RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 EPSTI1Q96J88 318 aa7.46□□□□□ -1.22
UPF3B-205ENST00000636792 CEP170P1Q96L14 293 aa7.46□□□□□ -1.22
UPF3B-205ENST00000636792 DRC1Q96MC2 740 aa7.46□□□□□ -1.22
UPF3B-205ENST00000636792 TOX2Q96NM4 488 aa7.46□□□□□ -1.22
UPF3B-205ENST00000636792 PNMA5Q96PV4 448 aa7.46□□□□□ -1.22
UPF3B-205ENST00000636792 ATP6V0A4Q9HBG4 840 aa7.46□□□□□ -1.22
UPF3B-205ENST00000636792 GDPD2Q9HCC8 539 aa7.46□□□□□ -1.22
UPF3B-205ENST00000636792 LMBRD1Q9NUN5 540 aa7.46□□□□□ -1.22
UPF3B-205ENST00000636792 BLOC1S4Q9NUP1 217 aa7.46□□□□□ -1.22
UPF3B-205ENST00000636792 RGL1Q9NZL6 768 aa7.46□□□□□ -1.22
UPF3B-205ENST00000636792 TUBE1Q9UJT0 475 aa7.46□□□□□ -1.22
UPF3B-205ENST00000636792 DNMT3LQ9UJW3 386 aa7.46□□□□□ -1.22
UPF3B-205ENST00000636792 DNMT3AQ9Y6K1 912 aaPredicted RBP7.46□□□□□ -1.22
UPF3B-205ENST00000636792 ALPK3Q96L96 1907 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 A0A1B0GVL5 298 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 PP2D1A8MPX8 630 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 ARVCFO00192 962 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 POLR2DO15514 142 aaKnown RBP7.45□□□□□ -1.22
UPF3B-205ENST00000636792 PRPF40AO75400 957 aaKnown RBP7.45□□□□□ -1.22
UPF3B-205ENST00000636792 MAFO75444 373 aaPredicted RBP7.45□□□□□ -1.22
UPF3B-205ENST00000636792 ZNF202O95125 648 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 PLA2G4BP0C869 781 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 SMIM10L2AP0DMW4 78 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 SMIM10L2BP0DMW5 78 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 MAPTP10636 758 aaKnown RBP7.45□□□□□ -1.22
UPF3B-205ENST00000636792 CYP11B2P19099 503 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 ATP4AP20648 1035 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 PPP1R2P41236 205 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 DNM2P50570 870 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 CDK7P50613 346 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 NDUFA8P51970 172 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 POLGP54098 1239 aaPredicted RBP7.45□□□□□ -1.22
UPF3B-205ENST00000636792 SLC12A3P55017 1021 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 PTK7Q13308 1070 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 ALCAMQ13740 583 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 MXD4Q14582 209 aaPredicted RBP7.45□□□□□ -1.22
UPF3B-205ENST00000636792 GRIK4Q16099 956 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 KLHL40Q2TBA0 621 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 NAALADL2Q58DX5 795 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 XKR9Q5GH70 373 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 UTP14CQ5TAP6 766 aaKnown RBP7.45□□□□□ -1.22
UPF3B-205ENST00000636792 KRBA2Q6ZNG9 492 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 USP49Q70CQ1 688 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 ANKRD33Q7Z3H0 272 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 SH3RF1Q7Z6J0 888 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 UBE2Q1Q7Z7E8 422 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 ZNF410Q86VK4 478 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 BPHLQ86WA6 291 aaPredicted RBP7.45□□□□□ -1.22
UPF3B-205ENST00000636792 NME8Q8N427 588 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 SVOPQ8N4V2 548 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 LINC01465Q8N7H1 131 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 CNNM3Q8NE01 707 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 LMBR1Q8WVP7 490 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 CCDC47Q96A33 483 aaKnown RBP7.45□□□□□ -1.22
UPF3B-205ENST00000636792 DHX58Q96C10 678 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 CEP89Q96ST8 783 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 MAP7D2Q96T17 732 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 NFKBIZQ9BYH8 718 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 BHMT2Q9H2M3 363 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 C11orf49Q9H6J7 331 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 BCAS3Q9H6U6 928 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 PDLIM7Q9NR12 457 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 LARSQ9P2J5 1176 aaKnown RBP7.45□□□□□ -1.22
UPF3B-205ENST00000636792 WRAP73Q9P2S5 460 aaPredicted RBP7.45□□□□□ -1.22
UPF3B-205ENST00000636792 PCDHA2Q9Y5H9 948 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 SQORQ9Y6N5 450 aa7.45□□□□□ -1.22
UPF3B-205ENST00000636792 A0A087X0B3 334 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 PVALEFA0A1B0GWK0 134 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 FRMD3A2A2Y4 597 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 ZBTB42B2RXF5 422 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 E9PMD0 336 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 TBCAO75347 108 aaKnown RBP7.44□□□□□ -1.22
UPF3B-205ENST00000636792 KIF20AO95235 890 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 C22orf31O95567 290 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 INSRRP14616 1297 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 GAP43P17677 238 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 MARK3P27448 753 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 CDC25AP30304 524 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 GRM5P41594 1212 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 NAMPTP43490 491 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 ZNF131P52739 623 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 SNW1Q13573 536 aaKnown RBP7.44□□□□□ -1.22
UPF3B-205ENST00000636792 TFDP1Q14186 410 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 EMC2Q15006 297 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 ECM1Q16610 540 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 NBPF20Q3BBV1 942 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 MTERF2Q49AM1 385 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 SPECC1Q5M775 1068 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 ODR4Q5SWX8 454 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 IER5Q5VY09 327 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 RINT1Q6NUQ1 792 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 SLC39A5Q6ZMH5 540 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 STXBP4Q6ZWJ1 553 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 C1orf186Q6ZWK4 172 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 SERINC5Q86VE9 423 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 CCDC65Q8IXS2 484 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 FAM126BQ8IXS8 530 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 PDILTQ8N807 584 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 TRIML1Q8N9V2 468 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 SPATA20Q8TB22 786 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms