RNA–Protein interactions for RNA: ENST00000640657.1

HNRNPU-230, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-230ENST00000640657 TMEM259Q4ZIN3 620 aa5.37□□□□□ -1.55
HNRNPU-230ENST00000640657 PI16Q6UXB8 463 aa5.37□□□□□ -1.55
HNRNPU-230ENST00000640657 PODNQ7Z5L7 613 aa5.37□□□□□ -1.55
HNRNPU-230ENST00000640657 CRLF3Q8IUI8 442 aa5.37□□□□□ -1.55
HNRNPU-230ENST00000640657 SRBD1Q8N5C6 995 aaKnown RBP5.37□□□□□ -1.55
HNRNPU-230ENST00000640657 ICA1LQ8NDH6 482 aa5.37□□□□□ -1.55
HNRNPU-230ENST00000640657 FAM81AQ8TBF8 368 aa5.37□□□□□ -1.55
HNRNPU-230ENST00000640657 RASGRP4Q8TDF6 673 aa5.37□□□□□ -1.55
HNRNPU-230ENST00000640657 RBM41Q96IZ5 413 aaKnown RBP5.37□□□□□ -1.55
HNRNPU-230ENST00000640657 DUSP9Q99956 384 aaKnown RBP5.37□□□□□ -1.55
HNRNPU-230ENST00000640657 MKNK1Q9BUB5 465 aa5.37□□□□□ -1.55
HNRNPU-230ENST00000640657 WWP1Q9H0M0 922 aa5.37□□□□□ -1.55
HNRNPU-230ENST00000640657 EPS15L1Q9UBC2 864 aa5.37□□□□□ -1.55
HNRNPU-230ENST00000640657 NAGPAQ9UK23 515 aa5.37□□□□□ -1.55
HNRNPU-230ENST00000640657 AFF2P51816 1311 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 CNTNAP5Q8WYK1 1306 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 ESYT2A0FGR8 921 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 NR3C1P04150 777 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 ACTN1P12814 892 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 HSPA13P48723 471 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 ARL4CP56559 192 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 SLC34A1Q06495 639 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 TBC1D9BQ66K14 1250 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 MIS18BP1Q6P0N0 1132 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 FAM47EQ6ZV65 393 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 DDX42Q86XP3 938 aaKnown RBP eCLIP5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 FAM178BQ8IXR5 827 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 TTC13Q8NBP0 860 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 ZFAND2BQ8WV99 257 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 MTMR8Q96EF0 704 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 CATSPER2Q96P56 530 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 TRIM51Q9BSJ1 452 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 EFHD1Q9BUP0 239 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 TRABDQ9H4I3 376 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 FAM217BQ9NTX9 383 aaPredicted RBP5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 TRAF3IP3Q9Y228 551 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 SIK3Q9Y2K2 1263 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 RTCBQ9Y3I0 505 aaKnown RBP5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 COMMD3-BMI1R4GMX3 469 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 UBE4BO95155 1302 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 GTPBP10A4D1E9 387 aaKnown RBP5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 YY1P25490 414 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 COILP38432 576 aaPredicted RBP5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 NSFP46459 744 aaKnown RBP5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 KLK7P49862 253 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 PEX5P50542 639 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 CACNA2D1P54289 1103 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 ARHGAP4P98171 946 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 PTK2Q05397 1052 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 TMED1Q13445 227 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 LRRC14Q15048 493 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 FSCBQ5H9T9 825 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 KLC3Q6P597 504 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 KIF2BQ8N4N8 673 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 SLC35G2Q8TBE7 412 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 CKAP2Q8WWK9 683 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 RMDN2Q96LZ7 410 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 LRGUKQ96M69 825 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 NT5C1BQ96P26 610 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 TMEM237Q96Q45 408 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 TSPYL2Q9H2G4 693 aaPredicted RBP5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 SCINQ9Y6U3 715 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 ZHX2Q9Y6X8 837 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 P4HA2O15460 535 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 TJP3O95049 919 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 UNC5CO95185 931 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 PLEKP08567 350 aaPredicted RBP5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 HSPA1LP34931 641 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 GJC1P36383 396 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 IL6STP40189 918 aaPredicted RBP5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 YWHAEP62258 255 aaKnown RBP5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 CHRNDQ07001 517 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 SCARF1Q14162 830 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 TEDDM1Q5T9Z0 273 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 C1orf146Q5VVC0 180 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 APTXQ7Z2E3 356 aaKnown RBP5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 RASSF3Q86WH2 238 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 WDR75Q8IWA0 830 aaKnown RBP5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 MAP7D3Q8IWC1 876 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 DNAJC10Q8IXB1 793 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 KLHL23Q8NBE8 558 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 ABTB1Q969K4 478 aaPredicted RBP5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 PPP2R3CQ969Q6 453 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 ITFG2Q969R8 447 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 INPP4AQ96PE3 977 aaPredicted RBP5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 ACCSQ96QU6 501 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 AGPAT1Q99943 283 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 GORASP1Q9BQQ3 440 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 OSBPL8Q9BZF1 889 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 CCDC134Q9H6E4 229 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 TBK1Q9UHD2 729 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 MID2Q9UJV3 735 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 TMCO1Q9UM00 188 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 STARD13Q9Y3M8 1113 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 AGLP35573 1532 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 DIP2CQ9Y2E4 1556 aa5.36□□□□□ -1.55
HNRNPU-230ENST00000640657 TCHHQ07283 1943 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms