RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 SYN1P17600 705 aa23.78■■□□□ 1.4
TSPAN9-208ENST00000640568 SFPQP23246 707 aaKnown RBP eCLIP23.78■■□□□ 1.4
TSPAN9-208ENST00000640568 NCKAP1LP55160 1127 aa23.78■■□□□ 1.4
TSPAN9-208ENST00000640568 SKOR2Q2VWA4 1001 aaPredicted RBP23.78■■□□□ 1.4
TSPAN9-208ENST00000640568 FBXO47Q5MNV8 452 aa23.78■■□□□ 1.4
TSPAN9-208ENST00000640568 CDCA2Q69YH5 1023 aaPredicted RBP23.78■■□□□ 1.4
TSPAN9-208ENST00000640568 TRAF7Q6Q0C0 670 aa23.78■■□□□ 1.4
TSPAN9-208ENST00000640568 USP38Q8NB14 1042 aa23.78■■□□□ 1.4
TSPAN9-208ENST00000640568 OLFML3Q9NRN5 406 aa23.78■■□□□ 1.4
TSPAN9-208ENST00000640568 GCNT3O95395 438 aa23.77■■□□□ 1.4
TSPAN9-208ENST00000640568 MAPTP10636 758 aaKnown RBP23.77■■□□□ 1.4
TSPAN9-208ENST00000640568 ABCD1P33897 745 aa23.77■■□□□ 1.4
TSPAN9-208ENST00000640568 RFC2P35250 354 aa23.77■■□□□ 1.4
TSPAN9-208ENST00000640568 EFNA5P52803 228 aa23.77■■□□□ 1.4
TSPAN9-208ENST00000640568 KLHL40Q2TBA0 621 aa23.77■■□□□ 1.4
TSPAN9-208ENST00000640568 FAM26FQ5R3K3 315 aa23.77■■□□□ 1.4
TSPAN9-208ENST00000640568 MFSD5Q6N075 450 aa23.77■■□□□ 1.4
TSPAN9-208ENST00000640568 TSHZ1Q6ZSZ6 1077 aa23.77■■□□□ 1.4
TSPAN9-208ENST00000640568 STXBP4Q6ZWJ1 553 aa23.77■■□□□ 1.4
TSPAN9-208ENST00000640568 IFNLR1Q8IU57 520 aaPredicted RBP23.77■■□□□ 1.4
TSPAN9-208ENST00000640568 GSDMAQ96QA5 445 aa23.77■■□□□ 1.4
TSPAN9-208ENST00000640568 NTPCRQ9BSD7 190 aaKnown RBP23.77■■□□□ 1.4
TSPAN9-208ENST00000640568 PCDHA5Q9Y5H7 936 aa23.77■■□□□ 1.4
TSPAN9-208ENST00000640568 SQORQ9Y6N5 450 aa23.77■■□□□ 1.4
TSPAN9-208ENST00000640568 ADGRA3Q8IWK6 1321 aa23.76■■□□□ 1.39
TSPAN9-208ENST00000640568 K7ERI5 159 aa23.76■■□□□ 1.39
TSPAN9-208ENST00000640568 ERLIN2O94905 339 aa23.76■■□□□ 1.39
TSPAN9-208ENST00000640568 NMT1P30419 496 aaKnown RBP23.76■■□□□ 1.39
TSPAN9-208ENST00000640568 PAK2Q13177 524 aa23.76■■□□□ 1.39
TSPAN9-208ENST00000640568 KCNB1Q14721 858 aa23.76■■□□□ 1.39
TSPAN9-208ENST00000640568 MAPK6Q16659 721 aa23.76■■□□□ 1.39
TSPAN9-208ENST00000640568 CCDC183Q5T5S1 534 aa23.76■■□□□ 1.39
TSPAN9-208ENST00000640568 TMEM40Q8WWA1 233 aa23.76■■□□□ 1.39
TSPAN9-208ENST00000640568 ARHGAP28Q9P2N2 729 aa23.76■■□□□ 1.39
TSPAN9-208ENST00000640568 DENND3A2RUS2 1198 aa23.75■■□□□ 1.39
TSPAN9-208ENST00000640568 GPR182O15218 404 aa23.75■■□□□ 1.39
TSPAN9-208ENST00000640568 CSDE1O75534 798 aaKnown RBP23.75■■□□□ 1.39
TSPAN9-208ENST00000640568 SCP2P22307 547 aa23.75■■□□□ 1.39
TSPAN9-208ENST00000640568 ITGB8P26012 769 aa23.75■■□□□ 1.39
TSPAN9-208ENST00000640568 NFX1Q12986 1120 aaKnown RBP23.75■■□□□ 1.39
TSPAN9-208ENST00000640568 STRN3Q13033 797 aa23.75■■□□□ 1.39
TSPAN9-208ENST00000640568 PSMD2Q13200 908 aa23.75■■□□□ 1.39
TSPAN9-208ENST00000640568 LPIN1Q14693 890 aa23.75■■□□□ 1.39
TSPAN9-208ENST00000640568 CATSPER4Q7RTX7 472 aa23.75■■□□□ 1.39
TSPAN9-208ENST00000640568 HAUS6Q7Z4H7 955 aa23.75■■□□□ 1.39
TSPAN9-208ENST00000640568 TMEM161BQ8NDZ6 487 aa23.75■■□□□ 1.39
TSPAN9-208ENST00000640568 LBHD1Q9BQE6 289 aaPredicted RBP23.75■■□□□ 1.39
TSPAN9-208ENST00000640568 TMEM134Q9H6X4 195 aa23.75■■□□□ 1.39
TSPAN9-208ENST00000640568 PRMT7Q9NVM4 692 aaPredicted RBP23.75■■□□□ 1.39
TSPAN9-208ENST00000640568 NOC2LQ9Y3T9 749 aaKnown RBP23.75■■□□□ 1.39
TSPAN9-208ENST00000640568 RHOBTB3O94955 611 aa23.75■■□□□ 1.39
TSPAN9-208ENST00000640568 PRKCBP05771 671 aa23.75■■□□□ 1.39
TSPAN9-208ENST00000640568 RGS19P49795 217 aa23.75■■□□□ 1.39
TSPAN9-208ENST00000640568 MBTD1Q05BQ5 628 aa23.75■■□□□ 1.39
TSPAN9-208ENST00000640568 NCBP1Q09161 790 aaKnown RBP23.75■■□□□ 1.39
TSPAN9-208ENST00000640568 ALCAMQ13740 583 aa23.75■■□□□ 1.39
TSPAN9-208ENST00000640568 PCBP1Q15365 356 aaKnown RBP eCLIP23.75■■□□□ 1.39
TSPAN9-208ENST00000640568 TMEM132AQ24JP5 1023 aa23.75■■□□□ 1.39
TSPAN9-208ENST00000640568 CAVIN1Q6NZI2 390 aaKnown RBP23.75■■□□□ 1.39
TSPAN9-208ENST00000640568 DEFB128Q7Z7B8 93 aa23.75■■□□□ 1.39
TSPAN9-208ENST00000640568 FAM228AQ86W67 206 aa23.75■■□□□ 1.39
TSPAN9-208ENST00000640568 BADQ92934 168 aa23.75■■□□□ 1.39
TSPAN9-208ENST00000640568 HPS3Q969F9 1004 aa23.75■■□□□ 1.39
TSPAN9-208ENST00000640568 SLC39A2Q9NP94 309 aa23.75■■□□□ 1.39
TSPAN9-208ENST00000640568 KIAA1468Q9P260 1216 aa23.75■■□□□ 1.39
TSPAN9-208ENST00000640568 PCDHB13Q9Y5F0 798 aa23.75■■□□□ 1.39
TSPAN9-208ENST00000640568 NBNO60934 754 aa23.74■■□□□ 1.39
TSPAN9-208ENST00000640568 FGFR4P22455 802 aa23.74■■□□□ 1.39
TSPAN9-208ENST00000640568 CD52P31358 61 aa23.74■■□□□ 1.39
TSPAN9-208ENST00000640568 EHHADHQ08426 723 aa23.74■■□□□ 1.39
TSPAN9-208ENST00000640568 MBTPS1Q14703 1052 aa23.74■■□□□ 1.39
TSPAN9-208ENST00000640568 ZNF720Q7Z2F6 126 aa23.74■■□□□ 1.39
TSPAN9-208ENST00000640568 RPUSD2Q8IZ73 545 aaKnown RBP23.74■■□□□ 1.39
TSPAN9-208ENST00000640568 FIZ1Q96SL8 496 aa23.74■■□□□ 1.39
TSPAN9-208ENST00000640568 IFIH1Q9BYX4 1025 aaKnown RBP23.74■■□□□ 1.39
TSPAN9-208ENST00000640568 MINDY3Q9H8M7 445 aa23.74■■□□□ 1.39
TSPAN9-208ENST00000640568 CSF2RAP15509 400 aa23.73■■□□□ 1.39
TSPAN9-208ENST00000640568 PPIGQ13427 754 aaKnown RBP eCLIP23.73■■□□□ 1.39
TSPAN9-208ENST00000640568 TET1Q8NFU7 2136 aa23.73■■□□□ 1.39
TSPAN9-208ENST00000640568 SPATA20Q8TB22 786 aa23.73■■□□□ 1.39
TSPAN9-208ENST00000640568 HVCN1Q96D96 273 aa23.73■■□□□ 1.39
TSPAN9-208ENST00000640568 PRIMPOLQ96LW4 560 aa23.73■■□□□ 1.39
TSPAN9-208ENST00000640568 ST6GALNAC4Q9H4F1 302 aa23.73■■□□□ 1.39
TSPAN9-208ENST00000640568 PADI3Q9ULW8 664 aa23.73■■□□□ 1.39
TSPAN9-208ENST00000640568 ST3GAL5Q9UNP4 418 aa23.73■■□□□ 1.39
TSPAN9-208ENST00000640568 MYBP10242 640 aa23.72■■□□□ 1.39
TSPAN9-208ENST00000640568 GTF2BQ00403 316 aa23.72■■□□□ 1.39
TSPAN9-208ENST00000640568 FPGSQ05932 587 aa23.72■■□□□ 1.39
TSPAN9-208ENST00000640568 NT5DC1Q5TFE4 455 aa23.72■■□□□ 1.39
TSPAN9-208ENST00000640568 SEPT8Q92599 483 aa23.72■■□□□ 1.39
TSPAN9-208ENST00000640568 BICD1Q96G01 975 aa23.72■■□□□ 1.39
TSPAN9-208ENST00000640568 GTPBP4Q9BZE4 634 aaKnown RBP23.72■■□□□ 1.39
TSPAN9-208ENST00000640568 CCDC113Q9H0I3 377 aa23.72■■□□□ 1.39
TSPAN9-208ENST00000640568 AGO3Q9H9G7 860 aaKnown RBP23.72■■□□□ 1.39
TSPAN9-208ENST00000640568 TMEM63CQ9P1W3 806 aa23.72■■□□□ 1.39
TSPAN9-208ENST00000640568 MAN1B1Q9UKM7 699 aa23.72■■□□□ 1.39
TSPAN9-208ENST00000640568 PFKMP08237 780 aa23.71■■□□□ 1.39
TSPAN9-208ENST00000640568 SARSP49591 514 aaKnown RBP23.71■■□□□ 1.39
TSPAN9-208ENST00000640568 PRPF4BQ13523 1007 aaKnown RBP23.71■■□□□ 1.39
TSPAN9-208ENST00000640568 FAM187BQ17R55 369 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms