RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Npy5rO70342 466 aa8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Gas1Q01721 343 aa8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Nr2e1Q64104 385 aa8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 L3mbtl3Q8BLB7 883 aa8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Gpr180Q8BPS4 441 aa8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Nlrp4aQ8BU40 982 aa8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Q8C6G1 249 aa8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Rnf167Q91XF4 347 aa8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 NptxrQ99J85 493 aa8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Snx24Q9CRB0 169 aa8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 AticQ9CWJ9 592 aaKnown RBP8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Dph5Q9CWQ0 281 aa8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Gm5936A2BG95 728 aa8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Gm5640A3KG49 728 aa8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Casq2O09161 415 aa8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Stk10O55098 966 aa8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Tal1P22091 329 aa8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Pon1P52430 355 aa8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Znf367Q0VDT2 340 aa8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Olfr832Q7TRG9 312 aa8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 NemfQ8CCP0 1064 aaKnown RBP8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 PdxkQ8K183 312 aa8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Sde2Q8K1J5 448 aaKnown RBP8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Foxp3Q99JB6 429 aa8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Mcur1Q9CXD6 340 aa8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Tbx18Q9EPZ6 613 aa8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 PlekQ9JHK5 350 aaKnown RBP8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Cabp5Q9JLK3 173 aa8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Gm5114W4VSN8 858 aa8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 1700016G14RikA0A286YCZ6 238 aa8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Ttll10A4Q9F3 704 aa8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Nedd4P46935 887 aaKnown RBP8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Lilrb3P97484 841 aa8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Kif22Q3V300 660 aa8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Chtf18Q8BIW9 969 aa8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Efl1Q8C0D5 1127 aa8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Scyl2Q8CFE4 930 aa8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Tbc1d23Q8K0F1 684 aa8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Pagr1aQ99L02 253 aa8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Cep19Q9CQA8 163 aa8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Zcrb1Q9CZ96 217 aaKnown RBP8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Acsl3Q9CZW4 720 aaKnown RBP8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Tubgcp4Q9D4F8 667 aa8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Llcfc1Q9D9P8 108 aa8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Gtf2h1Q9DBA9 547 aa8.87□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Arfgef1G3X9K3 1846 aaKnown RBP8.86□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Slfn9B1ARD6 910 aa8.86□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Dnaaf5B9EJR8 853 aa8.86□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Mmp15O54732 657 aa8.86□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Pax7P47239 503 aa8.86□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Ppp4cP97470 307 aa8.86□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Tnfaip8l3Q3TBL6 204 aa8.86□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Mettl14Q3UIK4 456 aa8.86□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Taok1Q5F2E8 1001 aa8.86□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Cnot7Q60809 285 aa8.86□□□□□ -0.99
Cdc40-201ENSMUST00000044166 FdxrQ61578 494 aa8.86□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Foxo6Q70KY4 559 aa8.86□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Smndc1Q8BGT7 238 aaKnown RBP8.86□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Tmem179Q8BHH9 233 aa8.86□□□□□ -0.99
Cdc40-201ENSMUST00000044166 FsbpQ8BKE5 299 aa8.86□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Btbd9Q8C726 612 aa8.86□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Cys1Q8R4T1 145 aa8.86□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Cdk9Q99J95 372 aa8.86□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Zmat2Q9CPW7 199 aa8.86□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Scgb2b20Q9JI02 112 aa8.86□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Orc3Q9JK30 715 aaKnown RBP8.86□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Patl2A2ARM1 529 aa8.86□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Gm10110D3Z5M2 615 aa8.86□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Copb2O55029 905 aa8.86□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Sept7O55131 436 aa8.86□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Lrch2Q3UMG5 773 aa8.86□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Epha7Q61772 998 aa8.86□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Utp14bQ6EJB6 756 aaKnown RBP8.86□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Ift74Q8BKE9 600 aa8.86□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Gcfc2Q8BKT3 769 aa8.86□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Amigo3Q8C2S7 508 aa8.86□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Abcf3Q8K268 709 aa8.86□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Ginm1Q91WR6 327 aa8.86□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Q922C1 641 aa8.86□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Nsmce3Q9CPR8 279 aa8.86□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Mphosph6Q9D1Q1 161 aa8.86□□□□□ -0.99
Cdc40-201ENSMUST00000044166 NapaQ9DB05 295 aa8.86□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Drg2Q9QXB9 364 aaKnown RBP8.86□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Usp51B1AY15 661 aa8.85□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Itga9B8JK39 1036 aa8.85□□□□□ -0.99
Cdc40-201ENSMUST00000044166 A430078G23RikE9Q7Y4 484 aa8.85□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Atp2a2O55143 1044 aaKnown RBP8.85□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Lrrc43Q3V0L5 667 aa8.85□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Gucy2fQ5SDA5 1108 aa8.85□□□□□ -0.99
Cdc40-201ENSMUST00000044166 SkiQ60698 725 aa8.85□□□□□ -0.99
Cdc40-201ENSMUST00000044166 JrkQ60976 557 aa8.85□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Efr3bQ6ZQ18 817 aa8.85□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Ttc16Q8C1F5 767 aa8.85□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Utp6Q8VCY6 597 aaKnown RBP8.85□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Lmcd1Q8VEE1 365 aa8.85□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Pex11aQ9Z211 246 aa8.85□□□□□ -0.99
Cdc40-201ENSMUST00000044166 MtrA6H5Y3 1253 aa8.85□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Cdk2ap1O35207 114 aa8.85□□□□□ -0.99
Cdc40-201ENSMUST00000044166 DnttP09838 530 aa8.85□□□□□ -0.99
Cdc40-201ENSMUST00000044166 Oprl1P35377 367 aa8.85□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 16.6 ms