RNA–Protein interactions for RNA: ENST00000628293.1

CCDC163-204, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 1,076 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-204ENST00000628293 GRIN2CQ14957 1233 aa8.73□□□□□ -1.01
CCDC163-204ENST00000628293 ZRSR1Q15695 479 aaKnown RBP8.73□□□□□ -1.01
CCDC163-204ENST00000628293 ARSHQ5FYA8 562 aa8.73□□□□□ -1.01
CCDC163-204ENST00000628293 AXDND1Q5T1B0 1012 aaPredicted RBP8.73□□□□□ -1.01
CCDC163-204ENST00000628293 SRGAP1Q7Z6B7 1085 aa8.73□□□□□ -1.01
CCDC163-204ENST00000628293 KCTD17Q8N5Z5 321 aa8.73□□□□□ -1.01
CCDC163-204ENST00000628293 SYT2Q8N9I0 419 aaPredicted RBP8.73□□□□□ -1.01
CCDC163-204ENST00000628293 FAM161BQ96MY7 647 aa8.73□□□□□ -1.01
CCDC163-204ENST00000628293 ZNF396Q96N95 335 aaPredicted RBP8.73□□□□□ -1.01
CCDC163-204ENST00000628293 SCLT1Q96NL6 688 aa8.73□□□□□ -1.01
CCDC163-204ENST00000628293 RAD9AQ99638 391 aa8.73□□□□□ -1.01
CCDC163-204ENST00000628293 NFKBIZQ9BYH8 718 aa8.73□□□□□ -1.01
CCDC163-204ENST00000628293 CCDC113Q9H0I3 377 aa8.73□□□□□ -1.01
CCDC163-204ENST00000628293 NT5C3AQ9H0P0 336 aa8.73□□□□□ -1.01
CCDC163-204ENST00000628293 ZNF576Q9H609 170 aa8.73□□□□□ -1.01
CCDC163-204ENST00000628293 AGPAT5Q9NUQ2 364 aa8.73□□□□□ -1.01
CCDC163-204ENST00000628293 MSRAQ9UJ68 235 aa8.73□□□□□ -1.01
CCDC163-204ENST00000628293 DNM3Q9UQ16 869 aa8.73□□□□□ -1.01
CCDC163-204ENST00000628293 MYO7AQ13402 2215 aa8.73□□□□□ -1.01
CCDC163-204ENST00000628293 CITO14578 2027 aa8.73□□□□□ -1.01
CCDC163-204ENST00000628293 ANK1P16157 1881 aa8.72□□□□□ -1.01
CCDC163-204ENST00000628293 TTLL13PA6NNM8 815 aa8.72□□□□□ -1.01
CCDC163-204ENST00000628293 TSPAN1O60635 241 aa8.72□□□□□ -1.01
CCDC163-204ENST00000628293 HIP1RO75146 1068 aa8.72□□□□□ -1.01
CCDC163-204ENST00000628293 DGKIO75912 1065 aa8.72□□□□□ -1.01
CCDC163-204ENST00000628293 PLA2G4BP0C869 781 aa8.72□□□□□ -1.01
CCDC163-204ENST00000628293 SFPQP23246 707 aaKnown RBP eCLIP8.72□□□□□ -1.01
CCDC163-204ENST00000628293 GUCY2CP25092 1073 aa8.72□□□□□ -1.01
CCDC163-204ENST00000628293 UBA7P41226 1012 aa8.72□□□□□ -1.01
CCDC163-204ENST00000628293 PHKA2P46019 1235 aa8.72□□□□□ -1.01
CCDC163-204ENST00000628293 STK38Q15208 465 aa8.72□□□□□ -1.01
CCDC163-204ENST00000628293 ODR4Q5SWX8 454 aa8.72□□□□□ -1.01
CCDC163-204ENST00000628293 UBXN11Q5T124 520 aa8.72□□□□□ -1.01
CCDC163-204ENST00000628293 FAM102BQ5T8I3 360 aa8.72□□□□□ -1.01
CCDC163-204ENST00000628293 PPP2R2DQ66LE6 453 aa8.72□□□□□ -1.01
CCDC163-204ENST00000628293 SHC4Q6S5L8 630 aa8.72□□□□□ -1.01
CCDC163-204ENST00000628293 FAM43BQ6ZT52 329 aaPredicted RBP8.72□□□□□ -1.01
CCDC163-204ENST00000628293 SLC24A5Q71RS6 500 aa8.72□□□□□ -1.01
CCDC163-204ENST00000628293 CATSPER4Q7RTX7 472 aa8.72□□□□□ -1.01
CCDC163-204ENST00000628293 ZNF598Q86UK7 904 aaKnown RBP8.72□□□□□ -1.01
CCDC163-204ENST00000628293 ECHDC2Q86YB7 292 aa8.72□□□□□ -1.01
CCDC163-204ENST00000628293 NPAS4Q8IUM7 802 aa8.72□□□□□ -1.01
CCDC163-204ENST00000628293 KRI1Q8N9T8 703 aaKnown RBP8.72□□□□□ -1.01
CCDC163-204ENST00000628293 RAD54LQ92698 747 aa8.72□□□□□ -1.01
CCDC163-204ENST00000628293 CALML4Q96GE6 196 aa8.72□□□□□ -1.01
CCDC163-204ENST00000628293 KIFC3Q9BVG8 833 aa8.72□□□□□ -1.01
CCDC163-204ENST00000628293 TRAIPQ9BWF2 469 aa8.72□□□□□ -1.01
CCDC163-204ENST00000628293 SLC28A3Q9HAS3 691 aa8.72□□□□□ -1.01
CCDC163-204ENST00000628293 C1orf112Q9NSG2 853 aa8.72□□□□□ -1.01
CCDC163-204ENST00000628293 DAXXQ9UER7 740 aaPredicted RBP8.72□□□□□ -1.01
CCDC163-204ENST00000628293 PIN4Q9Y237 131 aaKnown RBP8.72□□□□□ -1.01
CCDC163-204ENST00000628293 INSL6Q9Y581 213 aa8.72□□□□□ -1.01
CCDC163-204ENST00000628293 BRWD1Q9NSI6 2320 aa8.72□□□□□ -1.01
CCDC163-204ENST00000628293 PRUNE2Q8WUY3 3088 aa8.72□□□□□ -1.01
CCDC163-204ENST00000628293 NPHP3-ACAD11A0A0J9YXS1 232 aa8.71□□□□□ -1.02
CCDC163-204ENST00000628293 A0A0U1RQF3 1178 aa8.71□□□□□ -1.02
CCDC163-204ENST00000628293 DENND3A2RUS2 1198 aa8.71□□□□□ -1.02
CCDC163-204ENST00000628293 LRRIQ4A6NIV6 560 aa8.71□□□□□ -1.02
CCDC163-204ENST00000628293 MEIS3P2A8K0S8 358 aa8.71□□□□□ -1.02
CCDC163-204ENST00000628293 B4GALT5O43286 388 aa8.71□□□□□ -1.02
CCDC163-204ENST00000628293 LPXNO60711 386 aa8.71□□□□□ -1.02
CCDC163-204ENST00000628293 ARF4P18085 180 aaPredicted RBP8.71□□□□□ -1.02
CCDC163-204ENST00000628293 NAMPTP43490 491 aa8.71□□□□□ -1.02
CCDC163-204ENST00000628293 ERVK-21P61565 698 aa8.71□□□□□ -1.02
CCDC163-204ENST00000628293 TFDP1Q14186 410 aa8.71□□□□□ -1.02
CCDC163-204ENST00000628293 MCM6Q14566 821 aa8.71□□□□□ -1.02
CCDC163-204ENST00000628293 E2F4Q16254 413 aa8.71□□□□□ -1.02
CCDC163-204ENST00000628293 ATL3Q6DD88 541 aa8.71□□□□□ -1.02
CCDC163-204ENST00000628293 TAS1R3Q7RTX0 852 aa8.71□□□□□ -1.02
CCDC163-204ENST00000628293 LARP4BQ92615 738 aaKnown RBP8.71□□□□□ -1.02
CCDC163-204ENST00000628293 KIFAP3Q92845 792 aa8.71□□□□□ -1.02
CCDC163-204ENST00000628293 CDK5RAP3Q96JB5 506 aa8.71□□□□□ -1.02
CCDC163-204ENST00000628293 CDX2Q99626 313 aaPredicted RBP8.71□□□□□ -1.02
CCDC163-204ENST00000628293 ZBED2Q9BTP6 218 aa8.71□□□□□ -1.02
CCDC163-204ENST00000628293 INO80BQ9C086 356 aaPredicted RBP8.71□□□□□ -1.02
CCDC163-204ENST00000628293 FZD8Q9H461 694 aa8.71□□□□□ -1.02
CCDC163-204ENST00000628293 PRDM12Q9H4Q4 367 aa8.71□□□□□ -1.02
CCDC163-204ENST00000628293 ELAC1Q9H777 363 aaKnown RBP8.71□□□□□ -1.02
CCDC163-204ENST00000628293 CHST12Q9NRB3 414 aa8.71□□□□□ -1.02
CCDC163-204ENST00000628293 TMEM161AQ9NX61 479 aa8.71□□□□□ -1.02
CCDC163-204ENST00000628293 HCSTQ9UBK5 93 aa8.71□□□□□ -1.02
CCDC163-204ENST00000628293 RCOR1Q9UKL0 485 aa8.71□□□□□ -1.02
CCDC163-204ENST00000628293 PCDHA7Q9UN72 937 aa8.71□□□□□ -1.02
CCDC163-204ENST00000628293 SFI1A8K8P3 1242 aa8.7□□□□□ -1.02
CCDC163-204ENST00000628293 INO80B-WBP1J3KQ70 363 aa8.7□□□□□ -1.02
CCDC163-204ENST00000628293 RFXAPO00287 272 aa8.7□□□□□ -1.02
CCDC163-204ENST00000628293 CUTAO60888 179 aa8.7□□□□□ -1.02
CCDC163-204ENST00000628293 ZNF623O75123 536 aa8.7□□□□□ -1.02
CCDC163-204ENST00000628293 SSBP05455 408 aaKnown RBP eCLIP8.7□□□□□ -1.02
CCDC163-204ENST00000628293 STAG3L1P0CL83 205 aa8.7□□□□□ -1.02
CCDC163-204ENST00000628293 FGFR1P11362 822 aa8.7□□□□□ -1.02
CCDC163-204ENST00000628293 NPTX2P47972 431 aa8.7□□□□□ -1.02
CCDC163-204ENST00000628293 ZNF131P52739 623 aa8.7□□□□□ -1.02
CCDC163-204ENST00000628293 RAD51AP2Q09MP3 1159 aa8.7□□□□□ -1.02
CCDC163-204ENST00000628293 GIT2Q14161 759 aa8.7□□□□□ -1.02
CCDC163-204ENST00000628293 ADGRE1Q14246 886 aa8.7□□□□□ -1.02
CCDC163-204ENST00000628293 PCBP1Q15365 356 aaKnown RBP eCLIP8.7□□□□□ -1.02
CCDC163-204ENST00000628293 FAM187BQ17R55 369 aa8.7□□□□□ -1.02
CCDC163-204ENST00000628293 CLLU1OSQ5K130 101 aa8.7□□□□□ -1.02
CCDC163-204ENST00000628293 GPBP1Q86WP2 473 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms