RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 ASH2LQ9UBL3 628 aa5.62□□□□□ -1.51
CLN5-212ENST00000636602 KCNG1Q9UIX4 513 aa5.62□□□□□ -1.51
CLN5-212ENST00000636602 RIPOR2Q9Y4F9 1068 aa5.62□□□□□ -1.51
CLN5-212ENST00000636602 PCSK5Q92824 1860 aa5.62□□□□□ -1.51
CLN5-212ENST00000636602 PLEKHD1A6NEE1 506 aa5.61□□□□□ -1.51
CLN5-212ENST00000636602 VCAM1P19320 739 aa5.61□□□□□ -1.51
CLN5-212ENST00000636602 SDHAP31040 664 aa5.61□□□□□ -1.51
CLN5-212ENST00000636602 ITGA1P56199 1179 aa5.61□□□□□ -1.51
CLN5-212ENST00000636602 GRIN1Q05586 938 aa5.61□□□□□ -1.51
CLN5-212ENST00000636602 DPTQ07507 201 aa5.61□□□□□ -1.51
CLN5-212ENST00000636602 ADCY1Q08828 1119 aa5.61□□□□□ -1.51
CLN5-212ENST00000636602 BIRC2Q13490 618 aa5.61□□□□□ -1.51
CLN5-212ENST00000636602 HDAC1Q13547 482 aaPredicted RBP5.61□□□□□ -1.51
CLN5-212ENST00000636602 IGFL4Q6B9Z1 124 aa5.61□□□□□ -1.51
CLN5-212ENST00000636602 ETV3LQ6ZN32 361 aa5.61□□□□□ -1.51
CLN5-212ENST00000636602 ARHGEF18Q6ZSZ5 1173 aa5.61□□□□□ -1.51
CLN5-212ENST00000636602 MILR1Q7Z6M3 343 aa5.61□□□□□ -1.51
CLN5-212ENST00000636602 DGKHQ86XP1 1220 aa5.61□□□□□ -1.51
CLN5-212ENST00000636602 NME9Q86XW9 330 aa5.61□□□□□ -1.51
CLN5-212ENST00000636602 AMER2Q8N7J2 671 aa5.61□□□□□ -1.51
CLN5-212ENST00000636602 C7orf31Q8N865 590 aa5.61□□□□□ -1.51
CLN5-212ENST00000636602 Q8TCH9 128 aa5.61□□□□□ -1.51
CLN5-212ENST00000636602 CLEC4DQ8WXI8 215 aa5.61□□□□□ -1.51
CLN5-212ENST00000636602 PTPN18Q99952 460 aa5.61□□□□□ -1.51
CLN5-212ENST00000636602 OBP2AQ9NY56 170 aa5.61□□□□□ -1.51
CLN5-212ENST00000636602 USP36Q9P275 1121 aaKnown RBP5.61□□□□□ -1.51
CLN5-212ENST00000636602 RCAN3Q9UKA8 241 aa5.61□□□□□ -1.51
CLN5-212ENST00000636602 RASSF10A6NK89 507 aa5.6□□□□□ -1.51
CLN5-212ENST00000636602 CYP1A1P04798 512 aaPredicted RBP5.6□□□□□ -1.51
CLN5-212ENST00000636602 MMEP08473 750 aa5.6□□□□□ -1.51
CLN5-212ENST00000636602 CLEC2LP0C7M8 214 aa5.6□□□□□ -1.51
CLN5-212ENST00000636602 ENPP1P22413 925 aa5.6□□□□□ -1.51
CLN5-212ENST00000636602 SRSF2Q01130 221 aaKnown RBP5.6□□□□□ -1.51
CLN5-212ENST00000636602 GTF2H3Q13889 308 aa5.6□□□□□ -1.51
CLN5-212ENST00000636602 FSCN1Q16658 493 aaKnown RBP5.6□□□□□ -1.51
CLN5-212ENST00000636602 TOR2AQ5JU69 321 aa5.6□□□□□ -1.51
CLN5-212ENST00000636602 GORABQ5T7V8 394 aa5.6□□□□□ -1.51
CLN5-212ENST00000636602 SLFN13Q68D06 897 aa5.6□□□□□ -1.51
CLN5-212ENST00000636602 CCDC62Q6P9F0 684 aa5.6□□□□□ -1.51
CLN5-212ENST00000636602 CD300LDQ6UXZ3 194 aa5.6□□□□□ -1.51
CLN5-212ENST00000636602 EPM2AIP1Q7L775 607 aaPredicted RBP5.6□□□□□ -1.51
CLN5-212ENST00000636602 CXorf67Q86X51 503 aaPredicted RBP5.6□□□□□ -1.51
CLN5-212ENST00000636602 MORC4Q8TE76 937 aa5.6□□□□□ -1.51
CLN5-212ENST00000636602 RPS6KC1Q96S38 1066 aa5.6□□□□□ -1.51
CLN5-212ENST00000636602 ORAI2Q96SN7 254 aa5.6□□□□□ -1.51
CLN5-212ENST00000636602 NUP88Q99567 741 aaPredicted RBP5.6□□□□□ -1.51
CLN5-212ENST00000636602 ANO3Q9BYT9 981 aa5.6□□□□□ -1.51
CLN5-212ENST00000636602 QRSL1Q9H0R6 528 aaKnown RBP5.6□□□□□ -1.51
CLN5-212ENST00000636602 POFUT1Q9H488 388 aa5.6□□□□□ -1.51
CLN5-212ENST00000636602 MYH16Q9H6N6 1097 aa5.6□□□□□ -1.51
CLN5-212ENST00000636602 PRDM11Q9NQV5 511 aa5.6□□□□□ -1.51
CLN5-212ENST00000636602 EDARQ9UNE0 448 aa5.6□□□□□ -1.51
CLN5-212ENST00000636602 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.59□□□□□ -1.51
CLN5-212ENST00000636602 TCRBV5S2A0A599 114 aa5.59□□□□□ -1.51
CLN5-212ENST00000636602 SGSM2O43147 1006 aa5.59□□□□□ -1.51
CLN5-212ENST00000636602 APOL3O95236 402 aa5.59□□□□□ -1.51
CLN5-212ENST00000636602 OSMP13725 252 aa5.59□□□□□ -1.51
CLN5-212ENST00000636602 ZNF28P17035 718 aa5.59□□□□□ -1.51
CLN5-212ENST00000636602 LPOP22079 712 aaPredicted RBP5.59□□□□□ -1.51
CLN5-212ENST00000636602 UGT8Q16880 541 aa5.59□□□□□ -1.51
CLN5-212ENST00000636602 ARHGAP29Q52LW3 1261 aa5.59□□□□□ -1.51
CLN5-212ENST00000636602 CT83Q5H943 113 aa5.59□□□□□ -1.51
CLN5-212ENST00000636602 SYCP2LQ5T4T6 812 aa5.59□□□□□ -1.51
CLN5-212ENST00000636602 TIGD7Q6NT04 549 aaPredicted RBP5.59□□□□□ -1.51
CLN5-212ENST00000636602 ESPNLQ6ZVH7 1005 aa5.59□□□□□ -1.51
CLN5-212ENST00000636602 PHYKPLQ8IUZ5 450 aa5.59□□□□□ -1.51
CLN5-212ENST00000636602 EXOC8Q8IYI6 725 aa5.59□□□□□ -1.51
CLN5-212ENST00000636602 HIPK4Q8NE63 616 aa5.59□□□□□ -1.51
CLN5-212ENST00000636602 ASB15Q8WXK1 588 aa5.59□□□□□ -1.51
CLN5-212ENST00000636602 JADE3Q92613 823 aa5.59□□□□□ -1.51
CLN5-212ENST00000636602 FERMT2Q96AC1 680 aa5.59□□□□□ -1.51
CLN5-212ENST00000636602 ZNF503Q96F45 646 aa5.59□□□□□ -1.51
CLN5-212ENST00000636602 AIFM3Q96NN9 605 aa5.59□□□□□ -1.51
CLN5-212ENST00000636602 GBP4Q96PP9 640 aa5.59□□□□□ -1.51
CLN5-212ENST00000636602 TUBGCP5Q96RT8 1024 aa5.59□□□□□ -1.51
CLN5-212ENST00000636602 ANLNQ9NQW6 1124 aa5.59□□□□□ -1.51
CLN5-212ENST00000636602 UBA6A0AVT1 1052 aaPredicted RBP5.58□□□□□ -1.52
CLN5-212ENST00000636602 ACOT7O00154 380 aa5.58□□□□□ -1.52
CLN5-212ENST00000636602 ZNF202O95125 648 aa5.58□□□□□ -1.52
CLN5-212ENST00000636602 ZRANB2O95218 330 aaKnown RBP eCLIP5.58□□□□□ -1.52
CLN5-212ENST00000636602 HSPA6P17066 643 aa5.58□□□□□ -1.52
CLN5-212ENST00000636602 AGXTP21549 392 aa5.58□□□□□ -1.52
CLN5-212ENST00000636602 MANFP55145 182 aaKnown RBP5.58□□□□□ -1.52
CLN5-212ENST00000636602 HERVK_113P62684 666 aa5.58□□□□□ -1.52
CLN5-212ENST00000636602 OS9Q13438 667 aaPredicted RBP5.58□□□□□ -1.52
CLN5-212ENST00000636602 BRD3Q15059 726 aa5.58□□□□□ -1.52
CLN5-212ENST00000636602 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.58□□□□□ -1.52
CLN5-212ENST00000636602 IFIT1BQ5T764 474 aaKnown RBP5.58□□□□□ -1.52
CLN5-212ENST00000636602 PRAMEF18Q5VWM3 479 aa5.58□□□□□ -1.52
CLN5-212ENST00000636602 MIB1Q86YT6 1006 aa5.58□□□□□ -1.52
CLN5-212ENST00000636602 DNAJC10Q8IXB1 793 aa5.58□□□□□ -1.52
CLN5-212ENST00000636602 ARRDC4Q8NCT1 418 aa5.58□□□□□ -1.52
CLN5-212ENST00000636602 TIFAQ96CG3 184 aa5.58□□□□□ -1.52
CLN5-212ENST00000636602 EAF2Q96CJ1 260 aaPredicted RBP5.58□□□□□ -1.52
CLN5-212ENST00000636602 NAF1Q96HR8 494 aaKnown RBP5.58□□□□□ -1.52
CLN5-212ENST00000636602 MPHOSPH6Q99547 160 aaKnown RBP5.58□□□□□ -1.52
CLN5-212ENST00000636602 CSRNP2Q9H175 543 aa5.58□□□□□ -1.52
CLN5-212ENST00000636602 NMRK2Q9NPI5 230 aa5.58□□□□□ -1.52
CLN5-212ENST00000636602 PPP2R3BQ9Y5P8 575 aa5.58□□□□□ -1.52
CLN5-212ENST00000636602 GPR45Q9Y5Y3 372 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms