RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 ITGB1P05556 798 aa5.31□□□□□ -1.56
CCDC7-211ENST00000638889 HNRNPLP14866 589 aaKnown RBP eCLIP5.31□□□□□ -1.56
CCDC7-211ENST00000638889 METTL24Q5JXM2 366 aa5.31□□□□□ -1.56
CCDC7-211ENST00000638889 LY6G5CQ5SRR4 150 aa5.31□□□□□ -1.56
CCDC7-211ENST00000638889 DPY19L2P1Q6NXN4 242 aa5.31□□□□□ -1.56
CCDC7-211ENST00000638889 ZZZ3Q8IYH5 903 aa5.31□□□□□ -1.56
CCDC7-211ENST00000638889 C7orf31Q8N865 590 aa5.31□□□□□ -1.56
CCDC7-211ENST00000638889 MB21D1Q8N884 522 aa5.31□□□□□ -1.56
CCDC7-211ENST00000638889 SPO11Q9Y5K1 396 aa5.31□□□□□ -1.56
CCDC7-211ENST00000638889 TNPO3Q9Y5L0 923 aaKnown RBP5.31□□□□□ -1.56
CCDC7-211ENST00000638889 CBX4O00257 560 aa5.3□□□□□ -1.56
CCDC7-211ENST00000638889 NRP1O14786 923 aa5.3□□□□□ -1.56
CCDC7-211ENST00000638889 DNAJC8O75937 253 aaPredicted RBP5.3□□□□□ -1.56
CCDC7-211ENST00000638889 PRPF6O94906 941 aaKnown RBP5.3□□□□□ -1.56
CCDC7-211ENST00000638889 BMP5P22003 454 aa5.3□□□□□ -1.56
CCDC7-211ENST00000638889 PROZP22891 400 aa5.3□□□□□ -1.56
CCDC7-211ENST00000638889 FSTL1Q12841 308 aa5.3□□□□□ -1.56
CCDC7-211ENST00000638889 PTPAQ15257 358 aa5.3□□□□□ -1.56
CCDC7-211ENST00000638889 PIK3R6Q5UE93 754 aa5.3□□□□□ -1.56
CCDC7-211ENST00000638889 MBNL2Q5VZF2 373 aaKnown RBP5.3□□□□□ -1.56
CCDC7-211ENST00000638889 KIAA1841Q6NSI8 718 aa5.3□□□□□ -1.56
CCDC7-211ENST00000638889 UBE2R2Q712K3 238 aaPredicted RBP5.3□□□□□ -1.56
CCDC7-211ENST00000638889 PPP1R14CQ8TAE6 165 aa5.3□□□□□ -1.56
CCDC7-211ENST00000638889 PGBD4Q96DM1 585 aa5.3□□□□□ -1.56
CCDC7-211ENST00000638889 UIMC1Q96RL1 719 aa5.3□□□□□ -1.56
CCDC7-211ENST00000638889 ELF4Q99607 663 aaPredicted RBP5.3□□□□□ -1.56
CCDC7-211ENST00000638889 PDCD2LQ9BRP1 358 aa5.3□□□□□ -1.56
CCDC7-211ENST00000638889 MTG2Q9H4K7 406 aa5.3□□□□□ -1.56
CCDC7-211ENST00000638889 NCDNQ9UBB6 729 aa5.3□□□□□ -1.56
CCDC7-211ENST00000638889 PACSIN3Q9UKS6 424 aa5.3□□□□□ -1.56
CCDC7-211ENST00000638889 TRIM24O15164 1050 aa5.29□□□□□ -1.56
CCDC7-211ENST00000638889 OPHN1O60890 802 aa5.29□□□□□ -1.56
CCDC7-211ENST00000638889 RECQL4O94761 1208 aa5.29□□□□□ -1.56
CCDC7-211ENST00000638889 ABHD16AO95870 558 aa5.29□□□□□ -1.56
CCDC7-211ENST00000638889 SLC9A1P19634 815 aa5.29□□□□□ -1.56
CCDC7-211ENST00000638889 ESRP1Q6NXG1 681 aaKnown RBP5.29□□□□□ -1.56
CCDC7-211ENST00000638889 LRRC55Q6ZSA7 311 aa5.29□□□□□ -1.56
CCDC7-211ENST00000638889 HIST1H2AHQ96KK5 128 aa5.29□□□□□ -1.56
CCDC7-211ENST00000638889 HIST1H2AJQ99878 128 aa5.29□□□□□ -1.56
CCDC7-211ENST00000638889 ENKD1Q9H0I2 346 aa5.29□□□□□ -1.56
CCDC7-211ENST00000638889 HS3ST4Q9Y661 456 aa5.29□□□□□ -1.56
CCDC7-211ENST00000638889 A0A0A6YYK5 440 aaPredicted RBP5.28□□□□□ -1.56
CCDC7-211ENST00000638889 HOXA3O43365 443 aaPredicted RBP5.28□□□□□ -1.56
CCDC7-211ENST00000638889 LMNAP02545 664 aaKnown RBP5.28□□□□□ -1.56
CCDC7-211ENST00000638889 FBLP22087 321 aaKnown RBP5.28□□□□□ -1.56
CCDC7-211ENST00000638889 NR4A1P22736 598 aa5.28□□□□□ -1.56
CCDC7-211ENST00000638889 ZNF460Q14592 562 aa5.28□□□□□ -1.56
CCDC7-211ENST00000638889 SF3A1Q15459 793 aaKnown RBP5.28□□□□□ -1.56
CCDC7-211ENST00000638889 NFE2L2Q16236 605 aa5.28□□□□□ -1.56
CCDC7-211ENST00000638889 CREB3L3Q68CJ9 461 aa5.28□□□□□ -1.56
CCDC7-211ENST00000638889 CDCA2Q69YH5 1023 aaPredicted RBP5.28□□□□□ -1.56
CCDC7-211ENST00000638889 UNC5BQ8IZJ1 945 aa5.28□□□□□ -1.56
CCDC7-211ENST00000638889 PROKR1Q8TCW9 393 aa5.28□□□□□ -1.56
CCDC7-211ENST00000638889 ORAI3Q9BRQ5 295 aa5.28□□□□□ -1.56
CCDC7-211ENST00000638889 NOL10Q9BSC4 688 aaKnown RBP5.28□□□□□ -1.56
CCDC7-211ENST00000638889 SOX7Q9BT81 388 aa5.28□□□□□ -1.56
CCDC7-211ENST00000638889 MYL10Q9BUA6 226 aa5.28□□□□□ -1.56
CCDC7-211ENST00000638889 RFPL3O75679 317 aa5.27□□□□□ -1.57
CCDC7-211ENST00000638889 JMJD7P0C870 316 aa5.27□□□□□ -1.57
CCDC7-211ENST00000638889 GAAP10253 952 aa5.27□□□□□ -1.57
CCDC7-211ENST00000638889 TAP1Q03518 808 aa5.27□□□□□ -1.57
CCDC7-211ENST00000638889 IQSEC1Q6DN90 963 aa5.27□□□□□ -1.57
CCDC7-211ENST00000638889 KCNV1Q6PIU1 500 aa5.27□□□□□ -1.57
CCDC7-211ENST00000638889 GLB1L3Q8NCI6 653 aaPredicted RBP5.27□□□□□ -1.57
CCDC7-211ENST00000638889 PMFBP1Q8TBY8 1022 aa5.27□□□□□ -1.57
CCDC7-211ENST00000638889 MLST8Q9BVC4 326 aa5.27□□□□□ -1.57
CCDC7-211ENST00000638889 TOMM22Q9NS69 142 aa5.27□□□□□ -1.57
CCDC7-211ENST00000638889 OXSMQ9NWU1 459 aa5.27□□□□□ -1.57
CCDC7-211ENST00000638889 SORCS3Q9UPU3 1222 aa5.27□□□□□ -1.57
CCDC7-211ENST00000638889 B3GALT2O43825 422 aa5.26□□□□□ -1.57
CCDC7-211ENST00000638889 STC2O76061 302 aa5.26□□□□□ -1.57
CCDC7-211ENST00000638889 APOL3O95236 402 aa5.26□□□□□ -1.57
CCDC7-211ENST00000638889 GYPEP15421 78 aa5.26□□□□□ -1.57
CCDC7-211ENST00000638889 HK1P19367 917 aa5.26□□□□□ -1.57
CCDC7-211ENST00000638889 WNT3AP56704 352 aa5.26□□□□□ -1.57
CCDC7-211ENST00000638889 LRRC32Q14392 662 aa5.26□□□□□ -1.57
CCDC7-211ENST00000638889 CFAP100Q494V2 611 aa5.26□□□□□ -1.57
CCDC7-211ENST00000638889 TIGD2Q4W5G0 525 aa5.26□□□□□ -1.57
CCDC7-211ENST00000638889 PLEKHG4Q58EX7 1191 aa5.26□□□□□ -1.57
CCDC7-211ENST00000638889 UNQ6494/PRO21346Q6UXR6 183 aa5.26□□□□□ -1.57
CCDC7-211ENST00000638889 FAM83AQ86UY5 434 aa5.26□□□□□ -1.57
CCDC7-211ENST00000638889 KIF18BQ86Y91 864 aa5.26□□□□□ -1.57
CCDC7-211ENST00000638889 VRK3Q8IV63 474 aa5.26□□□□□ -1.57
CCDC7-211ENST00000638889 CPT1CQ8TCG5 803 aa5.26□□□□□ -1.57
CCDC7-211ENST00000638889 VOPP1Q96AW1 172 aa5.26□□□□□ -1.57
CCDC7-211ENST00000638889 FAM193BQ96PV7 902 aaPredicted RBP5.26□□□□□ -1.57
CCDC7-211ENST00000638889 OSBPL2Q9H1P3 480 aa5.26□□□□□ -1.57
CCDC7-211ENST00000638889 POFUT1Q9H488 388 aa5.26□□□□□ -1.57
CCDC7-211ENST00000638889 TOR3AQ9H497 397 aa5.26□□□□□ -1.57
CCDC7-211ENST00000638889 USP36Q9P275 1121 aaKnown RBP5.26□□□□□ -1.57
CCDC7-211ENST00000638889 ZKSCAN5Q9Y2L8 839 aa5.26□□□□□ -1.57
CCDC7-211ENST00000638889 MYPNQ86TC9 1320 aa5.25□□□□□ -1.57
CCDC7-211ENST00000638889 COL4A3Q01955 1670 aa5.25□□□□□ -1.57
CCDC7-211ENST00000638889 GRID2IPA4D2P6 1211 aa5.25□□□□□ -1.57
CCDC7-211ENST00000638889 ALDH1A2O94788 518 aa5.25□□□□□ -1.57
CCDC7-211ENST00000638889 SCAF4O95104 1147 aaKnown RBP5.25□□□□□ -1.57
CCDC7-211ENST00000638889 LAG3P18627 525 aa5.25□□□□□ -1.57
CCDC7-211ENST00000638889 CD40P25942 277 aa5.25□□□□□ -1.57
CCDC7-211ENST00000638889 SQSTM1Q13501 440 aa5.25□□□□□ -1.57
CCDC7-211ENST00000638889 DOK3Q7L591 496 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms