RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Plppr4Q7TME0 766 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Akap7Q7TN79 314 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 PolrmtQ8BKF1 1207 aaKnown RBP7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Fam78aQ8C552 283 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Mob2Q8VI63 235 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Rpn1Q91YQ5 608 aaKnown RBP7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 B3galt6Q91Z92 325 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Rxfp2Q91ZZ5 737 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Fam76aQ922G2 307 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Lman1Q9D0F3 517 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 RnmtQ9D0L8 465 aaKnown RBP7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 CoasyQ9DBL7 563 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Trpc3Q9QZC1 836 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Large1Q9Z1M7 756 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Gm5737A0A140LI11 423 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Bpifb4A2BGH0 617 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Gm3252E9PUT9 216 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Gm3468E9QAJ8 216 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Nptx2O70340 429 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Tap2P36371 702 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Mcm5P49718 733 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 B230104I21RikQ3USW4 141 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 HarsQ61035 509 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Raver2Q7TPD6 673 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Vat1lQ80TB8 417 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Pnma2Q8BHK0 365 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 LarsQ8BMJ2 1178 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 EtnpplQ8BWU8 499 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Pak2Q8CIN4 524 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 PrameQ9D4Z5 464 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 MycbpQ9EQS3 103 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 PorcnQ9JJJ7 461 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 NumbQ9QZS3 653 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Vav3Q9R0C8 847 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Lypla2Q9WTL7 231 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Ighv11-2A0A075B5R8 117 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Gucy2dA0A0U1RPR8 1117 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Zfp472B0V2W5 534 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Ddx23D3Z0M9 819 aaKnown RBP7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Orc4O88708 433 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Mmp3P28862 477 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Ndufs6P52503 116 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Asprv1Q09PK2 339 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Ankrd40Q5SUE8 363 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Mcf2lQ64096 1149 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Ush1gQ80T11 461 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Scyl2Q8CFE4 930 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Ano2Q8CFW1 1002 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Scrn1Q9CZC8 414 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Paip2Q9D6V8 124 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Eif4e3Q9DBB5 207 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Dnajb7Q9QYI8 312 aa7.48□□□□□ -1.21
Bdnf-201ENSMUST00000053317 SktA2AQ25 1946 aaKnown RBP7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Gm4924A0A1B0GR71 966 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Cd70O55237 195 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 LxnP70202 222 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Pou2f2Q00196 463 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Fam109bQ14B98 259 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Foxn3Q499D0 457 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Fam183bQ5NC57 135 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 PodnQ7TQ62 611 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 RimklbQ80WS1 387 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Tbc1d10cQ8C9V1 444 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Kct2Q8K201 259 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 CalcbQ99MP3 130 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 NenfQ9CQ45 171 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Sppl3Q9CUS9 384 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Cacng4Q9JJV4 327 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Tex21Q9R0U9 575 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Mtmr7Q9Z2C9 660 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 PotegA5H0M4 473 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Csf2raQ00941 388 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Acot6Q32Q92 419 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Adamts18Q4VC17 1219 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Trim9Q8C7M3 817 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Castor2Q8CAB8 329 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Zcchc14Q8VIG0 956 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Dusp6Q9DBB1 381 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Tspoap1Q7TNF8 1846 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Cetn3O35648 167 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Nr2f2P43135 414 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Tarbp2P97473 365 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Pbxip1Q3TVI8 727 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Tgoln2Q62314 363 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Znf280dQ68FE8 974 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Cspg5Q71M36 566 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Rpf1Q7TND5 349 aaKnown RBP7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Mtmr10Q7TPM9 771 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Pank4Q80YV4 820 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 TbckQ8BM85 762 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Ago3Q8CJF9 860 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Acvr1cQ8K348 493 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Etv3Q8R4Z4 513 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Ears2Q9CXJ1 523 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Heatr4E9Q357 955 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Zfpm1O35615 995 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 NfkbieO54910 364 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 MafbP54841 323 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 B3gat3P58158 335 aa7.47□□□□□ -1.21
Bdnf-201ENSMUST00000053317 Map3k7clP58500 142 aa7.47□□□□□ -1.21
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms