RNA–Protein interactions for RNA: ENST00000630482.2

SOX2-OT-256, SOX2 overlapping transcript, human

TSL 5

Gene SOX2-OT, Length 1,012 nt, Biotype sense overlapping.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX2-OT-256	ENST00000630482	SMC1A	Q14683	1233 aa	Known RBP	13.57	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	IER5L	Q5T953	404 aa		13.57	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	KRT25	Q7Z3Z0	450 aa		13.57	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	PBXIP1	Q96AQ6	731 aa		13.57	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	MRPL9	Q9BYD2	267 aa	Known RBP	13.57	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	TM6SF1	Q9BZW5	370 aa		13.57	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	GBP3	Q9H0R5	595 aa		13.57	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	ZBP1	Q9H171	429 aa		13.57	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	POMK	Q9H5K3	350 aa		13.57	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	NRDE2	Q9H7Z3	1164 aa		13.57	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	IFT122	Q9HBG6	1241 aa		13.57	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	CYP26B1	Q9NR63	512 aa		13.57	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	FAM105A	Q9NUU6	356 aa		13.57	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	TBC1D13	Q9NVG8	400 aa		13.57	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	DNAJB4	Q9UDY4	337 aa		13.57	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	MIA3	Q5JRA6	1907 aa		13.56	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	CCDC194	A0A1B0GVG4	234 aa		13.56	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	FSD2	A1L4K1	749 aa		13.56	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	CTDNEP1	O95476	244 aa		13.56	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	SRGAP2B	P0DMP2	458 aa		13.56	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	MRE11	P49959	708 aa		13.56	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	AFF1	P51825	1210 aa	Known RBP	13.56	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	PPP2R5C	Q13362	524 aa		13.56	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	ERICH6B	Q5W0A0	696 aa		13.56	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	CPLX2	Q6PUV4	134 aa	Known RBP	13.56	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	PIK3AP1	Q6ZUJ8	805 aa		13.56	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	CATSPER4	Q7RTX7	472 aa		13.56	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	NEK8	Q86SG6	692 aa		13.56	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	ZNF410	Q86VK4	478 aa		13.56	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	VPS52	Q8N1B4	723 aa		13.56	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	ZNF710	Q8N1W2	664 aa		13.56	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	C12orf76	Q8N812	135 aa	Predicted RBP	13.56	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	MRPL43	Q8N983	215 aa	Known RBP	13.56	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	HAS1	Q92839	578 aa		13.56	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	TMEM143	Q96AN5	459 aa		13.56	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	TMEM169	Q96HH4	297 aa		13.56	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	MFSD14A	Q96MC6	490 aa		13.56	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	VN1R3	Q9BXE9	311 aa		13.56	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	SLK	Q9H2G2	1235 aa	Predicted RBP	13.56	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	SMOC2	Q9H3U7	446 aa		13.56	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	MINDY3	Q9H8M7	445 aa		13.56	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	TSHZ2	Q9NRE2	1034 aa		13.56	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	AGPAT5	Q9NUQ2	364 aa		13.56	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	RGL1	Q9NZL6	768 aa		13.56	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	TPCN1	Q9ULQ1	816 aa		13.56	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	COL4A3BP	Q9Y5P4	624 aa		13.56	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	STK36	Q9NRP7	1315 aa		13.56	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	USP34	Q70CQ2	3546 aa		13.55	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	PIEZO1	Q92508	2521 aa		13.55	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	13.55	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	ZBTB39	O15060	712 aa		13.55	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	EPB41L2	O43491	1005 aa	Known RBP	13.55	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	CCNT1	O60563	726 aa	Known RBP	13.55	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	LARGE1	O95461	756 aa		13.55	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	PDGFB	P01127	241 aa	Predicted RBP	13.55	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	EPCAM	P16422	314 aa		13.55	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	QARS	P47897	775 aa	Known RBP	13.55	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	SLC11A1	P49279	550 aa		13.55	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	ALDH7A1	P49419	539 aa	Known RBP	13.55	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	DNM2	P50570	870 aa		13.55	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	VCP	P55072	806 aa	Known RBP	13.55	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	PTPN21	Q16825	1174 aa		13.55	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	RARS2	Q5T160	578 aa	Known RBP	13.55	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	NCAPH2	Q6IBW4	605 aa		13.55	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	GALNT17	Q6IS24	598 aa		13.55	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	BMP8A	Q7Z5Y6	402 aa		13.55	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	CASP10	Q92851	521 aa		13.55	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	ASIC4	Q96FT7	647 aa		13.55	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	LXN	Q9BS40	222 aa		13.55	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	TRAIP	Q9BWF2	469 aa		13.55	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	CHST12	Q9NRB3	414 aa		13.55	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	ANK1	P16157	1881 aa		13.55	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	C2CD4D	B7Z1M9	353 aa		13.54	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	OFD1	O75665	1012 aa		13.54	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	DDHD2	O94830	711 aa		13.54	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	CXCL14	O95715	111 aa		13.54	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	GALT	P07902	379 aa		13.54	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	FOSB	P53539	338 aa		13.54	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	POLG	P54098	1239 aa	Predicted RBP	13.54	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	CYP4A11	Q02928	519 aa		13.54	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	SPIRE1	Q08AE8	756 aa		13.54	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	SIGLEC14	Q08ET2	396 aa		13.54	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	NR5A1	Q13285	461 aa		13.54	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	CTTN	Q14247	550 aa	Known RBP	13.54	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	NOMO2	Q5JPE7	1267 aa		13.54	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	GLB1L	Q6UWU2	654 aa		13.54	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	AGMO	Q6ZNB7	445 aa		13.54	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	ZNF280B	Q86YH2	543 aa		13.54	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	IGSF21	Q96ID5	467 aa		13.54	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	DYDC2	Q96IM9	177 aa		13.54	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	CEP170P1	Q96L14	293 aa		13.54	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	KCNH6	Q9H252	994 aa		13.54	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	DHX33	Q9H6R0	707 aa	Known RBP	13.54	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	PCDHB2	Q9Y5E7	798 aa		13.54	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	NOTCH4	Q99466	2003 aa		13.53	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	WNT7A	O00755	349 aa		13.53	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	PFKFB2	O60825	505 aa		13.53	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	SSB	P05455	408 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	SRGAP2C	P0DJJ0	459 aa		13.53	□□□□□ -0.24
SOX2-OT-256	ENST00000630482	CTSA	P10619	480 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms