RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 SAMD11Q96NU1 681 aa19.19■□□□□ 0.66
PHGDH-227ENST00000641811 RUSC1Q9BVN2 902 aa19.19■□□□□ 0.66
PHGDH-227ENST00000641811 RNF216Q9NWF9 866 aaPredicted RBP19.19■□□□□ 0.66
PHGDH-227ENST00000641811 TSPAN1O60635 241 aa19.18■□□□□ 0.66
PHGDH-227ENST00000641811 ERLIN2O94905 339 aa19.18■□□□□ 0.66
PHGDH-227ENST00000641811 SSBP05455 408 aaKnown RBP eCLIP19.18■□□□□ 0.66
PHGDH-227ENST00000641811 LONP1P36776 959 aaKnown RBP19.18■□□□□ 0.66
PHGDH-227ENST00000641811 UBA7P41226 1012 aa19.18■□□□□ 0.66
PHGDH-227ENST00000641811 GPM6BQ13491 265 aa19.18■□□□□ 0.66
PHGDH-227ENST00000641811 AMHR2Q16671 573 aa19.18■□□□□ 0.66
PHGDH-227ENST00000641811 TMEM119Q4V9L6 283 aa19.18■□□□□ 0.66
PHGDH-227ENST00000641811 CLLU1OSQ5K130 101 aa19.18■□□□□ 0.66
PHGDH-227ENST00000641811 SPECC1Q5M775 1068 aa19.18■□□□□ 0.66
PHGDH-227ENST00000641811 RINT1Q6NUQ1 792 aa19.18■□□□□ 0.66
PHGDH-227ENST00000641811 USP49Q70CQ1 688 aa19.18■□□□□ 0.66
PHGDH-227ENST00000641811 LRRC15Q8TF66 581 aa19.18■□□□□ 0.66
PHGDH-227ENST00000641811 LPPQ93052 612 aa19.18■□□□□ 0.66
PHGDH-227ENST00000641811 CPB2Q96IY4 423 aa19.18■□□□□ 0.66
PHGDH-227ENST00000641811 CDK5RAP3Q96JB5 506 aa19.18■□□□□ 0.66
PHGDH-227ENST00000641811 CLIC6Q96NY7 704 aa19.18■□□□□ 0.66
PHGDH-227ENST00000641811 CASD1Q96PB1 797 aa19.18■□□□□ 0.66
PHGDH-227ENST00000641811 CSRNP2Q9H175 543 aa19.18■□□□□ 0.66
PHGDH-227ENST00000641811 TFIP11Q9UBB9 837 aaKnown RBP19.18■□□□□ 0.66
PHGDH-227ENST00000641811 FBXO2Q9UK22 296 aaPredicted RBP19.18■□□□□ 0.66
PHGDH-227ENST00000641811 MEIS3P2A8K0S8 358 aa19.17■□□□□ 0.66
PHGDH-227ENST00000641811 B4GALT5O43286 388 aa19.17■□□□□ 0.66
PHGDH-227ENST00000641811 GTPBP6O43824 516 aaPredicted RBP19.17■□□□□ 0.66
PHGDH-227ENST00000641811 ZSCAN22P10073 491 aaPredicted RBP19.17■□□□□ 0.66
PHGDH-227ENST00000641811 POU3F3P20264 500 aaPredicted RBP19.17■□□□□ 0.66
PHGDH-227ENST00000641811 KARSQ15046 597 aaKnown RBP19.17■□□□□ 0.66
PHGDH-227ENST00000641811 FOXD4L6Q3SYB3 417 aaPredicted RBP19.17■□□□□ 0.66
PHGDH-227ENST00000641811 UBXN11Q5T124 520 aa19.17■□□□□ 0.66
PHGDH-227ENST00000641811 FOXD4L3Q6VB84 417 aaPredicted RBP19.17■□□□□ 0.66
PHGDH-227ENST00000641811 C1orf186Q6ZWK4 172 aa19.17■□□□□ 0.66
PHGDH-227ENST00000641811 HELQQ8TDG4 1101 aa19.17■□□□□ 0.66
PHGDH-227ENST00000641811 EPSTI1Q96J88 318 aa19.17■□□□□ 0.66
PHGDH-227ENST00000641811 TRAIPQ9BWF2 469 aa19.17■□□□□ 0.66
PHGDH-227ENST00000641811 NFKBIZQ9BYH8 718 aa19.17■□□□□ 0.66
PHGDH-227ENST00000641811 NT5C3AQ9H0P0 336 aa19.17■□□□□ 0.66
PHGDH-227ENST00000641811 FAM105AQ9NUU6 356 aa19.17■□□□□ 0.66
PHGDH-227ENST00000641811 TYW1Q9NV66 732 aaKnown RBP19.17■□□□□ 0.66
PHGDH-227ENST00000641811 NLRC5Q86WI3 1866 aa19.17■□□□□ 0.66
PHGDH-227ENST00000641811 FNDC1Q4ZHG4 1894 aaPredicted RBP19.16■□□□□ 0.66
PHGDH-227ENST00000641811 H3BNC9 293 aa19.16■□□□□ 0.66
PHGDH-227ENST00000641811 HIP1RO75146 1068 aa19.16■□□□□ 0.66
PHGDH-227ENST00000641811 EOMESO95936 686 aa19.16■□□□□ 0.66
PHGDH-227ENST00000641811 PLA2G4BP0C869 781 aa19.16■□□□□ 0.66
PHGDH-227ENST00000641811 RAD51AP2Q09MP3 1159 aa19.16■□□□□ 0.66
PHGDH-227ENST00000641811 SLC39A14Q15043 492 aa19.16■□□□□ 0.66
PHGDH-227ENST00000641811 CDCA2Q69YH5 1023 aaPredicted RBP19.16■□□□□ 0.66
PHGDH-227ENST00000641811 LRRC55Q6ZSA7 311 aa19.16■□□□□ 0.66
PHGDH-227ENST00000641811 CDR2LQ86X02 465 aaPredicted RBP19.16■□□□□ 0.66
PHGDH-227ENST00000641811 DAW1Q8N136 415 aa19.16■□□□□ 0.66
PHGDH-227ENST00000641811 KIFC3Q9BVG8 833 aa19.16■□□□□ 0.66
PHGDH-227ENST00000641811 TMEM117Q9H0C3 514 aa19.16■□□□□ 0.66
PHGDH-227ENST00000641811 PRDM6Q9NQX0 595 aa19.16■□□□□ 0.66
PHGDH-227ENST00000641811 PCDHB2Q9Y5E7 798 aa19.16■□□□□ 0.66
PHGDH-227ENST00000641811 SRPRBQ9Y5M8 271 aaKnown RBP19.16■□□□□ 0.66
PHGDH-227ENST00000641811 PRRC2BQ5JSZ5 2229 aaKnown RBP19.16■□□□□ 0.66
PHGDH-227ENST00000641811 PRUNE2Q8WUY3 3088 aa19.15■□□□□ 0.66
PHGDH-227ENST00000641811 REV3LO60673 3130 aa19.15■□□□□ 0.66
PHGDH-227ENST00000641811 TTLL13PA6NNM8 815 aa19.15■□□□□ 0.66
PHGDH-227ENST00000641811 C5orf67F2Z3F1 127 aa19.15■□□□□ 0.66
PHGDH-227ENST00000641811 HOXA2O43364 376 aa19.15■□□□□ 0.66
PHGDH-227ENST00000641811 F13A1P00488 732 aa19.15■□□□□ 0.66
PHGDH-227ENST00000641811 ARF4P18085 180 aaPredicted RBP19.15■□□□□ 0.66
PHGDH-227ENST00000641811 LIG1P18858 919 aa19.15■□□□□ 0.66
PHGDH-227ENST00000641811 PLCG1P19174 1290 aa19.15■□□□□ 0.66
PHGDH-227ENST00000641811 NAMPTP43490 491 aa19.15■□□□□ 0.66
PHGDH-227ENST00000641811 SLC12A3P55017 1021 aa19.15■□□□□ 0.66
PHGDH-227ENST00000641811 MAPK7Q13164 816 aa19.15■□□□□ 0.66
PHGDH-227ENST00000641811 SPOUT1Q5T280 376 aaKnown RBP19.15■□□□□ 0.66
PHGDH-227ENST00000641811 ZBTB8OSQ8IWT0 167 aa19.15■□□□□ 0.66
PHGDH-227ENST00000641811 ABI1Q8IZP0 508 aa19.15■□□□□ 0.66
PHGDH-227ENST00000641811 SYT2Q8N9I0 419 aaPredicted RBP19.15■□□□□ 0.66
PHGDH-227ENST00000641811 DEPTORQ8TB45 409 aa19.15■□□□□ 0.66
PHGDH-227ENST00000641811 KIFAP3Q92845 792 aa19.15■□□□□ 0.66
PHGDH-227ENST00000641811 CALML4Q96GE6 196 aa19.15■□□□□ 0.66
PHGDH-227ENST00000641811 EIF2AQ9BY44 585 aaKnown RBP19.15■□□□□ 0.66
PHGDH-227ENST00000641811 CWH43Q9H720 699 aa19.15■□□□□ 0.66
PHGDH-227ENST00000641811 USP20Q9Y2K6 914 aa19.15■□□□□ 0.66
PHGDH-227ENST00000641811 RWDD3Q9Y3V2 267 aa19.15■□□□□ 0.66
PHGDH-227ENST00000641811 RALGAPA2Q2PPJ7 1873 aa19.15■□□□□ 0.66
PHGDH-227ENST00000641811 KIAA1671Q9BY89 1806 aa19.14■□□□□ 0.65
PHGDH-227ENST00000641811 NPHP3-ACAD11A0A0J9YXS1 232 aa19.14■□□□□ 0.65
PHGDH-227ENST00000641811 SFI1A8K8P3 1242 aa19.14■□□□□ 0.65
PHGDH-227ENST00000641811 GRM6O15303 877 aa19.14■□□□□ 0.65
PHGDH-227ENST00000641811 ZNF623O75123 536 aa19.14■□□□□ 0.65
PHGDH-227ENST00000641811 RB1P06400 928 aa19.14■□□□□ 0.65
PHGDH-227ENST00000641811 SKIP12755 728 aa19.14■□□□□ 0.65
PHGDH-227ENST00000641811 AXLP30530 894 aa19.14■□□□□ 0.65
PHGDH-227ENST00000641811 NASPP49321 788 aaPredicted RBP19.14■□□□□ 0.65
PHGDH-227ENST00000641811 RAB27AP51159 221 aa19.14■□□□□ 0.65
PHGDH-227ENST00000641811 DHX8Q14562 1220 aaKnown RBP19.14■□□□□ 0.65
PHGDH-227ENST00000641811 PCBP1Q15365 356 aaKnown RBP eCLIP19.14■□□□□ 0.652e-6■■■□□ 14.6
PHGDH-227ENST00000641811 RASSF8Q8NHQ8 419 aa19.14■□□□□ 0.65
PHGDH-227ENST00000641811 IFT74Q96LB3 600 aa19.14■□□□□ 0.65
PHGDH-227ENST00000641811 FZD8Q9H461 694 aa19.14■□□□□ 0.65
PHGDH-227ENST00000641811 ALG13Q9NP73 1137 aaKnown RBP19.14■□□□□ 0.65
PHGDH-227ENST00000641811 BLOC1S4Q9NUP1 217 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms