RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 NficP70255 439 aa24.51■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 WhammQ571B6 793 aa24.51■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Olfr121Q5CZY0 321 aa24.51■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Heatr9Q5QNV8 569 aa24.51■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Ces3aQ63880 571 aa24.51■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Slf1Q8R3P9 1054 aa24.51■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Ces3bQ8VCU1 571 aa24.51■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Dynll2Q9D0M5 89 aa24.51■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Ccdc130Q9D516 385 aa24.51■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 PodxlQ9R0M4 503 aa24.51■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Hmgxb3G3X9M3 1254 aa24.51■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Sstr3P30935 428 aa24.51■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Tlr11Q6R5P0 926 aa24.51■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Acap2Q6ZQK5 770 aa24.51■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 AmotQ8VHG2 1126 aa24.51■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 PawrQ925B0 333 aa24.51■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Txndc9Q9CQ79 226 aa24.51■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 PycardQ9EPB4 193 aa24.51■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Synj2Q9D2G5 1434 aa24.5■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Ccdc144bE9PVZ3 520 aa24.5■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Pid1Q3UBG2 217 aa24.5■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Cyp4x1Q6A152 507 aa24.5■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Ankrd13aQ80UP5 588 aa24.5■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Clca2Q8BG22 942 aa24.5■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Usp53P15975 1069 aa24.5■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Rcn1Q05186 325 aa24.5■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Rundc3bQ6PDC0 408 aa24.5■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Ugp2Q91ZJ5 508 aa24.5■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Abhd2Q9QXM0 425 aa24.5■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Zfp558E9Q1J0 407 aa24.5■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Casp12O08736 419 aa24.5■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 SfnO70456 248 aaKnown RBP24.5■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Chn1Q91V57 459 aa24.5■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Tgm5Q9D7I9 724 aa24.5■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Gm8879F6R3J9 157 aa24.5■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Tlk2O55047 718 aa24.5■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Akr1b1P45376 316 aa24.5■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Trim43bP86448 445 aa24.5■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Skap2Q3UND0 358 aa24.5■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Hdac10Q6P3E7 666 aa24.5■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Tbc1d22bQ80VE5 505 aa24.5■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Catsper3Q80W99 395 aa24.5■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Slc25a24Q8BMD8 475 aa24.5■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Exosc10P56960 887 aaKnown RBP24.49■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Odr4Q4PJX1 447 aa24.49■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Prkaa1Q5EG47 559 aa24.49■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Lig4Q8BTF7 911 aa24.49■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Aldh5a1Q8BWF0 523 aa24.49■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Slc20a2Q80UP8 656 aa24.49■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Kif19Q99PT9 997 aa24.49■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Prss51A0A286YDY8 319 aa24.49■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Gm3187M0QWW3 260 aa24.49■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Rhobtb3Q9CTN4 611 aa24.49■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Nt5c3aQ9D020 331 aa24.49■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Klra10Q9R1G6 266 aa24.49■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Ext2P70428 718 aa24.49■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Arhgef7Q9ES28 862 aa24.49■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Olfr310B2RVZ1 332 aa24.48■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Alppl2P24823 529 aa24.48■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Hspa1aQ61696 641 aa24.48■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Krt31Q61765 416 aa24.48■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Tmcc1Q69ZZ6 649 aa24.48■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Vps37aQ8CHS8 397 aa24.48■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Dgcr8Q9EQM6 773 aa24.48■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Gm10639E9Q6L7 222 aa24.48■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Gsta2P10648 222 aa24.48■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Fam83bQ0VBM2 1012 aa24.48■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 E330034G19RikQ3UWX6 351 aa24.48■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Ces1eQ64176 562 aa24.48■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 ClmnQ8C5W0 1052 aa24.48■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Sugt1Q9CX34 336 aa24.48■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 TriqkB2B9E1 86 aa24.48■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 H2afxP27661 143 aaKnown RBP24.48■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Scfd1Q8BRF7 639 aaKnown RBP24.48■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Q8C1R3 189 aa24.48■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Anapc4Q91W96 807 aa24.48■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Abcc3B2RX12 1523 aa24.48■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Hnrnph2P70333 449 aaKnown RBP24.48■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Nsun7Q14AW5 724 aa24.48■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Galnt5Q8C102 930 aa24.48■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Ttc30a1Q99J38 664 aa24.48■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 KitP05532 979 aa24.47■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Serpina1aP07758 413 aa24.47■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Serpina1cQ00896 412 aa24.47■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Serpina1dQ00897 413 aa24.47■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 P3h2Q8CG71 703 aa24.47■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Mtmr2Q9Z2D1 643 aa24.47■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Tulp4Q9JIL5 1547 aa24.47■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Ugt1a6bK9J7B2 531 aa24.47■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Chp1P61022 195 aa24.47■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Fam92bQ3V2J0 292 aa24.47■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Ugt1a6Q64435 531 aa24.47■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Ugt1a7cQ6ZQM8 531 aa24.47■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Atp6v0d2Q80SY3 350 aa24.47■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Slc7a14Q8BXR1 771 aa24.47■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Tldc1Q8K0P3 455 aa24.47■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Klra17Q9JMA4 273 aa24.47■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Gm28961A0A087WPA5 222 aa24.47■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Gm21858A0A087WQ24 222 aa24.47■■□□□ 1.51
Sh3rf1-201ENSMUST00000034060 Cdh2P15116 906 aa24.47■■□□□ 1.51
Retrieved 100 of 22,080 RNA–protein pairs in 14.3 ms