RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 NAALADL2Q58DX5 795 aa13.66□□□□□ -0.22
SCN8A-209ENST00000627620 FRA10AC1Q70Z53 315 aa13.66□□□□□ -0.22
SCN8A-209ENST00000627620 PDCD6IPQ8WUM4 868 aaKnown RBP13.66□□□□□ -0.22
SCN8A-209ENST00000627620 CCDC124Q96CT7 223 aaKnown RBP13.66□□□□□ -0.22
SCN8A-209ENST00000627620 TSPOAP1O95153 1857 aa13.65□□□□□ -0.22
SCN8A-209ENST00000627620 ZBTB7AO95365 584 aa13.65□□□□□ -0.22
SCN8A-209ENST00000627620 FTLP02792 175 aaPredicted RBP13.65□□□□□ -0.22
SCN8A-209ENST00000627620 PNMA6AP0CW24 399 aaPredicted RBP13.65□□□□□ -0.22
SCN8A-209ENST00000627620 USP11P51784 963 aa13.65□□□□□ -0.22
SCN8A-209ENST00000627620 WDR75Q8IWA0 830 aaKnown RBP13.65□□□□□ -0.22
SCN8A-209ENST00000627620 GUF1Q8N442 669 aaKnown RBP13.65□□□□□ -0.22
SCN8A-209ENST00000627620 TRIM4Q9C037 500 aa13.65□□□□□ -0.22
SCN8A-209ENST00000627620 CYP26B1Q9NR63 512 aa13.65□□□□□ -0.22
SCN8A-209ENST00000627620 OVOS2A0A0G2JMS6 1433 aa13.65□□□□□ -0.22
SCN8A-209ENST00000627620 OVOS2A0A0J9YW53 1432 aa13.65□□□□□ -0.22
SCN8A-209ENST00000627620 OVOS2Q6IE36 1432 aa13.65□□□□□ -0.22
SCN8A-209ENST00000627620 CAV1Q03135 178 aa13.65□□□□□ -0.22
SCN8A-209ENST00000627620 HABP4Q5JVS0 413 aaKnown RBP13.65□□□□□ -0.22
SCN8A-209ENST00000627620 KIAA1755Q5JYT7 1200 aa13.65□□□□□ -0.22
SCN8A-209ENST00000627620 STAG2Q8N3U4 1231 aa13.65□□□□□ -0.22
SCN8A-209ENST00000627620 SCG3Q8WXD2 468 aaKnown RBP13.65□□□□□ -0.22
SCN8A-209ENST00000627620 ANGPTL2Q9UKU9 493 aa13.65□□□□□ -0.22
SCN8A-209ENST00000627620 STAP1Q9ULZ2 295 aa13.65□□□□□ -0.22
SCN8A-209ENST00000627620 PLA2R1Q13018 1463 aa13.65□□□□□ -0.22
SCN8A-209ENST00000627620 DRP2Q13474 957 aa13.65□□□□□ -0.22
SCN8A-209ENST00000627620 KRT80Q6KB66 452 aa13.65□□□□□ -0.22
SCN8A-209ENST00000627620 C1orf228Q6PIY5 440 aa13.65□□□□□ -0.22
SCN8A-209ENST00000627620 SGMS1Q86VZ5 419 aa13.65□□□□□ -0.22
SCN8A-209ENST00000627620 SP8Q8IXZ3 490 aa13.65□□□□□ -0.22
SCN8A-209ENST00000627620 SYT2Q8N9I0 419 aaPredicted RBP13.65□□□□□ -0.22
SCN8A-209ENST00000627620 TRIM55Q9BYV6 548 aa13.65□□□□□ -0.22
SCN8A-209ENST00000627620 HACD3Q9P035 362 aa13.65□□□□□ -0.22
SCN8A-209ENST00000627620 IP6K2Q9UHH9 426 aa13.65□□□□□ -0.22
SCN8A-209ENST00000627620 HPCAL4Q9UM19 191 aa13.65□□□□□ -0.22
SCN8A-209ENST00000627620 NCK2O43639 380 aa13.65□□□□□ -0.22
SCN8A-209ENST00000627620 ANGPTL8Q6UXH0 198 aa13.65□□□□□ -0.22
SCN8A-209ENST00000627620 UPF3AQ9H1J1 476 aaKnown RBP13.65□□□□□ -0.22
SCN8A-209ENST00000627620 FAM217BQ9NTX9 383 aaPredicted RBP13.65□□□□□ -0.22
SCN8A-209ENST00000627620 SUN2Q9UH99 717 aa13.65□□□□□ -0.22
SCN8A-209ENST00000627620 KIF28PB7ZC32 967 aa13.65□□□□□ -0.23
SCN8A-209ENST00000627620 FCER1AP12319 257 aa13.65□□□□□ -0.23
SCN8A-209ENST00000627620 EEF1B2P24534 225 aaKnown RBP13.65□□□□□ -0.23
SCN8A-209ENST00000627620 CYFIP1Q7L576 1253 aa13.65□□□□□ -0.23
SCN8A-209ENST00000627620 TEX2Q8IWB9 1127 aa13.65□□□□□ -0.23
SCN8A-209ENST00000627620 GPD1LQ8N335 351 aa13.65□□□□□ -0.23
SCN8A-209ENST00000627620 EDEM3Q9BZQ6 932 aa13.65□□□□□ -0.23
SCN8A-209ENST00000627620 XAB2Q9HCS7 855 aaKnown RBP13.65□□□□□ -0.23
SCN8A-209ENST00000627620 PPARGC1AQ9UBK2 798 aaKnown RBP13.65□□□□□ -0.23
SCN8A-209ENST00000627620 ABCC3O15438 1527 aa13.64□□□□□ -0.23
SCN8A-209ENST00000627620 PNPLA7Q6ZV29 1317 aa13.64□□□□□ -0.23
SCN8A-209ENST00000627620 NFRKBQ6P4R8 1299 aa13.64□□□□□ -0.23
SCN8A-209ENST00000627620 URGCPQ8TCY9 931 aa13.64□□□□□ -0.23
SCN8A-209ENST00000627620 ZBTB18Q99592 522 aa13.64□□□□□ -0.23
SCN8A-209ENST00000627620 VPS11Q9H270 941 aa13.64□□□□□ -0.23
SCN8A-209ENST00000627620 SLC13A4Q9UKG4 626 aa13.64□□□□□ -0.23
SCN8A-209ENST00000627620 TEX33O43247 280 aa13.64□□□□□ -0.23
SCN8A-209ENST00000627620 SNX2O60749 519 aa13.64□□□□□ -0.23
SCN8A-209ENST00000627620 SCARF1Q14162 830 aa13.64□□□□□ -0.23
SCN8A-209ENST00000627620 KLHL38Q2WGJ6 581 aa13.64□□□□□ -0.23
SCN8A-209ENST00000627620 GIPC2Q8TF65 315 aa13.64□□□□□ -0.23
SCN8A-209ENST00000627620 OSBPL9Q96SU4 736 aa13.64□□□□□ -0.23
SCN8A-209ENST00000627620 GCOM2Q9BZD3 368 aaPredicted RBP13.64□□□□□ -0.23
SCN8A-209ENST00000627620 FGFR1OP2Q9NVK5 253 aa13.64□□□□□ -0.23
SCN8A-209ENST00000627620 TTC26A0AVF1 554 aa13.64□□□□□ -0.23
SCN8A-209ENST00000627620 CTIFO43310 598 aaKnown RBP13.64□□□□□ -0.23
SCN8A-209ENST00000627620 DCTN3O75935 186 aa13.64□□□□□ -0.23
SCN8A-209ENST00000627620 TRIM49P0CI25 452 aa13.64□□□□□ -0.23
SCN8A-209ENST00000627620 TRIM49CP0CI26 452 aa13.64□□□□□ -0.23
SCN8A-209ENST00000627620 ADORA2BP29275 332 aa13.64□□□□□ -0.23
SCN8A-209ENST00000627620 ATP2C1P98194 919 aaPredicted RBP13.64□□□□□ -0.23
SCN8A-209ENST00000627620 TAF11Q15544 211 aa13.64□□□□□ -0.23
SCN8A-209ENST00000627620 TRMT10CQ7L0Y3 403 aaKnown RBP13.64□□□□□ -0.23
SCN8A-209ENST00000627620 ELMOD1Q8N336 334 aa13.64□□□□□ -0.23
SCN8A-209ENST00000627620 RBAKQ9NYW8 714 aaPredicted RBP13.64□□□□□ -0.23
SCN8A-209ENST00000627620 VGLL3A8MV65 326 aa13.64□□□□□ -0.23
SCN8A-209ENST00000627620 SHC4Q6S5L8 630 aa13.64□□□□□ -0.23
SCN8A-209ENST00000627620 EPM2AIP1Q7L775 607 aaPredicted RBP13.64□□□□□ -0.23
SCN8A-209ENST00000627620 HERC5Q9UII4 1024 aaKnown RBP13.64□□□□□ -0.23
SCN8A-209ENST00000627620 KCNQ2O43526 872 aa13.63□□□□□ -0.23
SCN8A-209ENST00000627620 FOXD4Q12950 439 aaPredicted RBP13.63□□□□□ -0.23
SCN8A-209ENST00000627620 PDCLQ13371 301 aa13.63□□□□□ -0.23
SCN8A-209ENST00000627620 NFIXQ14938 502 aa13.63□□□□□ -0.23
SCN8A-209ENST00000627620 LCA5Q86VQ0 697 aa13.63□□□□□ -0.23
SCN8A-209ENST00000627620 LDHDQ86WU2 507 aa13.63□□□□□ -0.23
SCN8A-209ENST00000627620 PIP4K2CQ8TBX8 421 aa13.63□□□□□ -0.23
SCN8A-209ENST00000627620 RNF181Q9P0P0 153 aa13.63□□□□□ -0.23
SCN8A-209ENST00000627620 KRT7P08729 469 aa13.63□□□□□ -0.23
SCN8A-209ENST00000627620 FDX1P10109 184 aa13.63□□□□□ -0.23
SCN8A-209ENST00000627620 MYBL1P10243 752 aa13.63□□□□□ -0.23
SCN8A-209ENST00000627620 GUCY2CP25092 1073 aa13.63□□□□□ -0.23
SCN8A-209ENST00000627620 PMS2P54278 862 aa13.63□□□□□ -0.23
SCN8A-209ENST00000627620 PDCD2Q16342 344 aaPredicted RBP13.63□□□□□ -0.23
SCN8A-209ENST00000627620 FAM47EQ6ZV65 393 aa13.63□□□□□ -0.23
SCN8A-209ENST00000627620 AFG1LQ8WV93 481 aa13.63□□□□□ -0.23
SCN8A-209ENST00000627620 RPAP3Q9H6T3 665 aaPredicted RBP13.63□□□□□ -0.23
SCN8A-209ENST00000627620 MOSPD1Q9UJG1 213 aa13.63□□□□□ -0.23
SCN8A-209ENST00000627620 APOBEC2Q9Y235 224 aaKnown RBP13.63□□□□□ -0.23
SCN8A-209ENST00000627620 PCDHA10Q9Y5I2 948 aa13.63□□□□□ -0.23
SCN8A-209ENST00000627620 KPNA7A9QM74 516 aa13.63□□□□□ -0.23
SCN8A-209ENST00000627620 F5H423 210 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms