RNA–Protein interactions for RNA: ENST00000642088.1

CASC19-278, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 2,091 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-278ENST00000642088 CLDND1Q9NY35 253 aa5.07□□□□□ -1.6
CASC19-278ENST00000642088 GPR160Q9UJ42 338 aa5.07□□□□□ -1.6
CASC19-278ENST00000642088 ASAP1Q9ULH1 1129 aa5.07□□□□□ -1.6
CASC19-278ENST00000642088 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.07□□□□□ -1.6
CASC19-278ENST00000642088 TIMM13Q9Y5L4 95 aaPredicted RBP5.07□□□□□ -1.6
CASC19-278ENST00000642088 TAF6LQ9Y6J9 622 aa5.07□□□□□ -1.6
CASC19-278ENST00000642088 THSD7AQ9UPZ6 1657 aa5.07□□□□□ -1.6
CASC19-278ENST00000642088 JCADQ9P266 1359 aa5.07□□□□□ -1.6
CASC19-278ENST00000642088 MED23Q9ULK4 1368 aa5.07□□□□□ -1.6
CASC19-278ENST00000642088 ZNF891A8MT65 544 aaPredicted RBP5.06□□□□□ -1.6
CASC19-278ENST00000642088 NRDCO43847 1150 aa5.06□□□□□ -1.6
CASC19-278ENST00000642088 CYP19A1P11511 503 aaPredicted RBP5.06□□□□□ -1.6
CASC19-278ENST00000642088 GDNFP39905 211 aa5.06□□□□□ -1.6
CASC19-278ENST00000642088 IFIT5Q13325 482 aaKnown RBP5.06□□□□□ -1.6
CASC19-278ENST00000642088 CCDC158Q5M9N0 1113 aa5.06□□□□□ -1.6
CASC19-278ENST00000642088 HLA-DQA1Q5Y7H0 255 aa5.06□□□□□ -1.6
CASC19-278ENST00000642088 CBLL1Q75N03 491 aa5.06□□□□□ -1.6
CASC19-278ENST00000642088 RUFY3Q7L099 469 aa5.06□□□□□ -1.6
CASC19-278ENST00000642088 CCDC83Q8IWF9 413 aa5.06□□□□□ -1.6
CASC19-278ENST00000642088 IFNL3Q8IZI9 196 aa5.06□□□□□ -1.6
CASC19-278ENST00000642088 CHMP4CQ96CF2 233 aa5.06□□□□□ -1.6
CASC19-278ENST00000642088 ASIC4Q96FT7 647 aa5.06□□□□□ -1.6
CASC19-278ENST00000642088 JAKMIP1Q96N16 626 aaKnown RBP5.06□□□□□ -1.6
CASC19-278ENST00000642088 CNPY2Q9Y2B0 182 aa5.06□□□□□ -1.6
CASC19-278ENST00000642088 CYP46A1Q9Y6A2 500 aa5.06□□□□□ -1.6
CASC19-278ENST00000642088 SH3TC1Q8TE82 1336 aa5.06□□□□□ -1.6
CASC19-278ENST00000642088 RPAP1Q9BWH6 1393 aaPredicted RBP5.06□□□□□ -1.6
CASC19-278ENST00000642088 COL24A1Q17RW2 1714 aa5.06□□□□□ -1.6
CASC19-278ENST00000642088 CCDC163A0A0D9SF12 145 aa5.06□□□□□ -1.6
CASC19-278ENST00000642088 A0A1W2PQ45 241 aaPredicted RBP5.06□□□□□ -1.6
CASC19-278ENST00000642088 A0A1W2PQY0 241 aa5.06□□□□□ -1.6
CASC19-278ENST00000642088 ANKRD18BA2A2Z9 1011 aa5.06□□□□□ -1.6
CASC19-278ENST00000642088 FIBPO43427 364 aa5.06□□□□□ -1.6
CASC19-278ENST00000642088 OPA1O60313 960 aa5.06□□□□□ -1.6
CASC19-278ENST00000642088 LTFP02788 710 aa5.06□□□□□ -1.6
CASC19-278ENST00000642088 GRK2P25098 689 aa5.06□□□□□ -1.6
CASC19-278ENST00000642088 GRK3P35626 688 aa5.06□□□□□ -1.6
CASC19-278ENST00000642088 KIR2DL1P43626 348 aaPredicted RBP5.06□□□□□ -1.6
CASC19-278ENST00000642088 KIR2DL2P43627 348 aaPredicted RBP5.06□□□□□ -1.6
CASC19-278ENST00000642088 PARP10Q53GL7 1025 aa5.06□□□□□ -1.6
CASC19-278ENST00000642088 PIK3R6Q5UE93 754 aa5.06□□□□□ -1.6
CASC19-278ENST00000642088 VPS53Q5VIR6 699 aa5.06□□□□□ -1.6
CASC19-278ENST00000642088 SH3RF2Q8TEC5 729 aa5.06□□□□□ -1.6
CASC19-278ENST00000642088 MAP4K1Q92918 833 aa5.06□□□□□ -1.6
CASC19-278ENST00000642088 SYTL4Q96C24 671 aaPredicted RBP5.06□□□□□ -1.6
CASC19-278ENST00000642088 MAGEB10Q96LZ2 347 aaPredicted RBP5.06□□□□□ -1.6
CASC19-278ENST00000642088 SYT3Q9BQG1 590 aa5.06□□□□□ -1.6
CASC19-278ENST00000642088 ALDH8A1Q9H2A2 487 aaPredicted RBP5.06□□□□□ -1.6
CASC19-278ENST00000642088 HELLSQ9NRZ9 838 aa5.06□□□□□ -1.6
CASC19-278ENST00000642088 ADGRE2Q9UHX3 823 aa5.06□□□□□ -1.6
CASC19-278ENST00000642088 DBNLQ9UJU6 430 aaKnown RBP5.06□□□□□ -1.6
CASC19-278ENST00000642088 LIMCH1Q9UPQ0 1083 aa5.06□□□□□ -1.6
CASC19-278ENST00000642088 TELO2Q9Y4R8 837 aa5.06□□□□□ -1.6
CASC19-278ENST00000642088 A0A0D9SFI3 127 aa5.05□□□□□ -1.6
CASC19-278ENST00000642088 TRAF5O00463 557 aa5.05□□□□□ -1.6
CASC19-278ENST00000642088 AMY2AP04746 511 aa5.05□□□□□ -1.6
CASC19-278ENST00000642088 CSF1RP07333 972 aa5.05□□□□□ -1.6
CASC19-278ENST00000642088 ZFYP08048 801 aaPredicted RBP5.05□□□□□ -1.6
CASC19-278ENST00000642088 YBX3P16989 372 aaKnown RBP eCLIP5.05□□□□□ -1.6
CASC19-278ENST00000642088 AMY2BP19961 511 aa5.05□□□□□ -1.6
CASC19-278ENST00000642088 STAT3P40763 770 aa5.05□□□□□ -1.6
CASC19-278ENST00000642088 ID4P47928 161 aa5.05□□□□□ -1.6
CASC19-278ENST00000642088 DNM2P50570 870 aa5.05□□□□□ -1.6
CASC19-278ENST00000642088 DUSP4Q13115 394 aa5.05□□□□□ -1.6
CASC19-278ENST00000642088 NECTIN1Q15223 517 aa5.05□□□□□ -1.6
CASC19-278ENST00000642088 SEC23AQ15436 765 aa5.05□□□□□ -1.6
CASC19-278ENST00000642088 SLC14A2Q15849 920 aa5.05□□□□□ -1.6
CASC19-278ENST00000642088 MCMDC2Q4G0Z9 681 aa5.05□□□□□ -1.6
CASC19-278ENST00000642088 ATG9AQ7Z3C6 839 aa5.05□□□□□ -1.6
CASC19-278ENST00000642088 OSTM1Q86WC4 334 aa5.05□□□□□ -1.6
CASC19-278ENST00000642088 ZC3H7AQ8IWR0 971 aaKnown RBP5.05□□□□□ -1.6
CASC19-278ENST00000642088 RPUSD2Q8IZ73 545 aaKnown RBP5.05□□□□□ -1.6
CASC19-278ENST00000642088 Q8N1Y9 231 aa5.05□□□□□ -1.6
CASC19-278ENST00000642088 NXPE1Q8N323 547 aa5.05□□□□□ -1.6
CASC19-278ENST00000642088 ANKS4BQ8N8V4 417 aa5.05□□□□□ -1.6
CASC19-278ENST00000642088 KBTBD3Q8NAB2 608 aa5.05□□□□□ -1.6
CASC19-278ENST00000642088 MYLIPQ8WY64 445 aa5.05□□□□□ -1.6
CASC19-278ENST00000642088 TMEM169Q96HH4 297 aa5.05□□□□□ -1.6
CASC19-278ENST00000642088 NEUROD6Q96NK8 337 aa5.05□□□□□ -1.6
CASC19-278ENST00000642088 H2AFY2Q9P0M6 372 aaPredicted RBP5.05□□□□□ -1.6
CASC19-278ENST00000642088 ACSL6Q9UKU0 697 aa5.05□□□□□ -1.6
CASC19-278ENST00000642088 PLAAQ9Y263 795 aa5.05□□□□□ -1.6
CASC19-278ENST00000642088 ZNF652Q9Y2D9 606 aa5.05□□□□□ -1.6
CASC19-278ENST00000642088 ATP6V1DQ9Y5K8 247 aa5.05□□□□□ -1.6
CASC19-278ENST00000642088 RBM8AQ9Y5S9 174 aaKnown RBP5.05□□□□□ -1.6
CASC19-278ENST00000642088 KIAA1551Q9HCM1 1747 aa5.05□□□□□ -1.6
CASC19-278ENST00000642088 SPATA31A6Q5VVP1 1343 aa5.05□□□□□ -1.6
CASC19-278ENST00000642088 WDR33Q9C0J8 1336 aaKnown RBP5.05□□□□□ -1.6
CASC19-278ENST00000642088 CCDC66A2RUB6 948 aa5.04□□□□□ -1.6
CASC19-278ENST00000642088 VPS37CA5D8V6 355 aaPredicted RBP5.04□□□□□ -1.6
CASC19-278ENST00000642088 VIL1P09327 827 aaKnown RBP5.04□□□□□ -1.6
CASC19-278ENST00000642088 HMGB1P09429 215 aaKnown RBP5.04□□□□□ -1.6
CASC19-278ENST00000642088 IFIT1P09914 478 aaKnown RBP5.04□□□□□ -1.6
CASC19-278ENST00000642088 GLI4P10075 376 aa5.04□□□□□ -1.6
CASC19-278ENST00000642088 PDE6AP16499 860 aa5.04□□□□□ -1.6
CASC19-278ENST00000642088 CDKN1CP49918 316 aaPredicted RBP5.04□□□□□ -1.6
CASC19-278ENST00000642088 JAM2P57087 298 aa5.04□□□□□ -1.6
CASC19-278ENST00000642088 RPL11P62913 178 aaKnown RBP5.04□□□□□ -1.6
CASC19-278ENST00000642088 CCDC173Q0VFZ6 552 aa5.04□□□□□ -1.6
CASC19-278ENST00000642088 STK3Q13188 491 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms