RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 RHPN2Q8IUC4 686 aa14.73□□□□□ -0.05
LINC00643-207ENST00000637212 MED15Q96RN5 788 aa14.73□□□□□ -0.05
LINC00643-207ENST00000637212 CTNND2Q9UQB3 1225 aa14.73□□□□□ -0.05
LINC00643-207ENST00000637212 A0A0U1RQG5 324 aaPredicted RBP14.72□□□□□ -0.05
LINC00643-207ENST00000637212 A0A1W2PQ45 241 aaPredicted RBP14.72□□□□□ -0.05
LINC00643-207ENST00000637212 A0A1W2PQY0 241 aa14.72□□□□□ -0.05
LINC00643-207ENST00000637212 DENND3A2RUS2 1198 aa14.72□□□□□ -0.05
LINC00643-207ENST00000637212 LRRIQ4A6NIV6 560 aa14.72□□□□□ -0.05
LINC00643-207ENST00000637212 CCDC85CA6NKD9 419 aa14.72□□□□□ -0.05
LINC00643-207ENST00000637212 CALUO43852 315 aaPredicted RBP14.72□□□□□ -0.05
LINC00643-207ENST00000637212 SRGAP2CP0DJJ0 459 aa14.72□□□□□ -0.05
LINC00643-207ENST00000637212 GJA8P48165 433 aa14.72□□□□□ -0.05
LINC00643-207ENST00000637212 PTENP60484 403 aa14.72□□□□□ -0.05
LINC00643-207ENST00000637212 STRN3Q13033 797 aa14.72□□□□□ -0.05
LINC00643-207ENST00000637212 NFIL3Q16649 462 aa14.72□□□□□ -0.05
LINC00643-207ENST00000637212 EDRF1Q3B7T1 1238 aa14.72□□□□□ -0.05
LINC00643-207ENST00000637212 ZCWPW2Q504Y3 356 aa14.72□□□□□ -0.05
LINC00643-207ENST00000637212 GDF6Q6KF10 455 aaPredicted RBP14.72□□□□□ -0.05
LINC00643-207ENST00000637212 RSPH3Q86UC2 560 aa14.72□□□□□ -0.05
LINC00643-207ENST00000637212 LUZP1Q86V48 1076 aa14.72□□□□□ -0.05
LINC00643-207ENST00000637212 ZBTB8OSQ8IWT0 167 aa14.72□□□□□ -0.05
LINC00643-207ENST00000637212 AOPEPQ8N6M6 819 aa14.72□□□□□ -0.05
LINC00643-207ENST00000637212 ANKLE1Q8NAG6 615 aa14.72□□□□□ -0.05
LINC00643-207ENST00000637212 RNF149Q8NC42 400 aa14.72□□□□□ -0.05
LINC00643-207ENST00000637212 RNF214Q8ND24 703 aa14.72□□□□□ -0.05
LINC00643-207ENST00000637212 U2AF1L4Q8WU68 220 aaKnown RBP14.72□□□□□ -0.05
LINC00643-207ENST00000637212 MCOLN1Q9GZU1 580 aa14.72□□□□□ -0.05
LINC00643-207ENST00000637212 STARD7Q9NQZ5 370 aa14.72□□□□□ -0.05
LINC00643-207ENST00000637212 TYW1Q9NV66 732 aaKnown RBP14.72□□□□□ -0.05
LINC00643-207ENST00000637212 AKT3Q9Y243 479 aa14.72□□□□□ -0.05
LINC00643-207ENST00000637212 ARVCFO00192 962 aa14.71□□□□□ -0.05
LINC00643-207ENST00000637212 RPL13P26373 211 aaKnown RBP14.71□□□□□ -0.05
LINC00643-207ENST00000637212 PHKA2P46019 1235 aa14.71□□□□□ -0.05
LINC00643-207ENST00000637212 MRE11P49959 708 aa14.71□□□□□ -0.05
LINC00643-207ENST00000637212 CDK7P50613 346 aa14.71□□□□□ -0.05
LINC00643-207ENST00000637212 STX17P56962 302 aa14.71□□□□□ -0.05
LINC00643-207ENST00000637212 ZNF200P98182 395 aaPredicted RBP14.71□□□□□ -0.05
LINC00643-207ENST00000637212 FKBP3Q00688 224 aaKnown RBP14.71□□□□□ -0.05
LINC00643-207ENST00000637212 PTK7Q13308 1070 aa14.71□□□□□ -0.05
LINC00643-207ENST00000637212 PCBP1Q15365 356 aaKnown RBP eCLIP14.71□□□□□ -0.05
LINC00643-207ENST00000637212 TPD52L1Q16890 204 aaPredicted RBP14.71□□□□□ -0.05
LINC00643-207ENST00000637212 FAM47CQ5HY64 1035 aa14.71□□□□□ -0.05
LINC00643-207ENST00000637212 HS2ST1Q7LGA3 356 aa14.71□□□□□ -0.05
LINC00643-207ENST00000637212 SRGAP1Q7Z6B7 1085 aa14.71□□□□□ -0.05
LINC00643-207ENST00000637212 SERINC5Q86VE9 423 aa14.71□□□□□ -0.05
LINC00643-207ENST00000637212 MAP4K3Q8IVH8 894 aa14.71□□□□□ -0.05
LINC00643-207ENST00000637212 KSR1Q8IVT5 923 aa14.71□□□□□ -0.05
LINC00643-207ENST00000637212 NELFCDQ8IXH7 590 aa14.71□□□□□ -0.05
LINC00643-207ENST00000637212 SYCP3Q8IZU3 236 aa14.71□□□□□ -0.05
LINC00643-207ENST00000637212 ZBTB10Q96DT7 871 aa14.71□□□□□ -0.05
LINC00643-207ENST00000637212 DUSP9Q99956 384 aaKnown RBP14.71□□□□□ -0.05
LINC00643-207ENST00000637212 INO80BQ9C086 356 aaPredicted RBP14.71□□□□□ -0.05
LINC00643-207ENST00000637212 GBP3Q9H0R5 595 aa14.71□□□□□ -0.05
LINC00643-207ENST00000637212 ADAMTS10Q9H324 1103 aa14.71□□□□□ -0.05
LINC00643-207ENST00000637212 FZD8Q9H461 694 aa14.71□□□□□ -0.05
LINC00643-207ENST00000637212 THAP9Q9H5L6 903 aa14.71□□□□□ -0.05
LINC00643-207ENST00000637212 NFE2L3Q9Y4A8 694 aa14.71□□□□□ -0.05
LINC00643-207ENST00000637212 DOCK5Q9H7D0 1870 aa14.71□□□□□ -0.05
LINC00643-207ENST00000637212 TGFB1I1O43294 461 aa14.7□□□□□ -0.06
LINC00643-207ENST00000637212 GPR32O75388 356 aa14.7□□□□□ -0.06
LINC00643-207ENST00000637212 MYCP01106 439 aaPredicted RBP14.7□□□□□ -0.06
LINC00643-207ENST00000637212 PIGRP01833 764 aa14.7□□□□□ -0.06
LINC00643-207ENST00000637212 GPC3P51654 580 aa14.7□□□□□ -0.06
LINC00643-207ENST00000637212 PMS1P54277 932 aaKnown RBP14.7□□□□□ -0.06
LINC00643-207ENST00000637212 KCNA1Q09470 495 aa14.7□□□□□ -0.06
LINC00643-207ENST00000637212 PTGISQ16647 500 aa14.7□□□□□ -0.06
LINC00643-207ENST00000637212 MAPK6Q16659 721 aa14.7□□□□□ -0.06
LINC00643-207ENST00000637212 FAM187BQ17R55 369 aa14.7□□□□□ -0.06
LINC00643-207ENST00000637212 RUFY4Q6ZNE9 571 aa14.7□□□□□ -0.06
LINC00643-207ENST00000637212 FILIP1Q7Z7B0 1213 aa14.7□□□□□ -0.06
LINC00643-207ENST00000637212 SLC9A9Q8IVB4 645 aa14.7□□□□□ -0.06
LINC00643-207ENST00000637212 C12orf56Q8IXR9 622 aa14.7□□□□□ -0.06
LINC00643-207ENST00000637212 ZC3H3Q8IXZ2 948 aaKnown RBP14.7□□□□□ -0.06
LINC00643-207ENST00000637212 CSGALNACT2Q8N6G5 542 aa14.7□□□□□ -0.06
LINC00643-207ENST00000637212 DNAJB3Q8WWF6 145 aa14.7□□□□□ -0.06
LINC00643-207ENST00000637212 CEP63Q96MT8 703 aa14.7□□□□□ -0.06
LINC00643-207ENST00000637212 TMEM106CQ9BVX2 250 aa14.7□□□□□ -0.06
LINC00643-207ENST00000637212 GCOM2Q9BZD3 368 aaPredicted RBP14.7□□□□□ -0.06
LINC00643-207ENST00000637212 GRPEL1Q9HAV7 217 aa14.7□□□□□ -0.06
LINC00643-207ENST00000637212 IFT122Q9HBG6 1241 aa14.7□□□□□ -0.06
LINC00643-207ENST00000637212 FANCLQ9NW38 375 aa14.7□□□□□ -0.06
LINC00643-207ENST00000637212 ADGRA3Q8IWK6 1321 aa14.69□□□□□ -0.06
LINC00643-207ENST00000637212 A0A087WZ62 844 aa14.69□□□□□ -0.06
LINC00643-207ENST00000637212 ACKR2O00590 384 aa14.69□□□□□ -0.06
LINC00643-207ENST00000637212 CAND2O75155 1236 aa14.69□□□□□ -0.06
LINC00643-207ENST00000637212 VTNP04004 478 aa14.69□□□□□ -0.06
LINC00643-207ENST00000637212 CRYBB1P53674 252 aaPredicted RBP14.69□□□□□ -0.06
LINC00643-207ENST00000637212 NLRP11P59045 1033 aaKnown RBP14.69□□□□□ -0.06
LINC00643-207ENST00000637212 ADAM9Q13443 819 aa14.69□□□□□ -0.06
LINC00643-207ENST00000637212 HSP90AA2PQ14568 343 aaPredicted RBP14.69□□□□□ -0.06
LINC00643-207ENST00000637212 SLFN12LQ6IEE8 588 aa14.69□□□□□ -0.06
LINC00643-207ENST00000637212 ZPBP2Q6X784 338 aa14.69□□□□□ -0.06
LINC00643-207ENST00000637212 FAM114A1Q8IWE2 563 aa14.69□□□□□ -0.06
LINC00643-207ENST00000637212 NLRP7Q8WX94 980 aa14.69□□□□□ -0.06
LINC00643-207ENST00000637212 NLRP4Q96MN2 994 aa14.69□□□□□ -0.06
LINC00643-207ENST00000637212 FDXACB1Q9BRP7 624 aaPredicted RBP14.69□□□□□ -0.06
LINC00643-207ENST00000637212 KIFC3Q9BVG8 833 aa14.69□□□□□ -0.06
LINC00643-207ENST00000637212 SRRTQ9BXP5 876 aaKnown RBP14.69□□□□□ -0.06
LINC00643-207ENST00000637212 CCDC113Q9H0I3 377 aa14.69□□□□□ -0.06
LINC00643-207ENST00000637212 FAM49AQ9H0Q0 323 aaPredicted RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms