RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 UNC13DQ70J99 1090 aa13.61□□□□□ -0.23
SYNGAP1-207ENST00000628646 ABI1Q8IZP0 508 aa13.61□□□□□ -0.23
SYNGAP1-207ENST00000628646 CPLX3Q8WVH0 158 aa13.61□□□□□ -0.23
SYNGAP1-207ENST00000628646 HPS3Q969F9 1004 aa13.61□□□□□ -0.23
SYNGAP1-207ENST00000628646 ACCSQ96QU6 501 aa13.61□□□□□ -0.23
SYNGAP1-207ENST00000628646 PCIF1Q9H4Z3 704 aa13.61□□□□□ -0.23
SYNGAP1-207ENST00000628646 KBTBD4Q9NVX7 518 aa13.61□□□□□ -0.23
SYNGAP1-207ENST00000628646 FLRT1Q9NZU1 646 aa13.61□□□□□ -0.23
SYNGAP1-207ENST00000628646 PARP2Q9UGN5 583 aa13.61□□□□□ -0.23
SYNGAP1-207ENST00000628646 LRFN2Q9ULH4 789 aa13.61□□□□□ -0.23
SYNGAP1-207ENST00000628646 PTPN22Q9Y2R2 807 aa13.61□□□□□ -0.23
SYNGAP1-207ENST00000628646 DNAJC25-GNG10A0A024R161 153 aa13.61□□□□□ -0.23
SYNGAP1-207ENST00000628646 MYMKA6NI61 221 aa13.61□□□□□ -0.23
SYNGAP1-207ENST00000628646 CLIC2O15247 247 aa13.61□□□□□ -0.23
SYNGAP1-207ENST00000628646 FXR1P51114 621 aaKnown RBP eCLIP13.61□□□□□ -0.23
SYNGAP1-207ENST00000628646 MTFR1Q15390 333 aa13.61□□□□□ -0.23
SYNGAP1-207ENST00000628646 ZNF658Q5TYW1 1059 aaPredicted RBP13.61□□□□□ -0.23
SYNGAP1-207ENST00000628646 CGNQ9P2M7 1197 aaKnown RBP13.61□□□□□ -0.23
SYNGAP1-207ENST00000628646 SOWAHDA6NJG2 315 aa13.6□□□□□ -0.23
SYNGAP1-207ENST00000628646 HOXC6P09630 235 aa13.6□□□□□ -0.23
SYNGAP1-207ENST00000628646 COASYQ13057 564 aa13.6□□□□□ -0.23
SYNGAP1-207ENST00000628646 KRT31Q15323 416 aa13.6□□□□□ -0.23
SYNGAP1-207ENST00000628646 PKN2Q16513 984 aaKnown RBP13.6□□□□□ -0.23
SYNGAP1-207ENST00000628646 KIZQ2M2Z5 673 aa13.6□□□□□ -0.23
SYNGAP1-207ENST00000628646 LBHD1Q9BQE6 289 aaPredicted RBP13.6□□□□□ -0.23
SYNGAP1-207ENST00000628646 TRIM9Q9C026 710 aa13.6□□□□□ -0.23
SYNGAP1-207ENST00000628646 GDAQ9Y2T3 454 aa13.6□□□□□ -0.23
SYNGAP1-207ENST00000628646 CABYRO75952 493 aa13.6□□□□□ -0.23
SYNGAP1-207ENST00000628646 CYP11B2P19099 503 aa13.6□□□□□ -0.23
SYNGAP1-207ENST00000628646 SLC17A8Q8NDX2 589 aa13.6□□□□□ -0.23
SYNGAP1-207ENST00000628646 RUSC1Q9BVN2 902 aa13.6□□□□□ -0.23
SYNGAP1-207ENST00000628646 DNAI1Q9UI46 699 aa13.6□□□□□ -0.23
SYNGAP1-207ENST00000628646 SPDYE4A6NLX3 237 aa13.6□□□□□ -0.23
SYNGAP1-207ENST00000628646 NMT1P30419 496 aaKnown RBP13.6□□□□□ -0.23
SYNGAP1-207ENST00000628646 CASQ1P31415 396 aa13.6□□□□□ -0.23
SYNGAP1-207ENST00000628646 PRCPP42785 496 aa13.6□□□□□ -0.23
SYNGAP1-207ENST00000628646 MXD4Q14582 209 aaPredicted RBP13.6□□□□□ -0.23
SYNGAP1-207ENST00000628646 ERCC6LQ2NKX8 1250 aa13.6□□□□□ -0.23
SYNGAP1-207ENST00000628646 NBPF20Q3BBV1 942 aa13.6□□□□□ -0.23
SYNGAP1-207ENST00000628646 RINT1Q6NUQ1 792 aa13.6□□□□□ -0.23
SYNGAP1-207ENST00000628646 NFRKBQ6P4R8 1299 aa13.6□□□□□ -0.23
SYNGAP1-207ENST00000628646 THNSL1Q8IYQ7 743 aa13.6□□□□□ -0.23
SYNGAP1-207ENST00000628646 PXYLP1Q8TE99 480 aa13.6□□□□□ -0.23
SYNGAP1-207ENST00000628646 DNAJB3Q8WWF6 145 aa13.6□□□□□ -0.23
SYNGAP1-207ENST00000628646 CCDC127Q96BQ5 260 aa13.6□□□□□ -0.23
SYNGAP1-207ENST00000628646 SRRTQ9BXP5 876 aaKnown RBP13.6□□□□□ -0.23
SYNGAP1-207ENST00000628646 DEF6Q9H4E7 631 aa13.6□□□□□ -0.23
SYNGAP1-207ENST00000628646 MFAP3LO75121 409 aa13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 USP8P40818 1118 aa13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 RARRES1P49788 294 aa13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 CBX1P83916 185 aa13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 PTGISQ16647 500 aa13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 UGCGQ16739 394 aa13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 CCDC51Q96ER9 411 aa13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 HDAC6Q9UBN7 1215 aa13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 GJD2Q9UKL4 321 aa13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 TNNI1P19237 187 aa13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 YARSP54577 528 aaKnown RBP13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 ENOX2Q16206 610 aaKnown RBP13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 HAUS6Q7Z4H7 955 aa13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 ADSSL1Q8N142 457 aa13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 SYT2Q8N9I0 419 aaPredicted RBP13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 PRPF31Q8WWY3 499 aaKnown RBP13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 MMTAG2Q9BU76 263 aaKnown RBP13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 KIFC3Q9BVG8 833 aa13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 IMPG2Q9BZV3 1241 aa13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 GBP3Q9H0R5 595 aa13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 VAV3Q9UKW4 847 aa13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 TADA3O75528 432 aa13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 CCDC175P0C221 793 aa13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 ARHGAP1Q07960 439 aa13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 MAMDC4Q6UXC1 1216 aa13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 UBXN4Q92575 508 aa13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 DESI2Q9BSY9 194 aa13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 NAA15Q9BXJ9 866 aaKnown RBP13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 TMEM39AQ9NV64 488 aa13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 ADGRG1Q9Y653 693 aa13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 GSTTP1A0A1W2PQM5 241 aa13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 RSPH10B2B2RC85 870 aa13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 CSDE1O75534 798 aaKnown RBP13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 RSPH10BP0C881 870 aa13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 SMIM10L2AP0DMW4 78 aa13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 SMIM10L2BP0DMW5 78 aa13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 ITGA7Q13683 1181 aa13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 ABHD15Q6UXT9 468 aa13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 NECAB2Q7Z6G3 386 aa13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 LENG9Q96B70 501 aa13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 RPS6KC1Q96S38 1066 aa13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 C2orf40Q9H1Z8 148 aa13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 PIN4Q9Y237 131 aaKnown RBP13.59□□□□□ -0.23
SYNGAP1-207ENST00000628646 RPS6KA5O75582 802 aa13.58□□□□□ -0.24
SYNGAP1-207ENST00000628646 ABL1P00519 1130 aa13.58□□□□□ -0.24
SYNGAP1-207ENST00000628646 DLATP10515 647 aaKnown RBP13.58□□□□□ -0.24
SYNGAP1-207ENST00000628646 RAG1P15918 1043 aa13.58□□□□□ -0.24
SYNGAP1-207ENST00000628646 IRF5Q13568 498 aa13.58□□□□□ -0.24
SYNGAP1-207ENST00000628646 PLCB4Q15147 1175 aa13.58□□□□□ -0.24
SYNGAP1-207ENST00000628646 KCNK18Q7Z418 384 aa13.58□□□□□ -0.24
SYNGAP1-207ENST00000628646 SESTD1Q86VW0 696 aa13.58□□□□□ -0.24
SYNGAP1-207ENST00000628646 PNMA5Q96PV4 448 aa13.58□□□□□ -0.24
SYNGAP1-207ENST00000628646 ZBED2Q9BTP6 218 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms