RNA–Protein interactions for RNA: ENST00000637941.1

TCF4-289, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 2,115 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-289ENST00000637941 HPDP32754 393 aaPredicted RBP13.78□□□□□ -0.2
TCF4-289ENST00000637941 LIG3P49916 1009 aa13.78□□□□□ -0.2
TCF4-289ENST00000637941 PPP2R2AP63151 447 aa13.78□□□□□ -0.2
TCF4-289ENST00000637941 DR1Q01658 176 aa13.78□□□□□ -0.2
TCF4-289ENST00000637941 IFFO1Q0D2I5 559 aa13.78□□□□□ -0.2
TCF4-289ENST00000637941 DDX42Q86XP3 938 aaKnown RBP eCLIP13.78□□□□□ -0.2
TCF4-289ENST00000637941 AGPAT1Q99943 283 aa13.78□□□□□ -0.2
TCF4-289ENST00000637941 OSGEPQ9NPF4 335 aa13.78□□□□□ -0.2
TCF4-289ENST00000637941 LARSQ9P2J5 1176 aaKnown RBP13.78□□□□□ -0.2
TCF4-289ENST00000637941 PARP2Q9UGN5 583 aa13.78□□□□□ -0.2
TCF4-289ENST00000637941 TMX2Q9Y320 296 aa13.78□□□□□ -0.2
TCF4-289ENST00000637941 MAPK13O15264 365 aa13.78□□□□□ -0.2
TCF4-289ENST00000637941 PPFIA2O75334 1257 aa13.78□□□□□ -0.2
TCF4-289ENST00000637941 ITGA4P13612 1032 aa13.78□□□□□ -0.2
TCF4-289ENST00000637941 DRG2P55039 364 aaKnown RBP13.78□□□□□ -0.2
TCF4-289ENST00000637941 DHX9Q08211 1270 aaKnown RBP13.78□□□□□ -0.2
TCF4-289ENST00000637941 CBWD6Q4V339 395 aa13.78□□□□□ -0.2
TCF4-289ENST00000637941 CBWD3Q5JTY5 395 aa13.78□□□□□ -0.2
TCF4-289ENST00000637941 CBWD5Q5RIA9 395 aa13.78□□□□□ -0.2
TCF4-289ENST00000637941 MMS22LQ6ZRQ5 1243 aa13.78□□□□□ -0.2
TCF4-289ENST00000637941 C12orf56Q8IXR9 622 aa13.78□□□□□ -0.2
TCF4-289ENST00000637941 ACCSQ96QU6 501 aa13.78□□□□□ -0.2
TCF4-289ENST00000637941 GPR88Q9GZN0 384 aa13.78□□□□□ -0.2
TCF4-289ENST00000637941 RABEP2Q9H5N1 569 aa13.78□□□□□ -0.2
TCF4-289ENST00000637941 TDRD3Q9H7E2 651 aaKnown RBP13.78□□□□□ -0.2
TCF4-289ENST00000637941 ZNF219Q9P2Y4 722 aaPredicted RBP13.78□□□□□ -0.2
TCF4-289ENST00000637941 PCDHAC2Q9Y5I4 1007 aa13.78□□□□□ -0.2
TCF4-289ENST00000637941 K7ENM7 598 aa13.77□□□□□ -0.21
TCF4-289ENST00000637941 FSBPO95073 299 aa13.77□□□□□ -0.21
TCF4-289ENST00000637941 ABCB4P21439 1286 aa13.77□□□□□ -0.21
TCF4-289ENST00000637941 POU5F1Q01860 360 aaKnown RBP13.77□□□□□ -0.21
TCF4-289ENST00000637941 PRPF4BQ13523 1007 aaKnown RBP13.77□□□□□ -0.21
TCF4-289ENST00000637941 PLCB4Q15147 1175 aa13.77□□□□□ -0.21
TCF4-289ENST00000637941 PTPROQ16827 1216 aa13.77□□□□□ -0.21
TCF4-289ENST00000637941 SUGP1Q8IWZ8 645 aaKnown RBP13.77□□□□□ -0.21
TCF4-289ENST00000637941 SLC17A8Q8NDX2 589 aa13.77□□□□□ -0.21
TCF4-289ENST00000637941 OLIG1Q8TAK6 271 aa13.77□□□□□ -0.21
TCF4-289ENST00000637941 IWS1Q96ST2 819 aa13.77□□□□□ -0.21
TCF4-289ENST00000637941 ERP44Q9BS26 406 aa13.77□□□□□ -0.21
TCF4-289ENST00000637941 LXNQ9BS40 222 aa13.77□□□□□ -0.21
TCF4-289ENST00000637941 TIPINQ9BVW5 301 aa13.77□□□□□ -0.21
TCF4-289ENST00000637941 STRA6Q9BX79 667 aa13.77□□□□□ -0.21
TCF4-289ENST00000637941 FAM129AQ9BZQ8 928 aa13.77□□□□□ -0.21
TCF4-289ENST00000637941 NEUROG2Q9H2A3 272 aa13.77□□□□□ -0.21
TCF4-289ENST00000637941 UNC45AQ9H3U1 944 aa13.77□□□□□ -0.21
TCF4-289ENST00000637941 PPP1R9AQ9ULJ8 1098 aa13.77□□□□□ -0.21
TCF4-289ENST00000637941 A0A1W2PRG0 241 aa13.76□□□□□ -0.21
TCF4-289ENST00000637941 GMNCA6NCL1 334 aa13.76□□□□□ -0.21
TCF4-289ENST00000637941 MYO1FO00160 1098 aa13.76□□□□□ -0.21
TCF4-289ENST00000637941 HIP1RO75146 1068 aa13.76□□□□□ -0.21
TCF4-289ENST00000637941 PAEPP09466 180 aa13.76□□□□□ -0.21
TCF4-289ENST00000637941 TRIM49P0CI25 452 aa13.76□□□□□ -0.21
TCF4-289ENST00000637941 TRIM49CP0CI26 452 aa13.76□□□□□ -0.21
TCF4-289ENST00000637941 CHRNA3P32297 505 aa13.76□□□□□ -0.21
TCF4-289ENST00000637941 COG2Q14746 738 aa13.76□□□□□ -0.21
TCF4-289ENST00000637941 ARHGAP44Q17R89 818 aa13.76□□□□□ -0.21
TCF4-289ENST00000637941 KRT71Q3SY84 523 aa13.76□□□□□ -0.21
TCF4-289ENST00000637941 NIPA1Q7RTP0 329 aa13.76□□□□□ -0.21
TCF4-289ENST00000637941 DNAAF5Q86Y56 855 aa13.76□□□□□ -0.21
TCF4-289ENST00000637941 SPICE1Q8N0Z3 855 aa13.76□□□□□ -0.21
TCF4-289ENST00000637941 SUPT20HQ8NEM7 779 aa13.76□□□□□ -0.21
TCF4-289ENST00000637941 RPS6KC1Q96S38 1066 aa13.76□□□□□ -0.21
TCF4-289ENST00000637941 PSMD1Q99460 953 aa13.76□□□□□ -0.21
TCF4-289ENST00000637941 BCCIPQ9P287 314 aaKnown RBP eCLIP13.76□□□□□ -0.21
TCF4-289ENST00000637941 H0YHG0 523 aa13.76□□□□□ -0.21
TCF4-289ENST00000637941 IPO5O00410 1097 aaKnown RBP13.76□□□□□ -0.21
TCF4-289ENST00000637941 PODXLO00592 558 aa13.76□□□□□ -0.21
TCF4-289ENST00000637941 VAMP7P51809 220 aa13.76□□□□□ -0.21
TCF4-289ENST00000637941 SEL1L2Q5TEA6 688 aa13.76□□□□□ -0.21
TCF4-289ENST00000637941 ICE2Q659A1 982 aa13.76□□□□□ -0.21
TCF4-289ENST00000637941 DUPD1Q68J44 220 aa13.76□□□□□ -0.21
TCF4-289ENST00000637941 CCDC174Q6PII3 467 aa13.76□□□□□ -0.21
TCF4-289ENST00000637941 MXRA8Q9BRK3 442 aa13.76□□□□□ -0.21
TCF4-289ENST00000637941 THAP2Q9H0W7 228 aa13.76□□□□□ -0.21
TCF4-289ENST00000637941 TAOK3Q9H2K8 898 aa13.76□□□□□ -0.21
TCF4-289ENST00000637941 DPH5Q9H2P9 285 aa13.76□□□□□ -0.21
TCF4-289ENST00000637941 POLD4Q9HCU8 107 aa13.76□□□□□ -0.21
TCF4-289ENST00000637941 CTTNBP2NLQ9P2B4 639 aa13.76□□□□□ -0.21
TCF4-289ENST00000637941 SLC12A6Q9UHW9 1150 aa13.76□□□□□ -0.21
TCF4-289ENST00000637941 DBR1Q9UK59 544 aaKnown RBP13.76□□□□□ -0.21
TCF4-289ENST00000637941 FEM1BQ9UK73 627 aa13.76□□□□□ -0.21
TCF4-289ENST00000637941 PMM2O15305 246 aa13.75□□□□□ -0.21
TCF4-289ENST00000637941 PHF2O75151 1096 aa13.75□□□□□ -0.21
TCF4-289ENST00000637941 RTN2O75298 545 aa13.75□□□□□ -0.21
TCF4-289ENST00000637941 P4HBP07237 508 aaKnown RBP13.75□□□□□ -0.21
TCF4-289ENST00000637941 GPC5P78333 572 aa13.75□□□□□ -0.21
TCF4-289ENST00000637941 PADI6Q6TGC4 694 aa13.75□□□□□ -0.21
TCF4-289ENST00000637941 B3GNT9Q6UX72 402 aa13.75□□□□□ -0.21
TCF4-289ENST00000637941 MIER3Q7Z3K6 550 aa13.75□□□□□ -0.21
TCF4-289ENST00000637941 CNPY4Q8N129 248 aa13.75□□□□□ -0.21
TCF4-289ENST00000637941 P3H4Q92791 437 aa13.75□□□□□ -0.21
TCF4-289ENST00000637941 WNT8AQ9H1J5 351 aa13.75□□□□□ -0.21
TCF4-289ENST00000637941 DEFB129Q9H1M3 183 aa13.75□□□□□ -0.21
TCF4-289ENST00000637941 ACTR5Q9H9F9 607 aaPredicted RBP13.75□□□□□ -0.21
TCF4-289ENST00000637941 MTRF1LQ9UGC7 380 aaKnown RBP13.75□□□□□ -0.21
TCF4-289ENST00000637941 EMSYQ7Z589 1322 aa13.75□□□□□ -0.21
TCF4-289ENST00000637941 IGSF9BQ9UPX0 1349 aa13.75□□□□□ -0.21
TCF4-289ENST00000637941 FOXN3O00409 490 aaPredicted RBP13.75□□□□□ -0.21
TCF4-289ENST00000637941 TRAPPC3O43617 180 aa13.75□□□□□ -0.21
TCF4-289ENST00000637941 NUDT17P0C025 328 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms