RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 PLCB3Q01970 1234 aa28.07■■■□□ 2.08
VEGFA-230ENST00000640482 PDE12Q6L8Q7 609 aaKnown RBP28.07■■■□□ 2.08
VEGFA-230ENST00000640482 KCNT2Q6UVM3 1135 aa28.07■■■□□ 2.08
VEGFA-230ENST00000640482 MICAL1Q8TDZ2 1067 aa28.07■■■□□ 2.08
VEGFA-230ENST00000640482 PIGOQ8TEQ8 1089 aa28.07■■■□□ 2.08
VEGFA-230ENST00000640482 PUF60Q9UHX1 559 aaKnown RBP28.07■■■□□ 2.08
VEGFA-230ENST00000640482 LZTS1Q9Y250 596 aa28.07■■■□□ 2.08
VEGFA-230ENST00000640482 TTC28Q96AY4 2481 aa28.07■■■□□ 2.08
VEGFA-230ENST00000640482 TFDP1Q14186 410 aa28.06■■■□□ 2.08
VEGFA-230ENST00000640482 PCBP1Q15365 356 aaKnown RBP eCLIP28.06■■■□□ 2.084e-7■■□□□ 11.7
VEGFA-230ENST00000640482 MINDY3Q9H8M7 445 aa28.06■■■□□ 2.08
VEGFA-230ENST00000640482 ZNF623O75123 536 aa28.05■■■□□ 2.08
VEGFA-230ENST00000640482 SPATA31C1P0DKV0 1188 aa28.05■■■□□ 2.08
VEGFA-230ENST00000640482 U2AF2P26368 475 aaKnown RBP eCLIP28.05■■■□□ 2.082e-48■□□□□ 11.2
VEGFA-230ENST00000640482 GTF2F1P35269 517 aaKnown RBP eCLIP28.05■■■□□ 2.083e-11■■■■■ 42.3
VEGFA-230ENST00000640482 LTBRP36941 435 aa28.05■■■□□ 2.08
VEGFA-230ENST00000640482 GLB1LQ6UWU2 654 aa28.05■■■□□ 2.08
VEGFA-230ENST00000640482 ADGRD2Q7Z7M1 963 aa28.05■■■□□ 2.08
VEGFA-230ENST00000640482 MRPS27Q92552 414 aaKnown RBP28.05■■■□□ 2.08
VEGFA-230ENST00000640482 PGBD4Q96DM1 585 aa28.05■■■□□ 2.08
VEGFA-230ENST00000640482 POLR3CQ9BUI4 534 aaPredicted RBP28.05■■■□□ 2.08
VEGFA-230ENST00000640482 PLXNA4Q9HCM2 1894 aa28.05■■■□□ 2.08
VEGFA-230ENST00000640482 ERLIN2O94905 339 aa28.04■■■□□ 2.08
VEGFA-230ENST00000640482 IL9P15248 144 aa28.04■■■□□ 2.08
VEGFA-230ENST00000640482 NRIP1P48552 1158 aa28.04■■■□□ 2.08
VEGFA-230ENST00000640482 KRT17Q04695 432 aa28.04■■■□□ 2.08
VEGFA-230ENST00000640482 POU5F1BQ06416 359 aa28.04■■■□□ 2.08
VEGFA-230ENST00000640482 ADAM15Q13444 863 aa28.04■■■□□ 2.08
VEGFA-230ENST00000640482 CATSPER3Q86XQ3 398 aa28.04■■■□□ 2.08
VEGFA-230ENST00000640482 SPG21Q9NZD8 308 aa28.04■■■□□ 2.08
VEGFA-230ENST00000640482 PCDHB2Q9Y5E7 798 aa28.04■■■□□ 2.08
VEGFA-230ENST00000640482 ARL2P36404 184 aa28.03■■■□□ 2.08
VEGFA-230ENST00000640482 NDUFV1P49821 464 aa28.03■■■□□ 2.08
VEGFA-230ENST00000640482 PTENP60484 403 aa28.03■■■□□ 2.08
VEGFA-230ENST00000640482 FAM178BQ8IXR5 827 aa28.03■■■□□ 2.08
VEGFA-230ENST00000640482 EFHBQ8N7U6 833 aa28.03■■■□□ 2.08
VEGFA-230ENST00000640482 LPPQ93052 612 aa28.03■■■□□ 2.08
VEGFA-230ENST00000640482 NACC1Q96RE7 527 aa28.03■■■□□ 2.08
VEGFA-230ENST00000640482 TLE6Q9H808 572 aa28.03■■■□□ 2.08
VEGFA-230ENST00000640482 DBR1Q9UK59 544 aaKnown RBP28.03■■■□□ 2.08
VEGFA-230ENST00000640482 FSD2A1L4K1 749 aa28.02■■■□□ 2.08
VEGFA-230ENST00000640482 CARNS1A5YM72 827 aa28.02■■■□□ 2.08
VEGFA-230ENST00000640482 LINC01565O15544 149 aa28.02■■■□□ 2.08
VEGFA-230ENST00000640482 USO1O60763 962 aaKnown RBP28.02■■■□□ 2.08
VEGFA-230ENST00000640482 MED24O75448 989 aa28.02■■■□□ 2.08
VEGFA-230ENST00000640482 RPA1P27694 616 aa28.02■■■□□ 2.08
VEGFA-230ENST00000640482 AXLP30530 894 aa28.02■■■□□ 2.08
VEGFA-230ENST00000640482 PBX3P40426 434 aa28.02■■■□□ 2.08
VEGFA-230ENST00000640482 MCM2P49736 904 aa28.02■■■□□ 2.08
VEGFA-230ENST00000640482 ERVFC1P60507 584 aa28.02■■■□□ 2.08
VEGFA-230ENST00000640482 DLX2Q07687 328 aaPredicted RBP28.02■■■□□ 2.08
VEGFA-230ENST00000640482 NCBP1Q09161 790 aaKnown RBP28.02■■■□□ 2.08
VEGFA-230ENST00000640482 LONRF3Q496Y0 759 aa28.02■■■□□ 2.08
VEGFA-230ENST00000640482 HAUS3Q68CZ6 603 aa28.02■■■□□ 2.08
VEGFA-230ENST00000640482 RBM23Q86U06 439 aaKnown RBP28.02■■■□□ 2.08
VEGFA-230ENST00000640482 IFNLR1Q8IU57 520 aaPredicted RBP28.02■■■□□ 2.08
VEGFA-230ENST00000640482 TMX3Q96JJ7 454 aa28.02■■■□□ 2.08
VEGFA-230ENST00000640482 PCDHGC5Q9Y5F6 944 aa28.02■■■□□ 2.08
VEGFA-230ENST00000640482 BRWD1Q9NSI6 2320 aa28.02■■■□□ 2.08
VEGFA-230ENST00000640482 A0A087WWV3 80 aa28.01■■■□□ 2.07
VEGFA-230ENST00000640482 FSCN2O14926 492 aa28.01■■■□□ 2.07
VEGFA-230ENST00000640482 TBX10O75333 385 aa28.01■■■□□ 2.07
VEGFA-230ENST00000640482 HOXA11P31270 313 aaPredicted RBP28.01■■■□□ 2.07
VEGFA-230ENST00000640482 ALDH7A1P49419 539 aaKnown RBP28.01■■■□□ 2.07
VEGFA-230ENST00000640482 NOMO2Q5JPE7 1267 aa28.01■■■□□ 2.07
VEGFA-230ENST00000640482 SLC39A11Q8N1S5 342 aa28.01■■■□□ 2.07
VEGFA-230ENST00000640482 MCPH1Q8NEM0 835 aa28.01■■■□□ 2.07
VEGFA-230ENST00000640482 ASAP3Q8TDY4 903 aa28.01■■■□□ 2.07
VEGFA-230ENST00000640482 CDCA3Q99618 268 aaPredicted RBP28.01■■■□□ 2.07
VEGFA-230ENST00000640482 POLR3FQ9H1D9 316 aaPredicted RBP28.01■■■□□ 2.07
VEGFA-230ENST00000640482 NGRNQ9NPE2 291 aaKnown RBP28.01■■■□□ 2.07
VEGFA-230ENST00000640482 ENTPD7Q9NQZ7 604 aa28.01■■■□□ 2.07
VEGFA-230ENST00000640482 INO80B-WBP1J3KQ70 363 aa28■■■□□ 2.07
VEGFA-230ENST00000640482 MUTP22033 750 aa28■■■□□ 2.07
VEGFA-230ENST00000640482 FXR2P51116 673 aaKnown RBP eCLIP28■■■□□ 2.076e-18■■■□□ 18.2
VEGFA-230ENST00000640482 BCAR1P56945 870 aa28■■■□□ 2.07
VEGFA-230ENST00000640482 CAPSQ13938 189 aa28■■■□□ 2.07
VEGFA-230ENST00000640482 NBR1Q14596 966 aa28■■■□□ 2.07
VEGFA-230ENST00000640482 CLUL1Q15846 466 aa28■■■□□ 2.07
VEGFA-230ENST00000640482 PLPP4Q5VZY2 271 aa28■■■□□ 2.07
VEGFA-230ENST00000640482 MRPL10Q7Z7H8 261 aaKnown RBP28■■■□□ 2.07
VEGFA-230ENST00000640482 CNNM3Q8NE01 707 aa28■■■□□ 2.07
VEGFA-230ENST00000640482 URGCPQ8TCY9 931 aa28■■■□□ 2.07
VEGFA-230ENST00000640482 CCDC51Q96ER9 411 aa28■■■□□ 2.07
VEGFA-230ENST00000640482 TCF25Q9BQ70 676 aa28■■■□□ 2.07
VEGFA-230ENST00000640482 NFKBIZQ9BYH8 718 aa28■■■□□ 2.07
VEGFA-230ENST00000640482 CD207Q9UJ71 328 aa28■■■□□ 2.07
VEGFA-230ENST00000640482 INPP5FQ9Y2H2 1132 aa28■■■□□ 2.07
VEGFA-230ENST00000640482 MYO7AQ13402 2215 aa27.99■■■□□ 2.07
VEGFA-230ENST00000640482 CNTNAP2Q9UHC6 1331 aa27.99■■■□□ 2.07
VEGFA-230ENST00000640482 MEIS3P2A8K0S8 358 aa27.99■■■□□ 2.07
VEGFA-230ENST00000640482 TSPAN1O60635 241 aa27.99■■■□□ 2.07
VEGFA-230ENST00000640482 OFD1O75665 1012 aa27.99■■■□□ 2.07
VEGFA-230ENST00000640482 GLRA2P23416 452 aa27.99■■■□□ 2.07
VEGFA-230ENST00000640482 RNASELQ05823 741 aaKnown RBP27.99■■■□□ 2.07
VEGFA-230ENST00000640482 SMAD4Q13485 552 aaKnown RBP27.99■■■□□ 2.07
VEGFA-230ENST00000640482 NOTUMQ6P988 496 aa27.99■■■□□ 2.07
VEGFA-230ENST00000640482 POTEGQ6S5H5 508 aa27.99■■■□□ 2.07
VEGFA-230ENST00000640482 C4orf32Q8N8J7 132 aa27.99■■■□□ 2.07
VEGFA-230ENST00000640482 TBC1D32Q96NH3 1257 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms