RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 IER5Q5VY09 327 aa8.34□□□□□ -1.07
PHGDH-225ENST00000641720 LARP1BQ659C4 914 aaKnown RBP8.34□□□□□ -1.07
PHGDH-225ENST00000641720 LLGL2Q6P1M3 1020 aa8.34□□□□□ -1.07
PHGDH-225ENST00000641720 XRRA1Q6P2D8 792 aa8.34□□□□□ -1.07
PHGDH-225ENST00000641720 POTEGQ6S5H5 508 aa8.34□□□□□ -1.07
PHGDH-225ENST00000641720 KCNT2Q6UVM3 1135 aa8.34□□□□□ -1.07
PHGDH-225ENST00000641720 RSPH3Q86UC2 560 aa8.34□□□□□ -1.07
PHGDH-225ENST00000641720 ZNF598Q86UK7 904 aaKnown RBP8.34□□□□□ -1.07
PHGDH-225ENST00000641720 KIAA0319LQ8IZA0 1049 aa8.34□□□□□ -1.07
PHGDH-225ENST00000641720 MAML2Q8IZL2 1156 aaPredicted RBP8.34□□□□□ -1.07
PHGDH-225ENST00000641720 C12orf76Q8N812 135 aaPredicted RBP8.34□□□□□ -1.07
PHGDH-225ENST00000641720 MRPL43Q8N983 215 aaKnown RBP8.34□□□□□ -1.07
PHGDH-225ENST00000641720 DTWD2Q8NBA8 298 aa8.34□□□□□ -1.07
PHGDH-225ENST00000641720 SUMF1Q8NBK3 374 aa8.34□□□□□ -1.07
PHGDH-225ENST00000641720 BCL7CQ8WUZ0 217 aaPredicted RBP8.34□□□□□ -1.07
PHGDH-225ENST00000641720 CASP10Q92851 521 aa8.34□□□□□ -1.07
PHGDH-225ENST00000641720 NECTIN4Q96NY8 510 aa8.34□□□□□ -1.07
PHGDH-225ENST00000641720 ADAM2Q99965 735 aa8.34□□□□□ -1.07
PHGDH-225ENST00000641720 TCF25Q9BQ70 676 aa8.34□□□□□ -1.07
PHGDH-225ENST00000641720 ZBP1Q9H171 429 aa8.34□□□□□ -1.07
PHGDH-225ENST00000641720 SMARCAD1Q9H4L7 1026 aa8.34□□□□□ -1.07
PHGDH-225ENST00000641720 ELAC1Q9H777 363 aaKnown RBP8.34□□□□□ -1.07
PHGDH-225ENST00000641720 BRMS1Q9HCU9 246 aa8.34□□□□□ -1.07
PHGDH-225ENST00000641720 TMEM161AQ9NX61 479 aa8.34□□□□□ -1.07
PHGDH-225ENST00000641720 PKD2L1Q9P0L9 805 aa8.34□□□□□ -1.07
PHGDH-225ENST00000641720 DUSP12Q9UNI6 340 aa8.34□□□□□ -1.07
PHGDH-225ENST00000641720 NR2E1Q9Y466 385 aa8.34□□□□□ -1.07
PHGDH-225ENST00000641720 PCDHB12Q9Y5F1 795 aa8.34□□□□□ -1.07
PHGDH-225ENST00000641720 IRAK3Q9Y616 596 aa8.34□□□□□ -1.07
PHGDH-225ENST00000641720 TICRRQ7Z2Z1 1910 aa8.34□□□□□ -1.07
PHGDH-225ENST00000641720 LOC400499M0QZD8 3231 aa8.34□□□□□ -1.07
PHGDH-225ENST00000641720 DSPP15924 2871 aaKnown RBP8.34□□□□□ -1.07
PHGDH-225ENST00000641720 DMXL2Q8TDJ6 3036 aa8.34□□□□□ -1.07
PHGDH-225ENST00000641720 KIF26AQ9ULI4 1882 aaPredicted RBP8.34□□□□□ -1.07
PHGDH-225ENST00000641720 RRN3P2A6NIE6 340 aa8.33□□□□□ -1.08
PHGDH-225ENST00000641720 H3BQV1 296 aa8.33□□□□□ -1.08
PHGDH-225ENST00000641720 NARSO43776 548 aaKnown RBP8.33□□□□□ -1.08
PHGDH-225ENST00000641720 SLC37A4O43826 429 aa8.33□□□□□ -1.08
PHGDH-225ENST00000641720 GPR32O75388 356 aa8.33□□□□□ -1.08
PHGDH-225ENST00000641720 RPLP2P05387 115 aaKnown RBP8.33□□□□□ -1.08
PHGDH-225ENST00000641720 HSP90AA1P07900 732 aaKnown RBP8.33□□□□□ -1.08
PHGDH-225ENST00000641720 CYP3A4P08684 503 aa8.33□□□□□ -1.08
PHGDH-225ENST00000641720 EPCAMP16422 314 aa8.33□□□□□ -1.08
PHGDH-225ENST00000641720 U2AF2P26368 475 aaKnown RBP eCLIP8.33□□□□□ -1.08
PHGDH-225ENST00000641720 IGBP1P78318 339 aa8.33□□□□□ -1.08
PHGDH-225ENST00000641720 ITGB3BPQ13352 177 aaPredicted RBP8.33□□□□□ -1.08
PHGDH-225ENST00000641720 PKP1Q13835 747 aa8.33□□□□□ -1.08
PHGDH-225ENST00000641720 BECN1Q14457 450 aa8.33□□□□□ -1.08
PHGDH-225ENST00000641720 NBR1Q14596 966 aa8.33□□□□□ -1.08
PHGDH-225ENST00000641720 SAFBQ15424 915 aaKnown RBP eCLIP8.33□□□□□ -1.08
PHGDH-225ENST00000641720 CEP55Q53EZ4 464 aa8.33□□□□□ -1.08
PHGDH-225ENST00000641720 MTHFD1LQ6UB35 978 aa8.33□□□□□ -1.08
PHGDH-225ENST00000641720 FAM43BQ6ZT52 329 aaPredicted RBP8.33□□□□□ -1.08
PHGDH-225ENST00000641720 SLC24A5Q71RS6 500 aa8.33□□□□□ -1.08
PHGDH-225ENST00000641720 NEK8Q86SG6 692 aa8.33□□□□□ -1.08
PHGDH-225ENST00000641720 FERMT3Q86UX7 667 aa8.33□□□□□ -1.08
PHGDH-225ENST00000641720 NOSTRINQ8IVI9 506 aa8.33□□□□□ -1.08
PHGDH-225ENST00000641720 THNSL1Q8IYQ7 743 aa8.33□□□□□ -1.08
PHGDH-225ENST00000641720 MBOAT7Q96N66 472 aa8.33□□□□□ -1.08
PHGDH-225ENST00000641720 MXRA8Q9BRK3 442 aa8.33□□□□□ -1.08
PHGDH-225ENST00000641720 TMEM117Q9H0C3 514 aa8.33□□□□□ -1.08
PHGDH-225ENST00000641720 FOXP1Q9H334 677 aaPredicted RBP8.33□□□□□ -1.08
PHGDH-225ENST00000641720 NGRNQ9NPE2 291 aaKnown RBP8.33□□□□□ -1.08
PHGDH-225ENST00000641720 JADE2Q9NQC1 790 aa8.33□□□□□ -1.08
PHGDH-225ENST00000641720 C1orf112Q9NSG2 853 aa8.33□□□□□ -1.08
PHGDH-225ENST00000641720 LIMD1Q9UGP4 676 aa8.33□□□□□ -1.08
PHGDH-225ENST00000641720 ST3GAL5Q9UNP4 418 aa8.33□□□□□ -1.08
PHGDH-225ENST00000641720 MTMR6Q9Y217 621 aa8.33□□□□□ -1.08
PHGDH-225ENST00000641720 ITPR1Q14643 2758 aa8.33□□□□□ -1.08
PHGDH-225ENST00000641720 NFASCO94856 1347 aa8.32□□□□□ -1.08
PHGDH-225ENST00000641720 SDK1Q7Z5N4 2213 aa8.32□□□□□ -1.08
PHGDH-225ENST00000641720 MEIS1O00470 390 aa8.32□□□□□ -1.08
PHGDH-225ENST00000641720 STX6O43752 255 aa8.32□□□□□ -1.08
PHGDH-225ENST00000641720 C22orf31O95567 290 aa8.32□□□□□ -1.08
PHGDH-225ENST00000641720 CCNE2O96020 404 aa8.32□□□□□ -1.08
PHGDH-225ENST00000641720 LMNAP02545 664 aaKnown RBP8.32□□□□□ -1.08
PHGDH-225ENST00000641720 GLULP15104 373 aa8.32□□□□□ -1.08
PHGDH-225ENST00000641720 PDCP20941 246 aa8.32□□□□□ -1.08
PHGDH-225ENST00000641720 TGM1P22735 817 aa8.32□□□□□ -1.08
PHGDH-225ENST00000641720 CIITAP33076 1130 aa8.32□□□□□ -1.08
PHGDH-225ENST00000641720 ANP32AP39687 249 aaKnown RBP8.32□□□□□ -1.08
PHGDH-225ENST00000641720 MTHFRP42898 656 aa8.32□□□□□ -1.08
PHGDH-225ENST00000641720 TOB1P50616 345 aaPredicted RBP8.32□□□□□ -1.08
PHGDH-225ENST00000641720 KRT76Q01546 638 aa8.32□□□□□ -1.08
PHGDH-225ENST00000641720 RESTQ13127 1097 aa8.32□□□□□ -1.08
PHGDH-225ENST00000641720 MTMR1Q13613 665 aa8.32□□□□□ -1.08
PHGDH-225ENST00000641720 PUM1Q14671 1186 aaKnown RBP eCLIP8.32□□□□□ -1.08
PHGDH-225ENST00000641720 LETM2Q2VYF4 491 aa8.32□□□□□ -1.08
PHGDH-225ENST00000641720 MCTP1Q6DN14 999 aa8.32□□□□□ -1.08
PHGDH-225ENST00000641720 PLPPR4Q7Z2D5 763 aa8.32□□□□□ -1.08
PHGDH-225ENST00000641720 DGLUCYQ7Z3D6 616 aa8.32□□□□□ -1.08
PHGDH-225ENST00000641720 NME8Q8N427 588 aa8.32□□□□□ -1.08
PHGDH-225ENST00000641720 DCLK2Q8N568 766 aa8.32□□□□□ -1.08
PHGDH-225ENST00000641720 TDRD5Q8NAT2 981 aaKnown RBP8.32□□□□□ -1.08
PHGDH-225ENST00000641720 GIMAP8Q8ND71 665 aaPredicted RBP8.32□□□□□ -1.08
PHGDH-225ENST00000641720 GJA10Q969M2 543 aa8.32□□□□□ -1.08
PHGDH-225ENST00000641720 KCNH7Q9NS40 1196 aa8.32□□□□□ -1.08
PHGDH-225ENST00000641720 RBM19Q9Y4C8 960 aaKnown RBP8.32□□□□□ -1.08
PHGDH-225ENST00000641720 R4GN57 208 aa8.32□□□□□ -1.08
PHGDH-225ENST00000641720 SETXQ7Z333 2677 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms