RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 MDM2Q00987 491 aaPredicted RBP17.66■□□□□ 0.42
CLN6-216ENST00000636876 POSTNQ15063 836 aa17.66■□□□□ 0.42
CLN6-216ENST00000636876 DEFB128Q7Z7B8 93 aa17.66■□□□□ 0.42
CLN6-216ENST00000636876 FAM228AQ86W67 206 aa17.66■□□□□ 0.42
CLN6-216ENST00000636876 SFR1Q86XK3 245 aa17.66■□□□□ 0.42
CLN6-216ENST00000636876 ZBTB8OSQ8IWT0 167 aa17.66■□□□□ 0.42
CLN6-216ENST00000636876 ELOA2Q8IYF1 753 aaPredicted RBP17.66■□□□□ 0.42
CLN6-216ENST00000636876 NTPCRQ9BSD7 190 aaKnown RBP17.66■□□□□ 0.42
CLN6-216ENST00000636876 KIFC3Q9BVG8 833 aa17.66■□□□□ 0.42
CLN6-216ENST00000636876 MINDY3Q9H8M7 445 aa17.66■□□□□ 0.42
CLN6-216ENST00000636876 AGO3Q9H9G7 860 aaKnown RBP17.66■□□□□ 0.42
CLN6-216ENST00000636876 IL23AQ9NPF7 189 aa17.66■□□□□ 0.42
CLN6-216ENST00000636876 KMT5AQ9NQR1 393 aa17.66■□□□□ 0.42
CLN6-216ENST00000636876 SEL1LQ9UBV2 794 aa17.66■□□□□ 0.42
CLN6-216ENST00000636876 PVALEFA0A1B0GWK0 134 aa17.65■□□□□ 0.42
CLN6-216ENST00000636876 RBAK-RBAKDNI3L0D1 243 aa17.65■□□□□ 0.42
CLN6-216ENST00000636876 SLC16A4O15374 487 aa17.65■□□□□ 0.42
CLN6-216ENST00000636876 RPS6KA5O75582 802 aa17.65■□□□□ 0.42
CLN6-216ENST00000636876 CD52P31358 61 aa17.65■□□□□ 0.42
CLN6-216ENST00000636876 EFNA5P52803 228 aa17.65■□□□□ 0.42
CLN6-216ENST00000636876 SMTNP53814 917 aa17.65■□□□□ 0.42
CLN6-216ENST00000636876 DPYDQ12882 1025 aa17.65■□□□□ 0.42
CLN6-216ENST00000636876 COASYQ13057 564 aa17.65■□□□□ 0.42
CLN6-216ENST00000636876 PAK2Q13177 524 aa17.65■□□□□ 0.42
CLN6-216ENST00000636876 PLEKHG4Q58EX7 1191 aa17.65■□□□□ 0.42
CLN6-216ENST00000636876 HERC4Q5GLZ8 1057 aaPredicted RBP17.65■□□□□ 0.42
CLN6-216ENST00000636876 UNC13DQ70J99 1090 aa17.65■□□□□ 0.42
CLN6-216ENST00000636876 RPUSD2Q8IZ73 545 aaKnown RBP17.65■□□□□ 0.42
CLN6-216ENST00000636876 GPT2Q8TD30 523 aa17.65■□□□□ 0.42
CLN6-216ENST00000636876 FIZ1Q96SL8 496 aa17.65■□□□□ 0.42
CLN6-216ENST00000636876 IFIH1Q9BYX4 1025 aaKnown RBP17.65■□□□□ 0.42
CLN6-216ENST00000636876 ERVK-5Q9HDB9 667 aa17.65■□□□□ 0.42
CLN6-216ENST00000636876 ARHGAP28Q9P2N2 729 aa17.65■□□□□ 0.42
CLN6-216ENST00000636876 HOOK1Q9UJC3 728 aaKnown RBP17.65■□□□□ 0.42
CLN6-216ENST00000636876 INO80B-WBP1J3KQ70 363 aa17.64■□□□□ 0.41
CLN6-216ENST00000636876 KLRC4O43908 158 aa17.64■□□□□ 0.41
CLN6-216ENST00000636876 TRAK2O60296 914 aa17.64■□□□□ 0.41
CLN6-216ENST00000636876 PFKMP08237 780 aa17.64■□□□□ 0.41
CLN6-216ENST00000636876 FGFR4P22455 802 aa17.64■□□□□ 0.41
CLN6-216ENST00000636876 SFPQP23246 707 aaKnown RBP eCLIP17.64■□□□□ 0.41
CLN6-216ENST00000636876 MAGEA10P43363 369 aaPredicted RBP17.64■□□□□ 0.41
CLN6-216ENST00000636876 NCKAP1LP55160 1127 aa17.64■□□□□ 0.41
CLN6-216ENST00000636876 MBTD1Q05BQ5 628 aa17.64■□□□□ 0.41
CLN6-216ENST00000636876 PNOCQ13519 176 aa17.64■□□□□ 0.41
CLN6-216ENST00000636876 FAM178BQ8IXR5 827 aa17.64■□□□□ 0.41
CLN6-216ENST00000636876 TMEM161BQ8NDZ6 487 aa17.64■□□□□ 0.41
CLN6-216ENST00000636876 SEPT8Q92599 483 aa17.64■□□□□ 0.41
CLN6-216ENST00000636876 CCDC113Q9H0I3 377 aa17.64■□□□□ 0.41
CLN6-216ENST00000636876 OLFML3Q9NRN5 406 aa17.64■□□□□ 0.41
CLN6-216ENST00000636876 PADI3Q9ULW8 664 aa17.64■□□□□ 0.41
CLN6-216ENST00000636876 ST3GAL5Q9UNP4 418 aa17.64■□□□□ 0.41
CLN6-216ENST00000636876 H0YCG3 227 aa17.63■□□□□ 0.41
CLN6-216ENST00000636876 GPR182O15218 404 aa17.63■□□□□ 0.41
CLN6-216ENST00000636876 MBD3O95983 291 aa17.63■□□□□ 0.41
CLN6-216ENST00000636876 MAPTP10636 758 aaKnown RBP17.63■□□□□ 0.41
CLN6-216ENST00000636876 EPHB4P54760 987 aa17.63■□□□□ 0.41
CLN6-216ENST00000636876 EHHADHQ08426 723 aa17.63■□□□□ 0.41
CLN6-216ENST00000636876 NFX1Q12986 1120 aaKnown RBP17.63■□□□□ 0.41
CLN6-216ENST00000636876 CNKSR3Q6P9H4 555 aa17.63■□□□□ 0.41
CLN6-216ENST00000636876 CATSPER4Q7RTX7 472 aa17.63■□□□□ 0.41
CLN6-216ENST00000636876 DBF4BQ8NFT6 615 aa17.63■□□□□ 0.41
CLN6-216ENST00000636876 TMEM134Q9H6X4 195 aa17.63■□□□□ 0.41
CLN6-216ENST00000636876 PHLPP2Q6ZVD8 1323 aa17.63■□□□□ 0.41
CLN6-216ENST00000636876 DENND3A2RUS2 1198 aa17.62■□□□□ 0.41
CLN6-216ENST00000636876 K7ENM7 598 aa17.62■□□□□ 0.41
CLN6-216ENST00000636876 RPN1P04843 607 aaKnown RBP17.62■□□□□ 0.41
CLN6-216ENST00000636876 PRKCBP05771 671 aa17.62■□□□□ 0.41
CLN6-216ENST00000636876 ACRP10323 421 aa17.62■□□□□ 0.41
CLN6-216ENST00000636876 SCP2P22307 547 aa17.62■□□□□ 0.41
CLN6-216ENST00000636876 NMT1P30419 496 aaKnown RBP17.62■□□□□ 0.41
CLN6-216ENST00000636876 PCBP1Q15365 356 aaKnown RBP eCLIP17.62■□□□□ 0.41
CLN6-216ENST00000636876 MAPK6Q16659 721 aa17.62■□□□□ 0.41
CLN6-216ENST00000636876 AMHR2Q16671 573 aa17.62■□□□□ 0.41
CLN6-216ENST00000636876 FAM187BQ17R55 369 aa17.62■□□□□ 0.41
CLN6-216ENST00000636876 TCTN1Q2MV58 587 aa17.62■□□□□ 0.41
CLN6-216ENST00000636876 FAM26FQ5R3K3 315 aa17.62■□□□□ 0.41
CLN6-216ENST00000636876 PPP4R3CPQ6ZMV5 832 aa17.62■□□□□ 0.41
CLN6-216ENST00000636876 C16orf59Q7L2K0 433 aa17.62■□□□□ 0.41
CLN6-216ENST00000636876 TAS1R3Q7RTX0 852 aa17.62■□□□□ 0.41
CLN6-216ENST00000636876 HAUS6Q7Z4H7 955 aa17.62■□□□□ 0.41
CLN6-216ENST00000636876 SLC17A8Q8NDX2 589 aa17.62■□□□□ 0.41
CLN6-216ENST00000636876 APBB2Q92870 758 aa17.62■□□□□ 0.41
CLN6-216ENST00000636876 KCNN1Q92952 543 aa17.62■□□□□ 0.41
CLN6-216ENST00000636876 FZD8Q9H461 694 aa17.62■□□□□ 0.41
CLN6-216ENST00000636876 CLSTN2Q9H4D0 955 aa17.62■□□□□ 0.41
CLN6-216ENST00000636876 ST6GALNAC4Q9H4F1 302 aa17.62■□□□□ 0.41
CLN6-216ENST00000636876 MRPL44Q9H9J2 332 aaKnown RBP17.62■□□□□ 0.41
CLN6-216ENST00000636876 EXOC1Q9NV70 894 aa17.62■□□□□ 0.41
CLN6-216ENST00000636876 PRMT7Q9NVM4 692 aaPredicted RBP17.62■□□□□ 0.41
CLN6-216ENST00000636876 TBC1D7Q9P0N9 293 aa17.62■□□□□ 0.41
CLN6-216ENST00000636876 K7ERI5 159 aa17.61■□□□□ 0.41
CLN6-216ENST00000636876 ERLIN2O94905 339 aa17.61■□□□□ 0.41
CLN6-216ENST00000636876 SMC2O95347 1197 aa17.61■□□□□ 0.41
CLN6-216ENST00000636876 PTMSP20962 102 aa17.61■□□□□ 0.41
CLN6-216ENST00000636876 KMT5BQ4FZB7 885 aa17.61■□□□□ 0.41
CLN6-216ENST00000636876 TMEM240Q5SV17 173 aa17.61■□□□□ 0.41
CLN6-216ENST00000636876 PSRC1Q6PGN9 363 aaPredicted RBP17.61■□□□□ 0.41
CLN6-216ENST00000636876 FAM43BQ6ZT52 329 aaPredicted RBP17.61■□□□□ 0.41
CLN6-216ENST00000636876 ZNF720Q7Z2F6 126 aa17.61■□□□□ 0.41
CLN6-216ENST00000636876 HPS3Q969F9 1004 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms