RNA–Protein interactions for RNA: ENST00000637769.1

CACNA1A-247, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-247ENST00000637769 GPIHBP1Q8IV16 184 aa19.13■□□□□ 0.65
CACNA1A-247ENST00000637769 EGFL8Q99944 293 aa19.13■□□□□ 0.65
CACNA1A-247ENST00000637769 ELAC2Q9BQ52 826 aaKnown RBP19.13■□□□□ 0.65
CACNA1A-247ENST00000637769 PARD6BQ9BYG5 372 aa19.13■□□□□ 0.65
CACNA1A-247ENST00000637769 EPS8L2Q9H6S3 715 aa19.13■□□□□ 0.65
CACNA1A-247ENST00000637769 DYRK4Q9NR20 520 aa19.13■□□□□ 0.65
CACNA1A-247ENST00000637769 IRX1P78414 480 aaPredicted RBP19.13■□□□□ 0.65
CACNA1A-247ENST00000637769 PDCLQ13371 301 aa19.13■□□□□ 0.65
CACNA1A-247ENST00000637769 SH3GL2Q99962 352 aa19.13■□□□□ 0.65
CACNA1A-247ENST00000637769 PDIA3P30101 505 aaKnown RBP19.12■□□□□ 0.65
CACNA1A-247ENST00000637769 OR6B2Q6IFH4 312 aa19.12■□□□□ 0.65
CACNA1A-247ENST00000637769 EMILIN3Q9NT22 766 aa19.12■□□□□ 0.65
CACNA1A-247ENST00000637769 ATG3Q9NT62 314 aa19.12■□□□□ 0.65
CACNA1A-247ENST00000637769 PDXDC2PQ6P474 469 aa19.12■□□□□ 0.65
CACNA1A-247ENST00000637769 FAM160B2Q86V87 743 aa19.12■□□□□ 0.65
CACNA1A-247ENST00000637769 BTN2A2Q8WVV5 523 aa19.12■□□□□ 0.65
CACNA1A-247ENST00000637769 MRPL48Q96GC5 212 aaKnown RBP19.12■□□□□ 0.65
CACNA1A-247ENST00000637769 PCDHA5Q9Y5H7 936 aa19.12■□□□□ 0.65
CACNA1A-247ENST00000637769 MMP1P03956 469 aa19.12■□□□□ 0.65
CACNA1A-247ENST00000637769 TRAF7Q6Q0C0 670 aa19.12■□□□□ 0.65
CACNA1A-247ENST00000637769 GID8Q9NWU2 228 aa19.12■□□□□ 0.65
CACNA1A-247ENST00000637769 MAP3K19Q56UN5 1328 aa19.12■□□□□ 0.65
CACNA1A-247ENST00000637769 DNAL1Q4LDG9 190 aa19.12■□□□□ 0.65
CACNA1A-247ENST00000637769 C16orf89Q6UX73 402 aa19.12■□□□□ 0.65
CACNA1A-247ENST00000637769 SUCLG2Q96I99 432 aa19.12■□□□□ 0.65
CACNA1A-247ENST00000637769 SH3KBP1Q96B97 665 aa19.12■□□□□ 0.65
CACNA1A-247ENST00000637769 PLEKHA8Q96JA3 519 aa19.12■□□□□ 0.65
CACNA1A-247ENST00000637769 GPC5P78333 572 aa19.12■□□□□ 0.65
CACNA1A-247ENST00000637769 STXBP2Q15833 593 aa19.12■□□□□ 0.65
CACNA1A-247ENST00000637769 UGP2Q16851 508 aa19.12■□□□□ 0.65
CACNA1A-247ENST00000637769 ZNF699Q32M78 642 aa19.12■□□□□ 0.65
CACNA1A-247ENST00000637769 ADAM22Q9P0K1 906 aa19.12■□□□□ 0.65
CACNA1A-247ENST00000637769 PSMD3O43242 534 aa19.12■□□□□ 0.65
CACNA1A-247ENST00000637769 DHX34Q14147 1143 aaKnown RBP19.12■□□□□ 0.65
CACNA1A-247ENST00000637769 ALKBH5Q6P6C2 394 aaKnown RBP19.12■□□□□ 0.65
CACNA1A-247ENST00000637769 HIPK4Q8NE63 616 aa19.12■□□□□ 0.65
CACNA1A-247ENST00000637769 COG1Q8WTW3 980 aa19.12■□□□□ 0.65
CACNA1A-247ENST00000637769 TMEM161AQ9NX61 479 aa19.12■□□□□ 0.65
CACNA1A-247ENST00000637769 AIPL1Q9NZN9 384 aa19.12■□□□□ 0.65
CACNA1A-247ENST00000637769 BFARQ9NZS9 450 aa19.12■□□□□ 0.65
CACNA1A-247ENST00000637769 IP6K2Q9UHH9 426 aa19.12■□□□□ 0.65
CACNA1A-247ENST00000637769 H2AFY2Q9P0M6 372 aaPredicted RBP19.11■□□□□ 0.65
CACNA1A-247ENST00000637769 ANO9A1A5B4 782 aa19.11■□□□□ 0.65
CACNA1A-247ENST00000637769 HADHAP40939 763 aa19.11■□□□□ 0.65
CACNA1A-247ENST00000637769 SCRN1Q12765 414 aa19.11■□□□□ 0.65
CACNA1A-247ENST00000637769 MB21D1Q8N884 522 aa19.11■□□□□ 0.65
CACNA1A-247ENST00000637769 ADNPQ9H2P0 1102 aa19.11■□□□□ 0.65
CACNA1A-247ENST00000637769 SERPINB13Q9UIV8 391 aa19.11■□□□□ 0.65
CACNA1A-247ENST00000637769 ZNF804BA4D1E1 1349 aa19.11■□□□□ 0.65
CACNA1A-247ENST00000637769 HUS1O60921 280 aa19.11■□□□□ 0.65
CACNA1A-247ENST00000637769 NUP62P37198 522 aaPredicted RBP19.11■□□□□ 0.65
CACNA1A-247ENST00000637769 PHKA2P46019 1235 aa19.11■□□□□ 0.65
CACNA1A-247ENST00000637769 TMED10P49755 219 aaKnown RBP19.11■□□□□ 0.65
CACNA1A-247ENST00000637769 HDLBPQ00341 1268 aaKnown RBP19.11■□□□□ 0.65
CACNA1A-247ENST00000637769 LRRC8EQ6NSJ5 796 aa19.11■□□□□ 0.65
CACNA1A-247ENST00000637769 ECT2Q9H8V3 914 aa19.11■□□□□ 0.65
CACNA1A-247ENST00000637769 SEC24BO95487 1268 aa19.11■□□□□ 0.65
CACNA1A-247ENST00000637769 SOX6P35712 828 aa19.11■□□□□ 0.65
CACNA1A-247ENST00000637769 DAB2IPQ5VWQ8 1189 aa19.11■□□□□ 0.65
CACNA1A-247ENST00000637769 RASSF3Q86WH2 238 aa19.11■□□□□ 0.65
CACNA1A-247ENST00000637769 PAPOLBQ9NRJ5 636 aaKnown RBP19.11■□□□□ 0.65
CACNA1A-247ENST00000637769 SMG5Q9UPR3 1016 aaKnown RBP19.11■□□□□ 0.65
CACNA1A-247ENST00000637769 BTDP43251 543 aa19.11■□□□□ 0.65
CACNA1A-247ENST00000637769 ADCY1Q08828 1119 aa19.11■□□□□ 0.65
CACNA1A-247ENST00000637769 PPHLN1Q8NEY8 458 aaKnown RBP19.11■□□□□ 0.65
CACNA1A-247ENST00000637769 ABCC2Q92887 1545 aa19.11■□□□□ 0.65
CACNA1A-247ENST00000637769 GSPT1P15170 499 aaKnown RBP19.11■□□□□ 0.65
CACNA1A-247ENST00000637769 ASAP3Q8TDY4 903 aa19.11■□□□□ 0.65
CACNA1A-247ENST00000637769 SP110Q9HB58 689 aa19.11■□□□□ 0.65
CACNA1A-247ENST00000637769 NGRNQ9NPE2 291 aaKnown RBP19.11■□□□□ 0.65
CACNA1A-247ENST00000637769 CCNE1P24864 410 aa19.11■□□□□ 0.65
CACNA1A-247ENST00000637769 HSPA13P48723 471 aa19.11■□□□□ 0.65
CACNA1A-247ENST00000637769 DSTYKQ6XUX3 929 aa19.11■□□□□ 0.65
CACNA1A-247ENST00000637769 ANKRD13CQ8N6S4 541 aa19.11■□□□□ 0.65
CACNA1A-247ENST00000637769 SYBUQ9NX95 663 aa19.11■□□□□ 0.65
CACNA1A-247ENST00000637769 USP19O94966 1318 aa19.1■□□□□ 0.65
CACNA1A-247ENST00000637769 PNMA6EA0A0J9YXQ4 647 aa19.1■□□□□ 0.65
CACNA1A-247ENST00000637769 PLA2G4BP0C869 781 aa19.1■□□□□ 0.65
CACNA1A-247ENST00000637769 BBS7Q8IWZ6 715 aa19.1■□□□□ 0.65
CACNA1A-247ENST00000637769 ASIC4Q96FT7 647 aa19.1■□□□□ 0.65
CACNA1A-247ENST00000637769 RGL1Q9NZL6 768 aa19.1■□□□□ 0.65
CACNA1A-247ENST00000637769 MAGED2Q9UNF1 606 aaPredicted RBP19.1■□□□□ 0.65
CACNA1A-247ENST00000637769 H7C0S8 307 aa19.1■□□□□ 0.65
CACNA1A-247ENST00000637769 PNMA6AP0CW24 399 aaPredicted RBP19.1■□□□□ 0.65
CACNA1A-247ENST00000637769 CLCN6P51797 869 aa19.1■□□□□ 0.65
CACNA1A-247ENST00000637769 VCPP55072 806 aaKnown RBP19.1■□□□□ 0.65
CACNA1A-247ENST00000637769 ZNF827Q17R98 1081 aa19.1■□□□□ 0.65
CACNA1A-247ENST00000637769 PARP9Q8IXQ6 854 aa19.1■□□□□ 0.65
CACNA1A-247ENST00000637769 ZBTB12Q9Y330 459 aaPredicted RBP19.1■□□□□ 0.65
CACNA1A-247ENST00000637769 CLDN3O15551 220 aa19.1■□□□□ 0.65
CACNA1A-247ENST00000637769 APPL2Q8NEU8 664 aa19.1■□□□□ 0.65
CACNA1A-247ENST00000637769 SDR42E1Q8WUS8 393 aa19.1■□□□□ 0.65
CACNA1A-247ENST00000637769 PRPF4O43172 522 aaKnown RBP eCLIP19.1■□□□□ 0.65
CACNA1A-247ENST00000637769 KLC1Q07866 573 aa19.1■□□□□ 0.65
CACNA1A-247ENST00000637769 GPR108Q9NPR9 543 aa19.1■□□□□ 0.65
CACNA1A-247ENST00000637769 CLIC4Q9Y696 253 aa19.1■□□□□ 0.65
CACNA1A-247ENST00000637769 BMP3P12645 472 aa19.09■□□□□ 0.65
CACNA1A-247ENST00000637769 ARFIP2P53365 341 aa19.09■□□□□ 0.65
CACNA1A-247ENST00000637769 KCNQ4P56696 695 aa19.09■□□□□ 0.65
CACNA1A-247ENST00000637769 BPIFA3Q9BQP9 254 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms