RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W YDR262WQ12331 272 aa6.92□□□□□ -1.3
PEX28YHR150W YKL033W-AQ86ZR7 236 aa6.92□□□□□ -1.3
PEX28YHR150W FAB1P34756 2278 aa6.92□□□□□ -1.3
PEX28YHR150W HOP1P20050 605 aa6.91□□□□□ -1.3
PEX28YHR150W CKS1P20486 150 aaKnown RBP6.91□□□□□ -1.3
PEX28YHR150W MCK1P21965 375 aaKnown RBP6.91□□□□□ -1.3
PEX28YHR150W YCL002CP25565 263 aa6.91□□□□□ -1.3
PEX28YHR150W ACB1P31787 87 aa6.91□□□□□ -1.3
PEX28YHR150W YMC1P32331 307 aa6.91□□□□□ -1.3
PEX28YHR150W DOA4P32571 926 aa6.91□□□□□ -1.3
PEX28YHR150W NRP1P32770 719 aaKnown RBP RIP-Chip data6.91□□□□□ -1.3not detected
PEX28YHR150W PDR3P33200 976 aa6.91□□□□□ -1.3
PEX28YHR150W APL3P38065 1025 aa6.91□□□□□ -1.3
PEX28YHR150W QDR1P40475 563 aa6.91□□□□□ -1.3
PEX28YHR150W CAT5P41735 233 aa6.91□□□□□ -1.3
PEX28YHR150W BAP3P41815 604 aa6.91□□□□□ -1.3
PEX28YHR150W IBA57P47158 497 aa6.91□□□□□ -1.3
PEX28YHR150W UTP21Q06078 939 aaPredicted RBP6.91□□□□□ -1.3
PEX28YHR150W ISR1Q06098 443 aaKnown RBP6.91□□□□□ -1.3
PEX28YHR150W WSC3Q12215 556 aa6.91□□□□□ -1.3
PEX28YHR150W RDI1Q12434 202 aa6.91□□□□□ -1.3
PEX28YHR150W FRE6Q12473 712 aa6.91□□□□□ -1.3
PEX28YHR150W YBL029C-AQ3E756 94 aa6.91□□□□□ -1.3
PEX28YHR150W NHP6BP11633 99 aaKnown RBP6.9□□□□□ -1.3
PEX28YHR150W PDA1P16387 420 aaKnown RBP6.9□□□□□ -1.3
PEX28YHR150W BOS1P25385 244 aa6.9□□□□□ -1.3
PEX28YHR150W SSH4P32343 579 aa6.9□□□□□ -1.3
PEX28YHR150W CDC13P32797 924 aaKnown RBP6.9□□□□□ -1.3
PEX28YHR150W ECT1P33412 323 aa6.9□□□□□ -1.3
PEX28YHR150W ECM15P35195 104 aa6.9□□□□□ -1.3
PEX28YHR150W MTH1P35198 433 aa6.9□□□□□ -1.3
PEX28YHR150W AUR1P36107 401 aaPredicted RBP6.9□□□□□ -1.3
PEX28YHR150W IFA38P38286 347 aa6.9□□□□□ -1.3
PEX28YHR150W GEP4P38812 185 aa6.9□□□□□ -1.3
PEX28YHR150W PTI1P39927 425 aaPredicted RBP6.9□□□□□ -1.3
PEX28YHR150W REC102Q02721 264 aa6.9□□□□□ -1.3
PEX28YHR150W PRM15Q03262 622 aa6.9□□□□□ -1.3
PEX28YHR150W YPR109WQ06104 294 aa6.9□□□□□ -1.3
PEX28YHR150W NMA1Q06178 401 aaKnown RBP6.9□□□□□ -1.3
PEX28YHR150W YDL109CQ12103 647 aa6.9□□□□□ -1.3
PEX28YHR150W YDL211CQ12121 372 aa6.9□□□□□ -1.3
PEX28YHR150W YDL177CQ12257 170 aa6.9□□□□□ -1.3
PEX28YHR150W AAC1P04710 309 aa6.9□□□□□ -1.31
PEX28YHR150W CAN1P04817 590 aa6.9□□□□□ -1.31
PEX28YHR150W HAP4P14064 554 aa6.9□□□□□ -1.31
PEX28YHR150W UTR1P21373 530 aa6.9□□□□□ -1.31
PEX28YHR150W ITR1P30605 584 aa6.9□□□□□ -1.31
PEX28YHR150W TCM62P38228 572 aaKnown RBP6.9□□□□□ -1.31
PEX28YHR150W GRE3P38715 327 aaKnown RBP RIP-Chip data6.9□□□□□ -1.31not detected
PEX28YHR150W YJR120WP47157 116 aa6.9□□□□□ -1.31
PEX28YHR150W SAM37P50110 327 aa6.9□□□□□ -1.31
PEX28YHR150W MTL1P53214 551 aa6.9□□□□□ -1.31
PEX28YHR150W POP6P53218 158 aa6.9□□□□□ -1.31
PEX28YHR150W SCS7Q03529 384 aa6.9□□□□□ -1.31
PEX28YHR150W DML1Q03652 475 aa6.9□□□□□ -1.31
PEX28YHR150W VBA1Q04301 562 aa6.9□□□□□ -1.31
PEX28YHR150W SYC1Q08553 188 aaPredicted RBP6.9□□□□□ -1.31
PEX28YHR150W LEU9Q12166 604 aaKnown RBP6.9□□□□□ -1.31
PEX28YHR150W INP53Q12271 1107 aa6.9□□□□□ -1.31
PEX28YHR150W YBR085C-AO43137 85 aa6.89□□□□□ -1.31
PEX28YHR150W ADK1P07170 222 aaKnown RBP6.89□□□□□ -1.31
PEX28YHR150W PUT3P25502 979 aaPredicted RBP6.89□□□□□ -1.31
PEX28YHR150W SRB5P32585 307 aa6.89□□□□□ -1.31
PEX28YHR150W PAU2P32612 120 aa6.89□□□□□ -1.31
PEX28YHR150W SLI1P53304 468 aa6.89□□□□□ -1.31
PEX28YHR150W INP1Q03694 420 aa6.89□□□□□ -1.31
PEX28YHR150W YOR378WQ08902 515 aa6.89□□□□□ -1.31
PEX28YHR150W FEX2Q08991 375 aa6.89□□□□□ -1.31
PEX28YHR150W YPR117WQ06116 2489 aa6.89□□□□□ -1.31
PEX28YHR150W YMR084WA2P2R3 262 aa6.88□□□□□ -1.31
PEX28YHR150W QCR7P00128 127 aa6.88□□□□□ -1.31
PEX28YHR150W MRP1P10662 321 aaKnown RBP6.88□□□□□ -1.31
PEX28YHR150W CDC23P16522 626 aa6.88□□□□□ -1.31
PEX28YHR150W NAM9P27929 486 aa6.88□□□□□ -1.31
PEX28YHR150W ATS1P31386 333 aa6.88□□□□□ -1.31
PEX28YHR150W HOG1P32485 435 aa6.88□□□□□ -1.31
PEX28YHR150W MDL1P33310 695 aa6.88□□□□□ -1.31
PEX28YHR150W WBP1P33767 430 aaKnown RBP6.88□□□□□ -1.31
PEX28YHR150W MRPL16P38064 232 aa6.88□□□□□ -1.31
PEX28YHR150W HRB1P38922 454 aaKnown RBP RIP-Chip data6.88□□□□□ -1.31not detected
PEX28YHR150W ICE2P40499 491 aa6.88□□□□□ -1.31
PEX28YHR150W ECL1P48235 211 aa6.88□□□□□ -1.31
PEX28YHR150W UBC12P52491 188 aa6.88□□□□□ -1.31
PEX28YHR150W GPG1P53130 126 aa6.88□□□□□ -1.31
PEX28YHR150W SAY1P53324 424 aa6.88□□□□□ -1.31
PEX28YHR150W COX20Q04935 205 aa6.88□□□□□ -1.31
PEX28YHR150W KEI1Q06346 221 aa6.88□□□□□ -1.31
PEX28YHR150W TAZ1Q06510 381 aa6.88□□□□□ -1.31
PEX28YHR150W IRC13Q08630 104 aa6.88□□□□□ -1.31
PEX28YHR150W TMS1Q12116 473 aa6.88□□□□□ -1.31
PEX28YHR150W VPS17P32913 551 aa6.87□□□□□ -1.31
PEX28YHR150W VPS51P36116 164 aa6.87□□□□□ -1.31
PEX28YHR150W EDS1P38073 919 aa6.87□□□□□ -1.31
PEX28YHR150W MAL32P38158 584 aa6.87□□□□□ -1.31
PEX28YHR150W PEX32P38292 413 aa6.87□□□□□ -1.31
PEX28YHR150W VNX1P42839 908 aa6.87□□□□□ -1.31
PEX28YHR150W PMT6P42934 759 aa6.87□□□□□ -1.31
PEX28YHR150W MAL12P53341 584 aa6.87□□□□□ -1.31
PEX28YHR150W ASI3P53983 676 aa6.87□□□□□ -1.31
PEX28YHR150W GIC2Q06648 383 aa6.87□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 8 ms