RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 ITGA9Q13797 1035 aa12.92□□□□□ -0.34
CAPN3-221ENST00000638141 CCDC6Q16204 474 aa12.92□□□□□ -0.34
CAPN3-221ENST00000638141 VSTM1Q6UX27 236 aa12.92□□□□□ -0.34
CAPN3-221ENST00000638141 TMTC3Q6ZXV5 915 aa12.92□□□□□ -0.34
CAPN3-221ENST00000638141 TTC8Q8TAM2 541 aa12.92□□□□□ -0.34
CAPN3-221ENST00000638141 DDX27Q96GQ7 796 aaKnown RBP12.92□□□□□ -0.34
CAPN3-221ENST00000638141 NLRP3Q96P20 1036 aa12.92□□□□□ -0.34
CAPN3-221ENST00000638141 TRIM9Q9C026 710 aa12.92□□□□□ -0.34
CAPN3-221ENST00000638141 SAR1AQ9NR31 198 aa12.92□□□□□ -0.34
CAPN3-221ENST00000638141 STK32BQ9NY57 414 aa12.92□□□□□ -0.34
CAPN3-221ENST00000638141 STX18Q9P2W9 335 aaKnown RBP12.92□□□□□ -0.34
CAPN3-221ENST00000638141 HSFX1Q9UBD0 423 aa12.92□□□□□ -0.34
CAPN3-221ENST00000638141 SH3GLB1Q9Y371 365 aa12.92□□□□□ -0.34
CAPN3-221ENST00000638141 SMIM31A0A1B0GVY4 71 aa12.91□□□□□ -0.34
CAPN3-221ENST00000638141 TMEM120BA0PK00 339 aa12.91□□□□□ -0.34
CAPN3-221ENST00000638141 GSG1L2A8MUP6 293 aa12.91□□□□□ -0.34
CAPN3-221ENST00000638141 MAPK13O15264 365 aa12.91□□□□□ -0.34
CAPN3-221ENST00000638141 BIRC5O15392 142 aa12.91□□□□□ -0.34
CAPN3-221ENST00000638141 MAGEB2O15479 319 aa12.91□□□□□ -0.34
CAPN3-221ENST00000638141 RAD21O60216 631 aa12.91□□□□□ -0.34
CAPN3-221ENST00000638141 IDH1O75874 414 aaKnown RBP12.91□□□□□ -0.34
CAPN3-221ENST00000638141 ITGA4P13612 1032 aa12.91□□□□□ -0.34
CAPN3-221ENST00000638141 PSMD7P51665 324 aa12.91□□□□□ -0.34
CAPN3-221ENST00000638141 MARK2Q7KZI7 788 aaKnown RBP12.91□□□□□ -0.34
CAPN3-221ENST00000638141 ZNF554Q86TJ5 538 aa12.91□□□□□ -0.34
CAPN3-221ENST00000638141 CCDC82Q8N4S0 544 aa12.91□□□□□ -0.34
CAPN3-221ENST00000638141 MTRF1LQ9UGC7 380 aaKnown RBP12.91□□□□□ -0.34
CAPN3-221ENST00000638141 RASAL2Q9UJF2 1139 aa12.91□□□□□ -0.34
CAPN3-221ENST00000638141 CNTNAP5Q8WYK1 1306 aa12.91□□□□□ -0.34
CAPN3-221ENST00000638141 A0A087X0T9 212 aa12.91□□□□□ -0.34
CAPN3-221ENST00000638141 PVALEFA0A1B0GWK0 134 aa12.91□□□□□ -0.34
CAPN3-221ENST00000638141 RIPK2O43353 540 aa12.91□□□□□ -0.34
CAPN3-221ENST00000638141 FAM228BP0C875 321 aa12.91□□□□□ -0.34
CAPN3-221ENST00000638141 RARGP13631 454 aa12.91□□□□□ -0.34
CAPN3-221ENST00000638141 KCNMA1Q12791 1236 aa12.91□□□□□ -0.34
CAPN3-221ENST00000638141 PIK3AP1Q6ZUJ8 805 aa12.91□□□□□ -0.34
CAPN3-221ENST00000638141 ALDH16A1Q8IZ83 802 aa12.91□□□□□ -0.34
CAPN3-221ENST00000638141 GUF1Q8N442 669 aaKnown RBP12.91□□□□□ -0.34
CAPN3-221ENST00000638141 NAT14Q8WUY8 206 aa12.91□□□□□ -0.34
CAPN3-221ENST00000638141 NRG4Q8WWG1 115 aa12.91□□□□□ -0.34
CAPN3-221ENST00000638141 HES6Q96HZ4 224 aa12.91□□□□□ -0.34
CAPN3-221ENST00000638141 LRRC37BQ96QE4 947 aa12.91□□□□□ -0.34
CAPN3-221ENST00000638141 TGS1Q96RS0 853 aaKnown RBP12.91□□□□□ -0.34
CAPN3-221ENST00000638141 V9GY48 417 aaPredicted RBP12.91□□□□□ -0.34
CAPN3-221ENST00000638141 TNKSO95271 1327 aa12.9□□□□□ -0.34
CAPN3-221ENST00000638141 KIAA0391O15091 583 aaKnown RBP12.9□□□□□ -0.34
CAPN3-221ENST00000638141 MAP3K7O43318 606 aa12.9□□□□□ -0.34
CAPN3-221ENST00000638141 STRNO43815 780 aa12.9□□□□□ -0.34
CAPN3-221ENST00000638141 ENTPD5O75356 428 aa12.9□□□□□ -0.34
CAPN3-221ENST00000638141 CSF1RP07333 972 aa12.9□□□□□ -0.34
CAPN3-221ENST00000638141 T-ENOLP0DO92 83 aa12.9□□□□□ -0.34
CAPN3-221ENST00000638141 HPCAP84074 193 aa12.9□□□□□ -0.34
CAPN3-221ENST00000638141 DR1Q01658 176 aa12.9□□□□□ -0.34
CAPN3-221ENST00000638141 BTG3Q14201 252 aaPredicted RBP12.9□□□□□ -0.34
CAPN3-221ENST00000638141 KBTBD12Q3ZCT8 623 aa12.9□□□□□ -0.34
CAPN3-221ENST00000638141 ZNF568Q3ZCX4 644 aa12.9□□□□□ -0.34
CAPN3-221ENST00000638141 GALNT17Q6IS24 598 aa12.9□□□□□ -0.34
CAPN3-221ENST00000638141 TPCN2Q8NHX9 752 aa12.9□□□□□ -0.34
CAPN3-221ENST00000638141 EPS8L3Q8TE67 593 aaKnown RBP12.9□□□□□ -0.34
CAPN3-221ENST00000638141 ERP27Q96DN0 273 aa12.9□□□□□ -0.34
CAPN3-221ENST00000638141 CELF4Q9BZC1 486 aaKnown RBP12.9□□□□□ -0.34
CAPN3-221ENST00000638141 RIC8AQ9NPQ8 531 aa12.9□□□□□ -0.34
CAPN3-221ENST00000638141 TBCCD1Q9NVR7 557 aa12.9□□□□□ -0.34
CAPN3-221ENST00000638141 PTTG2Q9NZH5 202 aa12.9□□□□□ -0.34
CAPN3-221ENST00000638141 CHKBQ9Y259 395 aa12.9□□□□□ -0.34
CAPN3-221ENST00000638141 UMODL1Q5DID0 1318 aa12.9□□□□□ -0.34
CAPN3-221ENST00000638141 H0Y3Z8 333 aa12.89□□□□□ -0.35
CAPN3-221ENST00000638141 BCRP11274 1271 aa12.89□□□□□ -0.35
CAPN3-221ENST00000638141 SCG2P13521 617 aa12.89□□□□□ -0.35
CAPN3-221ENST00000638141 CPA3P15088 417 aa12.89□□□□□ -0.35
CAPN3-221ENST00000638141 EPHB2P29323 1055 aa12.89□□□□□ -0.35
CAPN3-221ENST00000638141 TMEM62Q0P6H9 643 aa12.89□□□□□ -0.35
CAPN3-221ENST00000638141 TRIM28Q13263 835 aaKnown RBP12.89□□□□□ -0.35
CAPN3-221ENST00000638141 KIAA1755Q5JYT7 1200 aa12.89□□□□□ -0.35
CAPN3-221ENST00000638141 FAM83BQ5T0W9 1011 aa12.89□□□□□ -0.35
CAPN3-221ENST00000638141 PI16Q6UXB8 463 aa12.89□□□□□ -0.35
CAPN3-221ENST00000638141 RGS9BPQ6ZS82 235 aa12.89□□□□□ -0.35
CAPN3-221ENST00000638141 ARHGEF18Q6ZSZ5 1173 aa12.89□□□□□ -0.35
CAPN3-221ENST00000638141 BARGINQ6ZT62 677 aa12.89□□□□□ -0.35
CAPN3-221ENST00000638141 CCDC80Q76M96 950 aa12.89□□□□□ -0.35
CAPN3-221ENST00000638141 CMTR1Q8N1G2 835 aaKnown RBP12.89□□□□□ -0.35
CAPN3-221ENST00000638141 SRBD1Q8N5C6 995 aaKnown RBP12.89□□□□□ -0.35
CAPN3-221ENST00000638141 MPHOSPH6Q99547 160 aaKnown RBP12.89□□□□□ -0.35
CAPN3-221ENST00000638141 TRIM51Q9BSJ1 452 aa12.89□□□□□ -0.35
CAPN3-221ENST00000638141 KIAA1683Q9H0B3 1180 aa12.89□□□□□ -0.35
CAPN3-221ENST00000638141 SEMA6BQ9H3T3 888 aa12.89□□□□□ -0.35
CAPN3-221ENST00000638141 BARX2Q9UMQ3 279 aaPredicted RBP12.89□□□□□ -0.35
CAPN3-221ENST00000638141 DUOX1Q9NRD9 1551 aa12.89□□□□□ -0.35
CAPN3-221ENST00000638141 ZNF189O75820 626 aaPredicted RBP12.89□□□□□ -0.35
CAPN3-221ENST00000638141 NOL4O94818 638 aa12.89□□□□□ -0.35
CAPN3-221ENST00000638141 PHKG2P15735 406 aa12.89□□□□□ -0.35
CAPN3-221ENST00000638141 CD97P48960 835 aa12.89□□□□□ -0.35
CAPN3-221ENST00000638141 RTP1P59025 263 aa12.89□□□□□ -0.35
CAPN3-221ENST00000638141 STRN3Q13033 797 aa12.89□□□□□ -0.35
CAPN3-221ENST00000638141 PFKFB3Q16875 520 aaPredicted RBP12.89□□□□□ -0.35
CAPN3-221ENST00000638141 CCDC92Q53HC0 331 aaPredicted RBP12.89□□□□□ -0.35
CAPN3-221ENST00000638141 RBM26Q5T8P6 1007 aaKnown RBP12.89□□□□□ -0.35
CAPN3-221ENST00000638141 PPP1R21Q6ZMI0 780 aa12.89□□□□□ -0.35
CAPN3-221ENST00000638141 TRMT10CQ7L0Y3 403 aaKnown RBP12.89□□□□□ -0.35
CAPN3-221ENST00000638141 PEX26Q7Z412 305 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms