RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 TRIM14Q14142 442 aa6.14□□□□□ -1.43
RTTN-218ENST00000640408 FSCN1Q16658 493 aaKnown RBP6.14□□□□□ -1.43
RTTN-218ENST00000640408 KYAT1Q16773 422 aa6.14□□□□□ -1.43
RTTN-218ENST00000640408 CNNM4Q6P4Q7 775 aa6.14□□□□□ -1.43
RTTN-218ENST00000640408 TLK2Q86UE8 772 aa6.14□□□□□ -1.43
RTTN-218ENST00000640408 RASGRP4Q8TDF6 673 aa6.14□□□□□ -1.43
RTTN-218ENST00000640408 IFT81Q8WYA0 676 aa6.14□□□□□ -1.43
RTTN-218ENST00000640408 ARHGEF2Q92974 986 aaKnown RBP6.14□□□□□ -1.43
RTTN-218ENST00000640408 TMEM63CQ9P1W3 806 aa6.14□□□□□ -1.43
RTTN-218ENST00000640408 DDX20Q9UHI6 824 aaKnown RBP6.14□□□□□ -1.43
RTTN-218ENST00000640408 KCNH3Q9ULD8 1083 aa6.14□□□□□ -1.43
RTTN-218ENST00000640408 STK38LQ9Y2H1 464 aa6.14□□□□□ -1.43
RTTN-218ENST00000640408 FAM169AQ9Y6X4 670 aa6.14□□□□□ -1.43
RTTN-218ENST00000640408 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.14□□□□□ -1.43
RTTN-218ENST00000640408 EFCAB14O75071 495 aa6.13□□□□□ -1.43
RTTN-218ENST00000640408 EFNA5P52803 228 aa6.13□□□□□ -1.43
RTTN-218ENST00000640408 TRPC3Q13507 836 aa6.13□□□□□ -1.43
RTTN-218ENST00000640408 DLK2Q6UY11 383 aa6.13□□□□□ -1.43
RTTN-218ENST00000640408 PPP1R21Q6ZMI0 780 aa6.13□□□□□ -1.43
RTTN-218ENST00000640408 LRRC8AQ8IWT6 810 aa6.13□□□□□ -1.43
RTTN-218ENST00000640408 UBLCP1Q8WVY7 318 aaPredicted RBP6.13□□□□□ -1.43
RTTN-218ENST00000640408 RSPH1Q8WYR4 309 aa6.13□□□□□ -1.43
RTTN-218ENST00000640408 LZICQ8WZA0 190 aa6.13□□□□□ -1.43
RTTN-218ENST00000640408 BICD1Q96G01 975 aa6.13□□□□□ -1.43
RTTN-218ENST00000640408 FGD4Q96M96 766 aa6.13□□□□□ -1.43
RTTN-218ENST00000640408 POLR3CQ9BUI4 534 aaPredicted RBP6.13□□□□□ -1.43
RTTN-218ENST00000640408 MIS12Q9H081 205 aa6.13□□□□□ -1.43
RTTN-218ENST00000640408 CYP3A7-CYP3A51PA0A087WV96 503 aa6.13□□□□□ -1.43
RTTN-218ENST00000640408 BIN1O00499 593 aa6.13□□□□□ -1.43
RTTN-218ENST00000640408 FARP2O94887 1054 aaPredicted RBP6.13□□□□□ -1.43
RTTN-218ENST00000640408 INHAP05111 366 aa6.13□□□□□ -1.43
RTTN-218ENST00000640408 HNRNPCP07910 306 aaKnown RBP eCLIP6.13□□□□□ -1.43
RTTN-218ENST00000640408 SLFN14P0C7P3 912 aa6.13□□□□□ -1.43
RTTN-218ENST00000640408 CYP3A7P24462 503 aa6.13□□□□□ -1.43
RTTN-218ENST00000640408 MARCKSP29966 332 aaPredicted RBP6.13□□□□□ -1.43
RTTN-218ENST00000640408 PHKA2P46019 1235 aa6.13□□□□□ -1.43
RTTN-218ENST00000640408 PCYT1AP49585 367 aa6.13□□□□□ -1.43
RTTN-218ENST00000640408 LBX1P52954 281 aa6.13□□□□□ -1.43
RTTN-218ENST00000640408 ATP2C1P98194 919 aaPredicted RBP6.13□□□□□ -1.43
RTTN-218ENST00000640408 PRKCZQ05513 592 aa6.13□□□□□ -1.43
RTTN-218ENST00000640408 KIF5AQ12840 1032 aa6.13□□□□□ -1.43
RTTN-218ENST00000640408 MXD4Q14582 209 aaPredicted RBP6.13□□□□□ -1.43
RTTN-218ENST00000640408 PCBP1Q15365 356 aaKnown RBP eCLIP6.13□□□□□ -1.43
RTTN-218ENST00000640408 C8orf74Q6P047 294 aa6.13□□□□□ -1.43
RTTN-218ENST00000640408 ADAM21Q9UKJ8 722 aa6.13□□□□□ -1.43
RTTN-218ENST00000640408 SPATA31C2B4DYI2 1134 aa6.13□□□□□ -1.43
RTTN-218ENST00000640408 KIF28PB7ZC32 967 aa6.13□□□□□ -1.43
RTTN-218ENST00000640408 FXR2P51116 673 aaKnown RBP eCLIP6.13□□□□□ -1.43
RTTN-218ENST00000640408 MAP3K7CLP57077 242 aa6.13□□□□□ -1.43
RTTN-218ENST00000640408 ETF1P62495 437 aaKnown RBP6.13□□□□□ -1.43
RTTN-218ENST00000640408 CNTN2Q02246 1040 aa6.13□□□□□ -1.43
RTTN-218ENST00000640408 DNM1Q05193 864 aaKnown RBP6.13□□□□□ -1.43
RTTN-218ENST00000640408 IFT88Q13099 833 aa6.13□□□□□ -1.43
RTTN-218ENST00000640408 LAMB3Q13751 1172 aa6.13□□□□□ -1.43
RTTN-218ENST00000640408 PKN1Q16512 942 aa6.13□□□□□ -1.43
RTTN-218ENST00000640408 SUGP1Q8IWZ8 645 aaKnown RBP6.13□□□□□ -1.43
RTTN-218ENST00000640408 BICDL2A1A5D9 508 aa6.13□□□□□ -1.43
RTTN-218ENST00000640408 H3BRB1 525 aa6.13□□□□□ -1.43
RTTN-218ENST00000640408 LARGE1O95461 756 aa6.13□□□□□ -1.43
RTTN-218ENST00000640408 SLURP2P0DP57 97 aa6.13□□□□□ -1.43
RTTN-218ENST00000640408 TECP42680 631 aa6.13□□□□□ -1.43
RTTN-218ENST00000640408 RESTQ13127 1097 aa6.13□□□□□ -1.43
RTTN-218ENST00000640408 SLC30A10Q6XR72 485 aa6.13□□□□□ -1.43
RTTN-218ENST00000640408 ST13P4Q8IZP2 240 aaPredicted RBP6.13□□□□□ -1.43
RTTN-218ENST00000640408 CCDC197Q8NCU1 140 aa6.13□□□□□ -1.43
RTTN-218ENST00000640408 LEO1Q8WVC0 666 aaPredicted RBP6.13□□□□□ -1.43
RTTN-218ENST00000640408 GCOM2Q9BZD3 368 aaPredicted RBP6.13□□□□□ -1.43
RTTN-218ENST00000640408 TUT1Q9H6E5 874 aaKnown RBP6.13□□□□□ -1.43
RTTN-218ENST00000640408 MTRF1LQ9UGC7 380 aaKnown RBP6.13□□□□□ -1.43
RTTN-218ENST00000640408 SEPT9Q9UHD8 586 aaPredicted RBP6.13□□□□□ -1.43
RTTN-218ENST00000640408 PTPN22Q9Y2R2 807 aa6.13□□□□□ -1.43
RTTN-218ENST00000640408 COL4A5P29400 1685 aa6.13□□□□□ -1.43
RTTN-218ENST00000640408 KIAA0391O15091 583 aaKnown RBP6.12□□□□□ -1.43
RTTN-218ENST00000640408 EVI5O60447 810 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 LMNAP02545 664 aaKnown RBP6.12□□□□□ -1.43
RTTN-218ENST00000640408 RPA1P27694 616 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 DMP1Q13316 513 aaPredicted RBP6.12□□□□□ -1.43
RTTN-218ENST00000640408 Q3C1V9 767 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 ZNF792Q3KQV3 632 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.12□□□□□ -1.43
RTTN-218ENST00000640408 MAP3K21Q5TCX8 1036 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 NAIF1Q69YI7 327 aaPredicted RBP6.12□□□□□ -1.43
RTTN-218ENST00000640408 SND1Q7KZF4 910 aaKnown RBP eCLIP6.12□□□□□ -1.43
RTTN-218ENST00000640408 TNS4Q8IZW8 715 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 KLHL23Q8NBE8 558 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 ATP8B4Q8TF62 1192 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 OLFM3Q96PB7 478 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 PTPN18Q99952 460 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 ATP6V0A4Q9HBG4 840 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 KLC4Q9NSK0 619 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 MYH1P12882 1939 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 MEIS2O14770 477 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 TPD52L2O43399 206 aaKnown RBP6.12□□□□□ -1.43
RTTN-218ENST00000640408 KRT13P13646 458 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 JAG1P78504 1218 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 CCDC62Q6P9F0 684 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 ELMSAN1Q6PJG2 1045 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 CYFIP1Q7L576 1253 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 PLPPR4Q7Z2D5 763 aa6.12□□□□□ -1.43
RTTN-218ENST00000640408 METTL13Q8N6R0 699 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms