RNA–Protein interactions for RNA: YHL022C

SPO11, Transcript of Meiosis-specific protein that initiates meiotic recombination, yeast

Gene SPO11, Length 1,197 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPO11	YHL022C	CSE1	P33307	960 aa		2.24	□□□□□ -2.05
SPO11	YHL022C	DTD1	Q07648	150 aa	Known RBP	2.24	□□□□□ -2.05
SPO11	YHL022C	TFC7	Q12415	435 aa		2.24	□□□□□ -2.05
SPO11	YHL022C	PRM4	Q12498	284 aa		2.24	□□□□□ -2.05
SPO11	YHL022C	RGS2	Q99188	309 aa		2.24	□□□□□ -2.05
SPO11	YHL022C	ALP1	P38971	573 aa		2.23	□□□□□ -2.05
SPO11	YHL022C	ASP1	P38986	381 aa	Predicted RBP	2.23	□□□□□ -2.05
SPO11	YHL022C	YFR045W	P43617	309 aa		2.23	□□□□□ -2.05
SPO11	YHL022C	MRX9	Q07349	420 aa	Known RBP	2.23	□□□□□ -2.05
SPO11	YHL022C	SPO24	Q3E752	67 aa		2.23	□□□□□ -2.05
SPO11	YHL022C	NBL1	Q3E7Y6	73 aa		2.23	□□□□□ -2.05
SPO11	YHL022C	TDH2	P00358	332 aa	Known RBP	2.22	□□□□□ -2.05
SPO11	YHL022C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	2.22	□□□□□ -2.05	not detected
SPO11	YHL022C	YLL053C	P0CD98	152 aa		2.22	□□□□□ -2.05
SPO11	YHL022C	BUD2	P33314	1104 aa		2.22	□□□□□ -2.05
SPO11	YHL022C	PET8	P38921	284 aa		2.22	□□□□□ -2.05
SPO11	YHL022C	ACT1	P60010	375 aa	Known RBP	2.22	□□□□□ -2.05
SPO11	YHL022C	YPL080C	Q02826	108 aa		2.22	□□□□□ -2.05
SPO11	YHL022C	CLP1	Q08685	445 aa	Predicted RBP	2.22	□□□□□ -2.05
SPO11	YHL022C	KRE1	P17260	313 aa		2.21	□□□□□ -2.06
SPO11	YHL022C	CDC42	P19073	191 aa		2.21	□□□□□ -2.06
SPO11	YHL022C	PHO84	P25297	587 aa	Known RBP	2.21	□□□□□ -2.06
SPO11	YHL022C	RBK1	P25332	333 aa		2.21	□□□□□ -2.06
SPO11	YHL022C	YKR032W	P36127	104 aa		2.21	□□□□□ -2.06
SPO11	YHL022C	ECO1	P43605	281 aa		2.21	□□□□□ -2.06
SPO11	YHL022C	PXR1	P53335	271 aa	Predicted RBP	2.21	□□□□□ -2.06
SPO11	YHL022C	YNL040W	P53960	456 aa	Predicted RBP	2.21	□□□□□ -2.06
SPO11	YHL022C	RDL2	Q08742	149 aa	Known RBP	2.21	□□□□□ -2.06
SPO11	YHL022C	IES3	Q12345	250 aa		2.21	□□□□□ -2.06
SPO11	YHL022C	ATG12	P38316	186 aa		2.2	□□□□□ -2.06
SPO11	YHL022C	YGP1	P38616	354 aa	Known RBP	2.2	□□□□□ -2.06
SPO11	YHL022C	PRP39	P39682	629 aa	Known RBP	2.2	□□□□□ -2.06
SPO11	YHL022C	YER084W	P40057	128 aa		2.2	□□□□□ -2.06
SPO11	YHL022C	BTT1	P40314	149 aa	Predicted RBP	2.2	□□□□□ -2.06
SPO11	YHL022C	YIL089W	P40500	205 aa		2.2	□□□□□ -2.06
SPO11	YHL022C	AQR1	P53943	586 aa		2.2	□□□□□ -2.06
SPO11	YHL022C	RGM1	Q00453	211 aa		2.2	□□□□□ -2.06
SPO11	YHL022C	DBP9	Q06218	594 aa	Known RBP	2.2	□□□□□ -2.06
SPO11	YHL022C	YPL245W	Q12179	454 aa	Known RBP	2.2	□□□□□ -2.06
SPO11	YHL022C	ERP3	Q12403	225 aa		2.19	□□□□□ -2.06
SPO11	YHL022C	MRX4	Q12467	430 aa		2.19	□□□□□ -2.06
SPO11	YHL022C	CBP2	P03874	630 aa	Predicted RBP	2.18	□□□□□ -2.06
SPO11	YHL022C	RSA4	P25382	515 aa	Known RBP	2.18	□□□□□ -2.06
SPO11	YHL022C	MEI5	P32489	222 aa		2.18	□□□□□ -2.06
SPO11	YHL022C	LAS1	P36146	502 aa	Predicted RBP	2.18	□□□□□ -2.06
SPO11	YHL022C	EDC2	P40023	145 aa	Predicted RBP	2.18	□□□□□ -2.06
SPO11	YHL022C	FYV8	P46949	817 aa	Known RBP	2.18	□□□□□ -2.06
SPO11	YHL022C	YNR066C	P53752	436 aa		2.18	□□□□□ -2.06
SPO11	YHL022C	PEX30	Q06169	523 aa		2.18	□□□□□ -2.06
SPO11	YHL022C	FEX1	Q08913	375 aa		2.18	□□□□□ -2.06
SPO11	YHL022C	FEX2	Q08991	375 aa		2.18	□□□□□ -2.06
SPO11	YHL022C	PRE7	P23724	241 aa	Known RBP	2.17	□□□□□ -2.06
SPO11	YHL022C	VPH2	P32341	215 aa		2.17	□□□□□ -2.06
SPO11	YHL022C	SUR1	P33300	382 aa		2.17	□□□□□ -2.06
SPO11	YHL022C	MED6	P38782	295 aa		2.17	□□□□□ -2.06
SPO11	YHL022C	TAF6	P53040	516 aa		2.17	□□□□□ -2.06
SPO11	YHL022C	CUE3	P53137	624 aa	Known RBP	2.17	□□□□□ -2.06
SPO11	YHL022C	CDD1	Q06549	142 aa		2.17	□□□□□ -2.06
SPO11	YHL022C	YLR012C	Q07927	99 aa		2.17	□□□□□ -2.06
SPO11	YHL022C	NFI1	Q12216	726 aa		2.17	□□□□□ -2.06
SPO11	YHL022C	POT1	P27796	417 aa	Known RBP RIP-Chip data	2.16	□□□□□ -2.06	not detected
SPO11	YHL022C	UFD1	P53044	361 aa		2.16	□□□□□ -2.06
SPO11	YHL022C	YNL146W	P53906	100 aa		2.16	□□□□□ -2.06
SPO11	YHL022C	PML1	Q07930	204 aa	Predicted RBP	2.16	□□□□□ -2.06
SPO11	YHL022C	VIK1	Q12045	647 aa		2.16	□□□□□ -2.06
SPO11	YHL022C	YOL163W	P0CF20	169 aa		2.15	□□□□□ -2.07
SPO11	YHL022C	ACB1	P31787	87 aa		2.15	□□□□□ -2.07
SPO11	YHL022C	YGL114W	P53134	725 aa		2.15	□□□□□ -2.07
SPO11	YHL022C	RCF1	Q03713	159 aa		2.15	□□□□□ -2.07
SPO11	YHL022C	RVB1	Q03940	463 aa	Known RBP	2.15	□□□□□ -2.07
SPO11	YHL022C	ERD1	P16151	362 aa		2.14	□□□□□ -2.07
SPO11	YHL022C	AIM29	P36154	155 aa		2.14	□□□□□ -2.07
SPO11	YHL022C	YBL081W	P38180	368 aa	Known RBP	2.14	□□□□□ -2.07
SPO11	YHL022C	SIF2	P38262	535 aa		2.14	□□□□□ -2.07
SPO11	YHL022C	YHL044W	P38727	235 aa		2.14	□□□□□ -2.07
SPO11	YHL022C	YNL095C	P53932	642 aa		2.14	□□□□□ -2.07
SPO11	YHL022C	UBX2	Q04228	584 aa		2.14	□□□□□ -2.07
SPO11	YHL022C	YOR292C	Q08743	309 aa		2.14	□□□□□ -2.07
SPO11	YHL022C	TAL1	P15019	335 aa	Known RBP	2.13	□□□□□ -2.07
SPO11	YHL022C	SNF6	P18888	332 aa		2.13	□□□□□ -2.07
SPO11	YHL022C	PES4	P39684	611 aa		2.13	□□□□□ -2.07
SPO11	YHL022C	YER188W	P40103	239 aa		2.13	□□□□□ -2.07
SPO11	YHL022C	SEC13	Q04491	297 aa	Known RBP	2.13	□□□□□ -2.07
SPO11	YHL022C	BUR2	Q05949	395 aa		2.13	□□□□□ -2.07
SPO11	YHL022C	YAK1	P14680	807 aa		2.12	□□□□□ -2.07
SPO11	YHL022C	VMA5	P31412	392 aa	Known RBP	2.12	□□□□□ -2.07
SPO11	YHL022C	YPS1	P32329	569 aa		2.12	□□□□□ -2.07
SPO11	YHL022C	PCL7	P40186	285 aa		2.12	□□□□□ -2.07
SPO11	YHL022C	YGR016W	P53209	190 aa		2.12	□□□□□ -2.07
SPO11	YHL022C	YDR262W	Q12331	272 aa		2.12	□□□□□ -2.07
SPO11	YHL022C	GPX1	P36014	167 aa		2.11	□□□□□ -2.07
SPO11	YHL022C	YBR062C	P38239	180 aa		2.11	□□□□□ -2.07
SPO11	YHL022C	SOP4	P39543	234 aa	Predicted RBP	2.11	□□□□□ -2.07
SPO11	YHL022C	YFL040W	P43562	540 aa		2.11	□□□□□ -2.07
SPO11	YHL022C	MNN5	P46982	586 aa		2.11	□□□□□ -2.07
SPO11	YHL022C	YAL063C-A	Q3E791	96 aa		2.11	□□□□□ -2.07
SPO11	YHL022C	LIF1	P53150	421 aa		2.1	□□□□□ -2.07
SPO11	YHL022C	SYF2	P53277	215 aa	Predicted RBP	2.1	□□□□□ -2.07
SPO11	YHL022C	YGR168C	P53293	376 aa		2.1	□□□□□ -2.07
SPO11	YHL022C	YCR025C	P25352	136 aa		2.09	□□□□□ -2.07

Retrieved 100 of 5,963 RNA–protein pairs in 36.7 ms