown RBP10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 EmcnQ9R0H2 261 aa10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Golgb1E9PVZ8 3238 aa10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Ccdc170D3YXL0 722 aa10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 CnpP16330 420 aa10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Epha3P29319 983 aa10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Kmt5aQ2YDW7 349 aa10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Fam81aQ3UXZ6 364 aa10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Brip1Q5SXJ3 1174 aa10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Vav2Q60992 868 aa10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Adgrg6Q6F3F9 1165 aa10.41□□□□□ -0.74
Pcdh1-201ENSMUST00000057185 Drd5Q8BLD9 478 aa10.41□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 21.9 ms