RNA–Protein interactions for RNA: ENSMUST00000005749.5

Ctr9-201, Transcript of RNA polymerase-associated protein CTR9 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctr9, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9-201ENSMUST00000005749 Ass1P16460 412 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Skap2Q3UND0 358 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Drc1Q3USS3 753 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Hsph1Q61699 858 aaKnown RBP12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 TfrcQ62351 763 aaKnown RBP12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Trim68Q8K243 485 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 OtoaQ8K561 1137 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Pcdhgb4Q91XX6 912 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Me2Q99KE1 589 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Ubiad1Q9DC60 336 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Jag1Q9QXX0 1218 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Gm5114W4VSN8 858 aa12.89□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Gm7086A0A1W2P766 342 aa12.88□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Arhgef26D3YYY8 869 aa12.88□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Myo1aO88329 1043 aa12.88□□□□□ -0.35
Ctr9-201ENSMUST00000005749 GpiP06745 558 aaKnown RBP12.88□□□□□ -0.35
Ctr9-201ENSMUST00000005749 PtpraP18052 829 aa12.88□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Nedd1P33215 660 aa12.88□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Gnl1P36916 607 aa12.88□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Arglu1Q3UL36 271 aaKnown RBP12.88□□□□□ -0.35
Ctr9-201ENSMUST00000005749 RilpQ5ND29 369 aa12.88□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Fam102aQ78T81 392 aa12.88□□□□□ -0.35
Ctr9-201ENSMUST00000005749 PrcpQ7TMR0 491 aa12.88□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Znf365Q8BG89 408 aa12.88□□□□□ -0.35
Ctr9-201ENSMUST00000005749 VcpkmtQ8C436 228 aa12.88□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Rtfdc1Q99K95 307 aa12.88□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Ndufab1Q9CR21 156 aa12.88□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Rhobtb3Q9CTN4 611 aa12.88□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Pik3c2aQ61194 1686 aa12.88□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Per2O54943 1257 aa12.88□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Hoxa11P31311 313 aa12.88□□□□□ -0.35
Ctr9-201ENSMUST00000005749 PltpP55065 493 aa12.88□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Q6GQV0 436 aa12.88□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Prr18Q6PAN7 307 aa12.88□□□□□ -0.35
Ctr9-201ENSMUST00000005749 1700018B08RikQ9DA83 213 aa12.88□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Ttll10A4Q9F3 704 aa12.88□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Gm4307E9PZY4 289 aa12.88□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Gm4312K9J7E2 289 aa12.88□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Ncf2O70145 525 aa12.88□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Lmnb2P21619 596 aaKnown RBP12.88□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Fmr1P35922 614 aaKnown RBP12.88□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Stat4P42228 749 aa12.88□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Uchl4P58321 233 aa12.88□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Yy1Q00899 414 aa12.88□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Oog4Q4G0C7 502 aa12.88□□□□□ -0.35
Ctr9-201ENSMUST00000005749 NostrinQ6WKZ7 506 aa12.88□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Ano5Q75UR0 904 aa12.88□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Thnsl1Q8BH55 747 aa12.88□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Lonp1Q8CGK3 949 aaKnown RBP12.88□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Hip1Q8VD75 1029 aaKnown RBP12.88□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Spdl1Q923A2 608 aa12.88□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Cyp4f40G3UW81 524 aa12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Usp35M0QWN7 1009 aa12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Aoc3O70423 765 aa12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Dync1i1O88485 628 aa12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Pde6bP23440 856 aa12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Psmc4P54775 418 aa12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Slc12a2P55012 1205 aa12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Gjb6P70689 261 aa12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Cct5P80316 541 aaKnown RBP12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Dclk2Q6PGN3 756 aa12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Tbc1d10cQ8C9V1 444 aa12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Prpsap2Q8R574 369 aa12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Zfp64Q99KE8 643 aa12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Zranb2Q9R020 330 aaKnown RBP12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Eftud2O08810 971 aaKnown RBP12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Mcl1P97287 331 aa12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Trim72Q1XH17 477 aa12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Tgfbrap1Q3UR70 860 aa12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Kctd16Q5DTY9 427 aa12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Znf532Q6NXK2 1036 aa12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Kif11Q6P9P6 1052 aa12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Anapc5Q8BTZ4 740 aa12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Ppp4r1Q8K2V1 951 aa12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Bap1Q99PU7 728 aa12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 StambpQ9CQ26 424 aa12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Q9D9D9 101 aa12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Shank2Q80Z38 1476 aa12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Acnat1A2AKK5 416 aa12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Ccdc6D3YZP9 469 aa12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Wnt7aP24383 349 aa12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Lig1P37913 916 aa12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Meis3P97368 378 aa12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Olfr121Q5CZY0 321 aa12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Epc1Q8C9X6 813 aa12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Ddx24Q9ESV0 857 aaKnown RBP12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 PalmdQ9JHU2 551 aa12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 DtnbO70585 659 aa12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 GclcP97494 637 aa12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Pip5kl1Q6U7H8 395 aa12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Celf6Q7TN33 460 aaKnown RBP12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Znf771Q8BJ90 317 aa12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Twf1Q91YR1 350 aaKnown RBP12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Cpsf3Q9QXK7 684 aa12.87□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Lrriq4A6H6A4 596 aa12.86□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Sptlc1O35704 473 aa12.86□□□□□ -0.35
Ctr9-201ENSMUST00000005749 Serpinb2P12388 415 aa12.86□□□□□ -0.35
Ctr9-201ENSMUST00000005749 SftpbP50405 377 aa12.86□□□□□ -0.35
Ctr9-201ENSMUST00000005749 G3bp2P97379 482 aaKnown RBP12.86□□□□□ -0.35
Ctr9-201ENSMUST00000005749 SpoplQ2M2N2 392 aa12.86□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 40.9 ms