RNA–Protein interactions for RNA: ENST00000639034.1

PAX6-249, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-249ENST00000639034 CCDC39Q9UFE4 941 aa13.51□□□□□ -0.25
PAX6-249ENST00000639034 DNM3Q9UQ16 869 aa13.51□□□□□ -0.25
PAX6-249ENST00000639034 CHD7Q9P2D1 2997 aa13.51□□□□□ -0.25
PAX6-249ENST00000639034 LINC01553A4QN01 128 aa13.5□□□□□ -0.25
PAX6-249ENST00000639034 MGEA5O60502 916 aa13.5□□□□□ -0.25
PAX6-249ENST00000639034 MCM4P33991 863 aa13.5□□□□□ -0.25
PAX6-249ENST00000639034 RAD51AP2Q09MP3 1159 aa13.5□□□□□ -0.25
PAX6-249ENST00000639034 PCBP1Q15365 356 aaKnown RBP eCLIP13.5□□□□□ -0.25
PAX6-249ENST00000639034 PADI6Q6TGC4 694 aa13.5□□□□□ -0.25
PAX6-249ENST00000639034 CATSPER4Q7RTX7 472 aa13.5□□□□□ -0.25
PAX6-249ENST00000639034 SRGAP1Q7Z6B7 1085 aa13.5□□□□□ -0.25
PAX6-249ENST00000639034 RNF149Q8NC42 400 aa13.5□□□□□ -0.25
PAX6-249ENST00000639034 MYLIPQ8WY64 445 aa13.5□□□□□ -0.25
PAX6-249ENST00000639034 TGS1Q96RS0 853 aaKnown RBP13.5□□□□□ -0.25
PAX6-249ENST00000639034 POLR3FQ9H1D9 316 aaPredicted RBP13.5□□□□□ -0.25
PAX6-249ENST00000639034 BHMT2Q9H2M3 363 aa13.5□□□□□ -0.25
PAX6-249ENST00000639034 PRDM12Q9H4Q4 367 aa13.5□□□□□ -0.25
PAX6-249ENST00000639034 IFT122Q9HBG6 1241 aa13.5□□□□□ -0.25
PAX6-249ENST00000639034 CHST12Q9NRB3 414 aa13.5□□□□□ -0.25
PAX6-249ENST00000639034 SERTAD1Q9UHV2 236 aa13.5□□□□□ -0.25
PAX6-249ENST00000639034 KCNH3Q9ULD8 1083 aa13.5□□□□□ -0.25
PAX6-249ENST00000639034 PCDHB7Q9Y5E2 793 aa13.5□□□□□ -0.25
PAX6-249ENST00000639034 ADGRA3Q8IWK6 1321 aa13.5□□□□□ -0.25
PAX6-249ENST00000639034 SLC26A4O43511 780 aa13.49□□□□□ -0.25
PAX6-249ENST00000639034 CSDE1O75534 798 aaKnown RBP13.49□□□□□ -0.25
PAX6-249ENST00000639034 IBSPP21815 317 aaPredicted RBP13.49□□□□□ -0.25
PAX6-249ENST00000639034 CMA1P23946 247 aa13.49□□□□□ -0.25
PAX6-249ENST00000639034 STAT6P42226 847 aa13.49□□□□□ -0.25
PAX6-249ENST00000639034 MCM6Q14566 821 aa13.49□□□□□ -0.25
PAX6-249ENST00000639034 DSC3Q14574 896 aa13.49□□□□□ -0.25
PAX6-249ENST00000639034 CLEC17AQ6ZS10 378 aa13.49□□□□□ -0.25
PAX6-249ENST00000639034 GRAMD1CQ8IYS0 662 aa13.49□□□□□ -0.25
PAX6-249ENST00000639034 ARNTL2Q8WYA1 636 aa13.49□□□□□ -0.25
PAX6-249ENST00000639034 SAMD11Q96NU1 681 aa13.49□□□□□ -0.25
PAX6-249ENST00000639034 PIN4Q9Y237 131 aaKnown RBP13.49□□□□□ -0.25
PAX6-249ENST00000639034 TRANK1O15050 2925 aa13.49□□□□□ -0.25
PAX6-249ENST00000639034 C9IYK1 514 aa13.49□□□□□ -0.25
PAX6-249ENST00000639034 NR1I2O75469 434 aa13.49□□□□□ -0.25
PAX6-249ENST00000639034 DGKIO75912 1065 aa13.49□□□□□ -0.25
PAX6-249ENST00000639034 ERLIN2O94905 339 aa13.49□□□□□ -0.25
PAX6-249ENST00000639034 ARHGEF15O94989 841 aa13.49□□□□□ -0.25
PAX6-249ENST00000639034 EYA4O95677 639 aa13.49□□□□□ -0.25
PAX6-249ENST00000639034 CYP11B2P19099 503 aa13.49□□□□□ -0.25
PAX6-249ENST00000639034 FGFR4P22455 802 aa13.49□□□□□ -0.25
PAX6-249ENST00000639034 CASP1P29466 404 aa13.49□□□□□ -0.25
PAX6-249ENST00000639034 ARL2P36404 184 aa13.49□□□□□ -0.25
PAX6-249ENST00000639034 SYKP43405 635 aa13.49□□□□□ -0.25
PAX6-249ENST00000639034 AFMP43652 599 aa13.49□□□□□ -0.25
PAX6-249ENST00000639034 CACNB1Q02641 598 aaPredicted RBP13.49□□□□□ -0.25
PAX6-249ENST00000639034 POU5F1BQ06416 359 aa13.49□□□□□ -0.25
PAX6-249ENST00000639034 BTG3Q14201 252 aaPredicted RBP13.49□□□□□ -0.25
PAX6-249ENST00000639034 HYIQ5T013 277 aa13.49□□□□□ -0.25
PAX6-249ENST00000639034 FAM102BQ5T8I3 360 aa13.49□□□□□ -0.25
PAX6-249ENST00000639034 CCDC73Q6ZRK6 1079 aa13.49□□□□□ -0.25
PAX6-249ENST00000639034 FIBCD1Q8N539 461 aa13.49□□□□□ -0.25
PAX6-249ENST00000639034 TMEM87AQ8NBN3 555 aa13.49□□□□□ -0.25
PAX6-249ENST00000639034 CCSER1Q9C0I3 900 aa13.49□□□□□ -0.25
PAX6-249ENST00000639034 ELAC1Q9H777 363 aaKnown RBP13.49□□□□□ -0.25
PAX6-249ENST00000639034 CERS4Q9HA82 394 aa13.49□□□□□ -0.25
PAX6-249ENST00000639034 RC3H2Q9HBD1 1191 aaKnown RBP13.49□□□□□ -0.25
PAX6-249ENST00000639034 TMEM161AQ9NX61 479 aa13.49□□□□□ -0.25
PAX6-249ENST00000639034 MTUS1Q9ULD2 1270 aa13.49□□□□□ -0.25
PAX6-249ENST00000639034 RWDD3Q9Y3V2 267 aa13.49□□□□□ -0.25
PAX6-249ENST00000639034 NPHP3-ACAD11A0A0J9YXS1 232 aa13.48□□□□□ -0.25
PAX6-249ENST00000639034 A0A1W2PQ27 194 aa13.48□□□□□ -0.25
PAX6-249ENST00000639034 A0A1W2PQ64 194 aa13.48□□□□□ -0.25
PAX6-249ENST00000639034 A0A1W2PQD8 194 aa13.48□□□□□ -0.25
PAX6-249ENST00000639034 HOXA2O43364 376 aa13.48□□□□□ -0.25
PAX6-249ENST00000639034 PLA2G4BP0C869 781 aa13.48□□□□□ -0.25
PAX6-249ENST00000639034 PTENP60484 403 aa13.48□□□□□ -0.25
PAX6-249ENST00000639034 ERVK-21P61565 698 aa13.48□□□□□ -0.25
PAX6-249ENST00000639034 UBE2HP62256 183 aa13.48□□□□□ -0.25
PAX6-249ENST00000639034 NCBP1Q09161 790 aaKnown RBP13.48□□□□□ -0.25
PAX6-249ENST00000639034 CAPSQ13938 189 aa13.48□□□□□ -0.25
PAX6-249ENST00000639034 LONRF3Q496Y0 759 aa13.48□□□□□ -0.25
PAX6-249ENST00000639034 TMEM119Q4V9L6 283 aa13.48□□□□□ -0.25
PAX6-249ENST00000639034 TWF2Q6IBS0 349 aaKnown RBP13.48□□□□□ -0.25
PAX6-249ENST00000639034 CRIPAKQ8N1N5 446 aa13.48□□□□□ -0.25
PAX6-249ENST00000639034 ASAP3Q8TDY4 903 aa13.48□□□□□ -0.25
PAX6-249ENST00000639034 ZNF689Q96CS4 500 aaPredicted RBP13.48□□□□□ -0.25
PAX6-249ENST00000639034 NFKBIZQ9BYH8 718 aa13.48□□□□□ -0.25
PAX6-249ENST00000639034 AGPAT5Q9NUQ2 364 aa13.48□□□□□ -0.25
PAX6-249ENST00000639034 MORC2Q9Y6X9 1032 aaPredicted RBP13.48□□□□□ -0.25
PAX6-249ENST00000639034 RALGAPA2Q2PPJ7 1873 aa13.48□□□□□ -0.25
PAX6-249ENST00000639034 MYO9BQ13459 2157 aa13.47□□□□□ -0.25
PAX6-249ENST00000639034 COL6A3P12111 3177 aa13.47□□□□□ -0.25
PAX6-249ENST00000639034 LRRIQ4A6NIV6 560 aa13.47□□□□□ -0.25
PAX6-249ENST00000639034 INO80B-WBP1J3KQ70 363 aa13.47□□□□□ -0.25
PAX6-249ENST00000639034 ZNF202O95125 648 aa13.47□□□□□ -0.25
PAX6-249ENST00000639034 SKIP12755 728 aa13.47□□□□□ -0.25
PAX6-249ENST00000639034 GLRA2P23416 452 aa13.47□□□□□ -0.25
PAX6-249ENST00000639034 RAB27AP51159 221 aa13.47□□□□□ -0.25
PAX6-249ENST00000639034 FAM189BP81408 668 aa13.47□□□□□ -0.25
PAX6-249ENST00000639034 PPP2R5AQ15172 486 aa13.47□□□□□ -0.25
PAX6-249ENST00000639034 IFNLR1Q8IU57 520 aaPredicted RBP13.47□□□□□ -0.25
PAX6-249ENST00000639034 CMTR2Q8IYT2 770 aaKnown RBP13.47□□□□□ -0.25
PAX6-249ENST00000639034 KIFAP3Q92845 792 aa13.47□□□□□ -0.25
PAX6-249ENST00000639034 ERCC4Q92889 916 aaPredicted RBP13.47□□□□□ -0.25
PAX6-249ENST00000639034 GPRC5CQ9NQ84 441 aa13.47□□□□□ -0.25
PAX6-249ENST00000639034 BLOC1S4Q9NUP1 217 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms