RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, human

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT1-223	ENST00000628857	KRTAP3-1	Q9BYR8	98 aa		4.23	□□□□□ -1.73
CNOT1-223	ENST00000628857	PLA2G3	Q9NZ20	509 aa		4.23	□□□□□ -1.73
CNOT1-223	ENST00000628857	TSC22D4	Q9Y3Q8	395 aa		4.23	□□□□□ -1.73
CNOT1-223	ENST00000628857	TCAF1	Q9Y4C2	921 aa		4.23	□□□□□ -1.73
CNOT1-223	ENST00000628857		A0A1W2PR48	441 aa		4.22	□□□□□ -1.73
CNOT1-223	ENST00000628857	NRP1	O14786	923 aa		4.22	□□□□□ -1.73
CNOT1-223	ENST00000628857	PCDH8	O95206	1070 aa		4.22	□□□□□ -1.73
CNOT1-223	ENST00000628857	BPIFB4	P59827	614 aa		4.22	□□□□□ -1.73
CNOT1-223	ENST00000628857	ATP2C1	P98194	919 aa	Predicted RBP	4.22	□□□□□ -1.73
CNOT1-223	ENST00000628857	TCIRG1	Q13488	830 aa		4.22	□□□□□ -1.73
CNOT1-223	ENST00000628857	GRM7	Q14831	915 aa		4.22	□□□□□ -1.73
CNOT1-223	ENST00000628857	PITRM1	Q5JRX3	1037 aa		4.22	□□□□□ -1.73
CNOT1-223	ENST00000628857	IQSEC1	Q6DN90	963 aa		4.22	□□□□□ -1.73
CNOT1-223	ENST00000628857	MAMDC4	Q6UXC1	1216 aa		4.22	□□□□□ -1.73
CNOT1-223	ENST00000628857	DBX2	Q6ZNG2	339 aa		4.22	□□□□□ -1.73
CNOT1-223	ENST00000628857	GLB1L2	Q8IW92	636 aa		4.22	□□□□□ -1.73
CNOT1-223	ENST00000628857	GPR135	Q8IZ08	494 aa		4.22	□□□□□ -1.73
CNOT1-223	ENST00000628857	FUK	Q8N0W3	1084 aa		4.22	□□□□□ -1.73
CNOT1-223	ENST00000628857	SSH1	Q8WYL5	1049 aa		4.22	□□□□□ -1.73
CNOT1-223	ENST00000628857	GNRHR2	Q96P88	292 aa		4.22	□□□□□ -1.73
CNOT1-223	ENST00000628857	UIMC1	Q96RL1	719 aa		4.22	□□□□□ -1.73
CNOT1-223	ENST00000628857	DPYSL5	Q9BPU6	564 aa		4.22	□□□□□ -1.73
CNOT1-223	ENST00000628857	PLA2G12B	Q9BX93	195 aa		4.22	□□□□□ -1.73
CNOT1-223	ENST00000628857	C12orf65	Q9H3J6	166 aa	Known RBP	4.22	□□□□□ -1.73
CNOT1-223	ENST00000628857	TOPORS	Q9NS56	1045 aa	Predicted RBP	4.22	□□□□□ -1.73
CNOT1-223	ENST00000628857	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	4.22	□□□□□ -1.73
CNOT1-223	ENST00000628857	MYRF	Q9Y2G1	1151 aa		4.22	□□□□□ -1.73
CNOT1-223	ENST00000628857	ATP8A1	Q9Y2Q0	1164 aa		4.22	□□□□□ -1.73
CNOT1-223	ENST00000628857	LY86	O95711	162 aa		4.21	□□□□□ -1.74
CNOT1-223	ENST00000628857	ZNF20	P17024	532 aa		4.21	□□□□□ -1.74
CNOT1-223	ENST00000628857	RIN1	Q13671	783 aa		4.21	□□□□□ -1.74
CNOT1-223	ENST00000628857	SPIDR	Q14159	915 aa		4.21	□□□□□ -1.74
CNOT1-223	ENST00000628857	R3HDM1	Q15032	1099 aa	Known RBP	4.21	□□□□□ -1.74
CNOT1-223	ENST00000628857	UGT8	Q16880	541 aa		4.21	□□□□□ -1.74
CNOT1-223	ENST00000628857	METTL24	Q5JXM2	366 aa		4.21	□□□□□ -1.74
CNOT1-223	ENST00000628857	MFSD5	Q6N075	450 aa		4.21	□□□□□ -1.74
CNOT1-223	ENST00000628857		Q6ZSN1	163 aa		4.21	□□□□□ -1.74
CNOT1-223	ENST00000628857	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	4.21	□□□□□ -1.74
CNOT1-223	ENST00000628857	CMTM4	Q8IZR5	234 aa		4.21	□□□□□ -1.74
CNOT1-223	ENST00000628857	ANKRD53	Q8N9V6	530 aa		4.21	□□□□□ -1.74
CNOT1-223	ENST00000628857	OR14K1	Q8NGZ2	314 aa		4.21	□□□□□ -1.74
CNOT1-223	ENST00000628857	ATL2	Q8NHH9	583 aa		4.21	□□□□□ -1.74
CNOT1-223	ENST00000628857	ZCRB1	Q8TBF4	217 aa	Known RBP	4.21	□□□□□ -1.74
CNOT1-223	ENST00000628857	C8orf49	Q96NF6	230 aa		4.21	□□□□□ -1.74
CNOT1-223	ENST00000628857	GPHA2	Q96T91	129 aa		4.21	□□□□□ -1.74
CNOT1-223	ENST00000628857	FDXACB1	Q9BRP7	624 aa	Predicted RBP	4.21	□□□□□ -1.74
CNOT1-223	ENST00000628857	ANO3	Q9BYT9	981 aa		4.21	□□□□□ -1.74
CNOT1-223	ENST00000628857	KLC2	Q9H0B6	622 aa		4.21	□□□□□ -1.74
CNOT1-223	ENST00000628857	ENKD1	Q9H0I2	346 aa		4.21	□□□□□ -1.74
CNOT1-223	ENST00000628857	DEF6	Q9H4E7	631 aa		4.21	□□□□□ -1.74
CNOT1-223	ENST00000628857	AGO3	Q9H9G7	860 aa	Known RBP	4.21	□□□□□ -1.74
CNOT1-223	ENST00000628857	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
CNOT1-223	ENST00000628857	DNAI1	Q9UI46	699 aa		4.21	□□□□□ -1.74
CNOT1-223	ENST00000628857	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
CNOT1-223	ENST00000628857	RBM8A	Q9Y5S9	174 aa	Known RBP	4.21	□□□□□ -1.74
CNOT1-223	ENST00000628857	CDY2A	Q9Y6F7	541 aa		4.21	□□□□□ -1.74
CNOT1-223	ENST00000628857	TRIM75P	A6NK02	468 aa		4.2	□□□□□ -1.74
CNOT1-223	ENST00000628857	GOLGA8A	A7E2F4	631 aa		4.2	□□□□□ -1.74
CNOT1-223	ENST00000628857	GOLGA8B	A8MQT2	603 aa		4.2	□□□□□ -1.74
CNOT1-223	ENST00000628857	ALG1L2	C9J202	215 aa		4.2	□□□□□ -1.74
CNOT1-223	ENST00000628857	CYP27B1	O15528	508 aa		4.2	□□□□□ -1.74
CNOT1-223	ENST00000628857	PHF2	O75151	1096 aa		4.2	□□□□□ -1.74
CNOT1-223	ENST00000628857	TOX4	O94842	621 aa		4.2	□□□□□ -1.74
CNOT1-223	ENST00000628857	GAST	P01350	101 aa		4.2	□□□□□ -1.74
CNOT1-223	ENST00000628857	HNRNPL	P14866	589 aa	Known RBP eCLIP	4.2	□□□□□ -1.74
CNOT1-223	ENST00000628857	BUD31	P41223	144 aa	Predicted RBP	4.2	□□□□□ -1.74
CNOT1-223	ENST00000628857	ERVK-21	P61565	698 aa		4.2	□□□□□ -1.74
CNOT1-223	ENST00000628857	KRT85	P78386	507 aa		4.2	□□□□□ -1.74
CNOT1-223	ENST00000628857	HHEX	Q03014	270 aa		4.2	□□□□□ -1.74
CNOT1-223	ENST00000628857	CD69	Q07108	199 aa		4.2	□□□□□ -1.74
CNOT1-223	ENST00000628857	FOXL1	Q12952	345 aa		4.2	□□□□□ -1.74
CNOT1-223	ENST00000628857	TRIM25	Q14258	630 aa	Known RBP	4.2	□□□□□ -1.74
CNOT1-223	ENST00000628857	PRKD1	Q15139	912 aa	Predicted RBP	4.2	□□□□□ -1.74
CNOT1-223	ENST00000628857	FAM180A	Q6UWF9	173 aa		4.2	□□□□□ -1.74
CNOT1-223	ENST00000628857	LMBR1L	Q6UX01	489 aa		4.2	□□□□□ -1.74
CNOT1-223	ENST00000628857	KCNK18	Q7Z418	384 aa		4.2	□□□□□ -1.74
CNOT1-223	ENST00000628857	DDX42	Q86XP3	938 aa	Known RBP eCLIP	4.2	□□□□□ -1.74
CNOT1-223	ENST00000628857	ANKRD35	Q8N283	1001 aa		4.2	□□□□□ -1.74
CNOT1-223	ENST00000628857	AHCYL2	Q96HN2	611 aa	Known RBP	4.2	□□□□□ -1.74
CNOT1-223	ENST00000628857	PDCD2L	Q9BRP1	358 aa		4.2	□□□□□ -1.74
CNOT1-223	ENST00000628857	KRTAP4-7	Q9BYR0	210 aa		4.2	□□□□□ -1.74
CNOT1-223	ENST00000628857	MS4A5	Q9H3V2	200 aa		4.2	□□□□□ -1.74
CNOT1-223	ENST00000628857	IL23A	Q9NPF7	189 aa		4.2	□□□□□ -1.74
CNOT1-223	ENST00000628857	EVL	Q9UI08	416 aa	Predicted RBP	4.2	□□□□□ -1.74
CNOT1-223	ENST00000628857	MAGEL2	Q9UJ55	1249 aa		4.2	□□□□□ -1.74
CNOT1-223	ENST00000628857	USP18	Q9UMW8	372 aa		4.2	□□□□□ -1.74
CNOT1-223	ENST00000628857		A0A1W2PRX2	142 aa		4.19	□□□□□ -1.74
CNOT1-223	ENST00000628857	MUSK	O15146	869 aa		4.19	□□□□□ -1.74
CNOT1-223	ENST00000628857	LTA4H	P09960	611 aa	Known RBP	4.19	□□□□□ -1.74
CNOT1-223	ENST00000628857	GPR3	P46089	330 aa		4.19	□□□□□ -1.74
CNOT1-223	ENST00000628857	TMPRSS15	P98073	1019 aa		4.19	□□□□□ -1.74
CNOT1-223	ENST00000628857	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	4.19	□□□□□ -1.74
CNOT1-223	ENST00000628857	CCDC62	Q6P9F0	684 aa		4.19	□□□□□ -1.74
CNOT1-223	ENST00000628857	FAM111B	Q6SJ93	734 aa		4.19	□□□□□ -1.74
CNOT1-223	ENST00000628857	GAREM2	Q75VX8	874 aa		4.19	□□□□□ -1.74
CNOT1-223	ENST00000628857	THEMIS	Q8N1K5	641 aa	Predicted RBP	4.19	□□□□□ -1.74
CNOT1-223	ENST00000628857	PIK3C3	Q8NEB9	887 aa		4.19	□□□□□ -1.74
CNOT1-223	ENST00000628857	AUTS2	Q8WXX7	1259 aa		4.19	□□□□□ -1.74
CNOT1-223	ENST00000628857	FATE1	Q969F0	183 aa		4.19	□□□□□ -1.74
CNOT1-223	ENST00000628857	EAF2	Q96CJ1	260 aa	Predicted RBP	4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms