RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 SEC24BO95487 1268 aa22.44■■□□□ 1.18
CLN6-222ENST00000637667 RBM10P98175 930 aaKnown RBP22.44■■□□□ 1.18
CLN6-222ENST00000637667 TRIM29Q14134 588 aa22.44■■□□□ 1.18
CLN6-222ENST00000637667 EMC2Q15006 297 aa22.44■■□□□ 1.18
CLN6-222ENST00000637667 CALCRLQ16602 461 aa22.44■■□□□ 1.18
CLN6-222ENST00000637667 XKR9Q5GH70 373 aa22.44■■□□□ 1.18
CLN6-222ENST00000637667 SLC39A11Q8N1S5 342 aa22.44■■□□□ 1.18
CLN6-222ENST00000637667 VN1R2Q8NFZ6 395 aa22.44■■□□□ 1.18
CLN6-222ENST00000637667 RSPH1Q8WYR4 309 aa22.44■■□□□ 1.18
CLN6-222ENST00000637667 LPPQ93052 612 aa22.44■■□□□ 1.18
CLN6-222ENST00000637667 BMP2KQ9NSY1 1161 aaPredicted RBP22.44■■□□□ 1.18
CLN6-222ENST00000637667 FAM105AQ9NUU6 356 aa22.44■■□□□ 1.18
CLN6-222ENST00000637667 ZBTB39O15060 712 aa22.43■■□□□ 1.18
CLN6-222ENST00000637667 GAS2O43903 313 aaKnown RBP22.43■■□□□ 1.18
CLN6-222ENST00000637667 SRGAP2CP0DJJ0 459 aa22.43■■□□□ 1.18
CLN6-222ENST00000637667 PLA2G5P39877 138 aa22.43■■□□□ 1.18
CLN6-222ENST00000637667 RAB27AP51159 221 aa22.43■■□□□ 1.18
CLN6-222ENST00000637667 LAMTOR4Q0VGL1 99 aa22.43■■□□□ 1.18
CLN6-222ENST00000637667 ST3GAL1Q11201 340 aa22.43■■□□□ 1.18
CLN6-222ENST00000637667 GLB1LQ6UWU2 654 aa22.43■■□□□ 1.18
CLN6-222ENST00000637667 SRGAP1Q7Z6B7 1085 aa22.43■■□□□ 1.18
CLN6-222ENST00000637667 TPH2Q8IWU9 490 aa22.43■■□□□ 1.18
CLN6-222ENST00000637667 EIF2AK1Q9BQI3 630 aaKnown RBP22.43■■□□□ 1.18
CLN6-222ENST00000637667 AGPAT5Q9NUQ2 364 aa22.43■■□□□ 1.18
CLN6-222ENST00000637667 PCDHA12Q9UN75 941 aa22.43■■□□□ 1.18
CLN6-222ENST00000637667 USP15Q9Y4E8 981 aaPredicted RBP22.43■■□□□ 1.18
CLN6-222ENST00000637667 HIDE1A8MVS5 230 aa22.42■■□□□ 1.18
CLN6-222ENST00000637667 WNT7AO00755 349 aa22.42■■□□□ 1.18
CLN6-222ENST00000637667 ZNF623O75123 536 aa22.42■■□□□ 1.18
CLN6-222ENST00000637667 SLITRK3O94933 977 aa22.42■■□□□ 1.18
CLN6-222ENST00000637667 ALDH7A1P49419 539 aaKnown RBP22.42■■□□□ 1.18
CLN6-222ENST00000637667 BCAR1P56945 870 aa22.42■■□□□ 1.18
CLN6-222ENST00000637667 LONRF3Q496Y0 759 aa22.42■■□□□ 1.18
CLN6-222ENST00000637667 TMC7Q7Z402 723 aa22.42■■□□□ 1.18
CLN6-222ENST00000637667 TCP11Q8WWU5 503 aa22.42■■□□□ 1.18
CLN6-222ENST00000637667 MINDY3Q9H8M7 445 aa22.42■■□□□ 1.18
CLN6-222ENST00000637667 MEIS3P2A8K0S8 358 aa22.41■■□□□ 1.18
CLN6-222ENST00000637667 ASAP2O43150 1006 aa22.41■■□□□ 1.18
CLN6-222ENST00000637667 NEMFO60524 1076 aa22.41■■□□□ 1.18
CLN6-222ENST00000637667 LYPLA2O95372 231 aa22.41■■□□□ 1.18
CLN6-222ENST00000637667 SRGAP2BP0DMP2 458 aa22.41■■□□□ 1.18
CLN6-222ENST00000637667 NOMO2Q5JPE7 1267 aa22.41■■□□□ 1.18
CLN6-222ENST00000637667 FERMT3Q86UX7 667 aa22.41■■□□□ 1.18
CLN6-222ENST00000637667 HSD17B14Q9BPX1 270 aa22.41■■□□□ 1.18
CLN6-222ENST00000637667 TTC12Q9H892 705 aaPredicted RBP22.41■■□□□ 1.18
CLN6-222ENST00000637667 INPP5FQ9Y2H2 1132 aa22.41■■□□□ 1.18
CLN6-222ENST00000637667 HCN4Q9Y3Q4 1203 aa22.41■■□□□ 1.18
CLN6-222ENST00000637667 PCDHB2Q9Y5E7 798 aa22.41■■□□□ 1.18
CLN6-222ENST00000637667 PRR33A8MZF0 331 aa22.4■■□□□ 1.18
CLN6-222ENST00000637667 NT5C1B-RDH14C9J2C7 533 aa22.4■■□□□ 1.18
CLN6-222ENST00000637667 ZC3H11AO75152 810 aaKnown RBP eCLIP22.4■■□□□ 1.18
CLN6-222ENST00000637667 KCNC3Q14003 757 aa22.4■■□□□ 1.18
CLN6-222ENST00000637667 TMEM184AQ6ZMB5 413 aa22.4■■□□□ 1.18
CLN6-222ENST00000637667 RNF149Q8NC42 400 aa22.4■■□□□ 1.18
CLN6-222ENST00000637667 PGBD4Q96DM1 585 aa22.4■■□□□ 1.18
CLN6-222ENST00000637667 MTRQ99707 1265 aa22.4■■□□□ 1.18
CLN6-222ENST00000637667 XPNPEP1Q9NQW7 623 aa22.4■■□□□ 1.18
CLN6-222ENST00000637667 TBC1D13Q9NVG8 400 aa22.4■■□□□ 1.18
CLN6-222ENST00000637667 C5orf42Q9H799 3197 aa22.4■■□□□ 1.18
CLN6-222ENST00000637667 CARNS1A5YM72 827 aa22.39■■□□□ 1.17
CLN6-222ENST00000637667 OFD1O75665 1012 aa22.39■■□□□ 1.17
CLN6-222ENST00000637667 HOXA11P31270 313 aaPredicted RBP22.39■■□□□ 1.17
CLN6-222ENST00000637667 TXKP42681 527 aa22.39■■□□□ 1.17
CLN6-222ENST00000637667 SMC1AQ14683 1233 aaKnown RBP22.39■■□□□ 1.17
CLN6-222ENST00000637667 RNF135Q8IUD6 432 aa22.39■■□□□ 1.17
CLN6-222ENST00000637667 MRPL43Q8N983 215 aaKnown RBP22.39■■□□□ 1.17
CLN6-222ENST00000637667 TMEM169Q96HH4 297 aa22.39■■□□□ 1.17
CLN6-222ENST00000637667 MTMR9Q96QG7 549 aa22.39■■□□□ 1.17
CLN6-222ENST00000637667 ANKEF1Q9NU02 776 aa22.39■■□□□ 1.17
CLN6-222ENST00000637667 LIMCH1Q9UPQ0 1083 aa22.39■■□□□ 1.17
CLN6-222ENST00000637667 MUC6Q6W4X9 2439 aa22.38■■□□□ 1.17
CLN6-222ENST00000637667 C2orf71A6NGG8 1288 aa22.38■■□□□ 1.17
CLN6-222ENST00000637667 TECP42680 631 aa22.38■■□□□ 1.17
CLN6-222ENST00000637667 RNASELQ05823 741 aaKnown RBP22.38■■□□□ 1.17
CLN6-222ENST00000637667 MXD4Q14582 209 aaPredicted RBP22.38■■□□□ 1.17
CLN6-222ENST00000637667 SAFBQ15424 915 aaKnown RBP eCLIP22.38■■□□□ 1.17
CLN6-222ENST00000637667 HERC4Q5GLZ8 1057 aaPredicted RBP22.38■■□□□ 1.17
CLN6-222ENST00000637667 ANKRD54Q6NXT1 300 aa22.38■■□□□ 1.17
CLN6-222ENST00000637667 LLGL2Q6P1M3 1020 aa22.38■■□□□ 1.17
CLN6-222ENST00000637667 MRPL10Q7Z7H8 261 aaKnown RBP22.38■■□□□ 1.17
CLN6-222ENST00000637667 TMEM173Q86WV6 379 aaPredicted RBP22.38■■□□□ 1.17
CLN6-222ENST00000637667 SUSD6Q92537 303 aa22.38■■□□□ 1.17
CLN6-222ENST00000637667 PHF7Q9BWX1 381 aaPredicted RBP22.38■■□□□ 1.17
CLN6-222ENST00000637667 NRDE2Q9H7Z3 1164 aa22.38■■□□□ 1.17
CLN6-222ENST00000637667 MUTYHQ9UIF7 546 aa22.38■■□□□ 1.17
CLN6-222ENST00000637667 ARIH1Q9Y4X5 557 aaPredicted RBP22.38■■□□□ 1.17
CLN6-222ENST00000637667 LOC730098B7Z3J9 87 aa22.37■■□□□ 1.17
CLN6-222ENST00000637667 PTENP60484 403 aa22.37■■□□□ 1.17
CLN6-222ENST00000637667 GUCY1B3Q02153 619 aa22.37■■□□□ 1.17
CLN6-222ENST00000637667 BMS1Q14692 1282 aaKnown RBP22.37■■□□□ 1.17
CLN6-222ENST00000637667 UBXN11Q5T124 520 aa22.37■■□□□ 1.17
CLN6-222ENST00000637667 SYCE2Q6PIF2 218 aa22.37■■□□□ 1.17
CLN6-222ENST00000637667 AGMOQ6ZNB7 445 aa22.37■■□□□ 1.17
CLN6-222ENST00000637667 CCDC83Q8IWF9 413 aa22.37■■□□□ 1.17
CLN6-222ENST00000637667 S1PR5Q9H228 398 aa22.37■■□□□ 1.17
CLN6-222ENST00000637667 TMEM60Q9H2L4 133 aa22.37■■□□□ 1.17
CLN6-222ENST00000637667 DGAT1O75907 488 aa22.36■■□□□ 1.17
CLN6-222ENST00000637667 GALTP07902 379 aa22.36■■□□□ 1.17
CLN6-222ENST00000637667 ATP2B1P20020 1258 aa22.36■■□□□ 1.17
CLN6-222ENST00000637667 TFDP1Q14186 410 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms