RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 DNAJB4Q9UDY4 337 aa22.69■■□□□ 1.22
TARDBP-228ENST00000629725 STK39Q9UEW8 545 aa22.69■■□□□ 1.22
TARDBP-228ENST00000629725 PIN4Q9Y237 131 aaKnown RBP22.69■■□□□ 1.22
TARDBP-228ENST00000629725 GNA11P29992 359 aa22.68■■□□□ 1.22
TARDBP-228ENST00000629725 C15orf39Q6ZRI6 1047 aa22.68■■□□□ 1.22
TARDBP-228ENST00000629725 VN1R3Q9BXE9 311 aa22.68■■□□□ 1.22
TARDBP-228ENST00000629725 FAM105AQ9NUU6 356 aa22.68■■□□□ 1.22
TARDBP-228ENST00000629725 IGSF9Q9P2J2 1179 aa22.68■■□□□ 1.22
TARDBP-228ENST00000629725 EP300Q09472 2414 aaPredicted RBP22.68■■□□□ 1.22
TARDBP-228ENST00000629725 A0A087WZ62 844 aa22.67■■□□□ 1.22
TARDBP-228ENST00000629725 MEIS3P2A8K0S8 358 aa22.67■■□□□ 1.22
TARDBP-228ENST00000629725 CHMP2AO43633 222 aa22.67■■□□□ 1.22
TARDBP-228ENST00000629725 OFD1O75665 1012 aa22.67■■□□□ 1.22
TARDBP-228ENST00000629725 SFNP31947 248 aa22.67■■□□□ 1.22
TARDBP-228ENST00000629725 ADD1P35611 737 aaKnown RBP22.67■■□□□ 1.22
TARDBP-228ENST00000629725 SLC11A1P49279 550 aa22.67■■□□□ 1.22
TARDBP-228ENST00000629725 DNM2P50570 870 aa22.67■■□□□ 1.22
TARDBP-228ENST00000629725 TARBP2Q15633 366 aaKnown RBP22.67■■□□□ 1.22
TARDBP-228ENST00000629725 KLHL5Q96PQ7 755 aa22.67■■□□□ 1.22
TARDBP-228ENST00000629725 FDXACB1Q9BRP7 624 aaPredicted RBP22.67■■□□□ 1.22
TARDBP-228ENST00000629725 INO80BQ9C086 356 aaPredicted RBP22.67■■□□□ 1.22
TARDBP-228ENST00000629725 NAP1L2Q9ULW6 460 aaPredicted RBP22.67■■□□□ 1.22
TARDBP-228ENST00000629725 STK25O00506 426 aa22.66■■□□□ 1.22
TARDBP-228ENST00000629725 MSH4O15457 936 aa22.66■■□□□ 1.22
TARDBP-228ENST00000629725 GAS7O60861 476 aa22.66■■□□□ 1.22
TARDBP-228ENST00000629725 SSBP05455 408 aaKnown RBP eCLIP22.66■■□□□ 1.22
TARDBP-228ENST00000629725 CNPP09543 421 aaKnown RBP22.66■■□□□ 1.22
TARDBP-228ENST00000629725 RAB27AP51159 221 aa22.66■■□□□ 1.22
TARDBP-228ENST00000629725 JAK3P52333 1124 aa22.66■■□□□ 1.22
TARDBP-228ENST00000629725 RCAN1P53805 252 aa22.66■■□□□ 1.22
TARDBP-228ENST00000629725 MTERF2Q49AM1 385 aa22.66■■□□□ 1.22
TARDBP-228ENST00000629725 KCNG4Q8TDN1 519 aa22.66■■□□□ 1.22
TARDBP-228ENST00000629725 RIT2Q99578 217 aa22.66■■□□□ 1.22
TARDBP-228ENST00000629725 SEPT9Q9UHD8 586 aaPredicted RBP22.66■■□□□ 1.22
TARDBP-228ENST00000629725 CCDC196A0A1B0GTZ2 297 aa22.65■■□□□ 1.22
TARDBP-228ENST00000629725 NARSO43776 548 aaKnown RBP22.65■■□□□ 1.22
TARDBP-228ENST00000629725 ZNF623O75123 536 aa22.65■■□□□ 1.22
TARDBP-228ENST00000629725 ZNF410Q86VK4 478 aa22.65■■□□□ 1.22
TARDBP-228ENST00000629725 ZNF280BQ86YH2 543 aa22.65■■□□□ 1.22
TARDBP-228ENST00000629725 RHPN2Q8IUC4 686 aa22.65■■□□□ 1.22
TARDBP-228ENST00000629725 BICD2Q8TD16 824 aa22.65■■□□□ 1.22
TARDBP-228ENST00000629725 PGBD4Q96DM1 585 aa22.65■■□□□ 1.22
TARDBP-228ENST00000629725 NIFKQ9BYG3 293 aaKnown RBP22.65■■□□□ 1.22
TARDBP-228ENST00000629725 SEMA4AQ9H3S1 761 aa22.65■■□□□ 1.22
TARDBP-228ENST00000629725 WNT16Q9UBV4 365 aa22.65■■□□□ 1.22
TARDBP-228ENST00000629725 LMNAP02545 664 aaKnown RBP22.64■■□□□ 1.21
TARDBP-228ENST00000629725 CFHP08603 1231 aa22.64■■□□□ 1.21
TARDBP-228ENST00000629725 LRCH2Q5VUJ6 765 aa22.64■■□□□ 1.21
TARDBP-228ENST00000629725 CATSPER4Q7RTX7 472 aa22.64■■□□□ 1.21
TARDBP-228ENST00000629725 URGCPQ8TCY9 931 aa22.64■■□□□ 1.21
TARDBP-228ENST00000629725 CCDC136Q96JN2 1154 aa22.64■■□□□ 1.21
TARDBP-228ENST00000629725 TEKT3Q9BXF9 490 aa22.64■■□□□ 1.21
TARDBP-228ENST00000629725 UNC45AQ9H3U1 944 aa22.64■■□□□ 1.21
TARDBP-228ENST00000629725 MRPL17Q9NRX2 175 aaKnown RBP22.64■■□□□ 1.21
TARDBP-228ENST00000629725 IGKV6-21A0A0C4DH24 114 aa22.63■■□□□ 1.21
TARDBP-228ENST00000629725 B4GALT3O60512 393 aa22.63■■□□□ 1.21
TARDBP-228ENST00000629725 LILRB3O75022 631 aa22.63■■□□□ 1.21
TARDBP-228ENST00000629725 ALDH2P05091 517 aa22.63■■□□□ 1.21
TARDBP-228ENST00000629725 RFX1P22670 979 aa22.63■■□□□ 1.21
TARDBP-228ENST00000629725 NONOQ15233 471 aaKnown RBP eCLIP22.63■■□□□ 1.21
TARDBP-228ENST00000629725 ADCK5Q3MIX3 580 aa22.63■■□□□ 1.21
TARDBP-228ENST00000629725 XKR3Q5GH77 459 aa22.63■■□□□ 1.21
TARDBP-228ENST00000629725 SLC5A5Q92911 643 aa22.63■■□□□ 1.21
TARDBP-228ENST00000629725 FAM193BQ96PV7 902 aaPredicted RBP22.63■■□□□ 1.21
TARDBP-228ENST00000629725 CEP89Q96ST8 783 aa22.63■■□□□ 1.21
TARDBP-228ENST00000629725 SH2D3AQ9BRG2 576 aa22.63■■□□□ 1.21
TARDBP-228ENST00000629725 MAN1C1Q9NR34 630 aa22.63■■□□□ 1.21
TARDBP-228ENST00000629725 SUCLA2Q9P2R7 463 aaPredicted RBP22.63■■□□□ 1.21
TARDBP-228ENST00000629725 KRBA1A5PL33 1030 aa22.62■■□□□ 1.21
TARDBP-228ENST00000629725 TMEM150BA6NC51 233 aa22.62■■□□□ 1.21
TARDBP-228ENST00000629725 N4BP1O75113 896 aaKnown RBP22.62■■□□□ 1.21
TARDBP-228ENST00000629725 DDHD2O94830 711 aa22.62■■□□□ 1.21
TARDBP-228ENST00000629725 GBP2P32456 591 aaPredicted RBP22.62■■□□□ 1.21
TARDBP-228ENST00000629725 FGD1P98174 961 aa22.62■■□□□ 1.21
TARDBP-228ENST00000629725 CMASQ8NFW8 434 aaPredicted RBP22.62■■□□□ 1.21
TARDBP-228ENST00000629725 RDM1Q8NG50 284 aa22.62■■□□□ 1.21
TARDBP-228ENST00000629725 RSAD2Q8WXG1 361 aa22.62■■□□□ 1.21
TARDBP-228ENST00000629725 STAMQ92783 540 aa22.62■■□□□ 1.21
TARDBP-228ENST00000629725 GJA10Q969M2 543 aa22.62■■□□□ 1.21
TARDBP-228ENST00000629725 NLRP4Q96MN2 994 aa22.62■■□□□ 1.21
TARDBP-228ENST00000629725 FAN1Q9Y2M0 1017 aa22.62■■□□□ 1.21
TARDBP-228ENST00000629725 PCDHB2Q9Y5E7 798 aa22.62■■□□□ 1.21
TARDBP-228ENST00000629725 CCDC195A0A1B0GUA6 201 aa22.61■■□□□ 1.21
TARDBP-228ENST00000629725 C2CD2LO14523 706 aa22.61■■□□□ 1.21
TARDBP-228ENST00000629725 PRPF3O43395 683 aaKnown RBP22.61■■□□□ 1.21
TARDBP-228ENST00000629725 USP11P51784 963 aa22.61■■□□□ 1.21
TARDBP-228ENST00000629725 TSGA10IPQ3SY00 556 aa22.61■■□□□ 1.21
TARDBP-228ENST00000629725 AGMOQ6ZNB7 445 aa22.61■■□□□ 1.21
TARDBP-228ENST00000629725 MIER3Q7Z3K6 550 aa22.61■■□□□ 1.21
TARDBP-228ENST00000629725 KSR1Q8IVT5 923 aa22.61■■□□□ 1.21
TARDBP-228ENST00000629725 RMDN1Q96DB5 314 aa22.61■■□□□ 1.21
TARDBP-228ENST00000629725 TMEM175Q9BSA9 504 aa22.61■■□□□ 1.21
TARDBP-228ENST00000629725 WDR6Q9NNW5 1121 aaKnown RBP22.61■■□□□ 1.21
TARDBP-228ENST00000629725 KANSL3Q9P2N6 904 aa22.61■■□□□ 1.21
TARDBP-228ENST00000629725 DPP7Q9UHL4 492 aa22.61■■□□□ 1.21
TARDBP-228ENST00000629725 EDIL3O43854 480 aa22.6■■□□□ 1.21
TARDBP-228ENST00000629725 MAFO75444 373 aaPredicted RBP22.6■■□□□ 1.21
TARDBP-228ENST00000629725 AK2P54819 239 aa22.6■■□□□ 1.21
TARDBP-228ENST00000629725 ELMSAN1Q6PJG2 1045 aa22.6■■□□□ 1.21
TARDBP-228ENST00000629725 CYP26C1Q6V0L0 522 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms