RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 DRC1Q96MC2 740 aa16.29■□□□□ 0.2
PNKP-221ENST00000627317 NLRP4Q96MN2 994 aa16.29■□□□□ 0.2
PNKP-221ENST00000627317 GOLPH3LQ9H4A5 285 aa16.29■□□□□ 0.2
PNKP-221ENST00000627317 MAGEF1Q9HAY2 307 aa16.29■□□□□ 0.2
PNKP-221ENST00000627317 RC3H2Q9HBD1 1191 aaKnown RBP16.29■□□□□ 0.2
PNKP-221ENST00000627317 USP25Q9UHP3 1055 aa16.29■□□□□ 0.2
PNKP-221ENST00000627317 HPSEQ9Y251 543 aa16.29■□□□□ 0.2
PNKP-221ENST00000627317 FAM237AA0A1B0GTK4 181 aa16.28■□□□□ 0.2
PNKP-221ENST00000627317 LINC01553A4QN01 128 aa16.28■□□□□ 0.2
PNKP-221ENST00000627317 ASAP2O43150 1006 aa16.28■□□□□ 0.2
PNKP-221ENST00000627317 LPXNO60711 386 aa16.28■□□□□ 0.2
PNKP-221ENST00000627317 HIP1RO75146 1068 aa16.28■□□□□ 0.2
PNKP-221ENST00000627317 POU3F3P20264 500 aaPredicted RBP16.28■□□□□ 0.2
PNKP-221ENST00000627317 GUCY2CP25092 1073 aa16.28■□□□□ 0.2
PNKP-221ENST00000627317 CD52P31358 61 aa16.28■□□□□ 0.2
PNKP-221ENST00000627317 ARL2P36404 184 aa16.28■□□□□ 0.2
PNKP-221ENST00000627317 GPC3P51654 580 aa16.28■□□□□ 0.2
PNKP-221ENST00000627317 LAMTOR4Q0VGL1 99 aa16.28■□□□□ 0.2
PNKP-221ENST00000627317 TFDP1Q14186 410 aa16.28■□□□□ 0.2
PNKP-221ENST00000627317 ZNF410Q86VK4 478 aa16.28■□□□□ 0.2
PNKP-221ENST00000627317 ASAP3Q8TDY4 903 aa16.28■□□□□ 0.2
PNKP-221ENST00000627317 IFT74Q96LB3 600 aa16.28■□□□□ 0.2
PNKP-221ENST00000627317 OSMRQ99650 979 aa16.28■□□□□ 0.2
PNKP-221ENST00000627317 TMX1Q9H3N1 280 aa16.28■□□□□ 0.2
PNKP-221ENST00000627317 CDHR5Q9HBB8 845 aa16.28■□□□□ 0.2
PNKP-221ENST00000627317 COL4A4P53420 1690 aaPredicted RBP16.27■□□□□ 0.2
PNKP-221ENST00000627317 NPHP3-ACAD11A0A0J9YXS1 232 aa16.27■□□□□ 0.2
PNKP-221ENST00000627317 GOLGA6L22H0YM25 854 aa16.27■□□□□ 0.2
PNKP-221ENST00000627317 TBCAO75347 108 aaKnown RBP16.27■□□□□ 0.2
PNKP-221ENST00000627317 GPR32O75388 356 aa16.27■□□□□ 0.2
PNKP-221ENST00000627317 GLRA2P23416 452 aa16.27■□□□□ 0.2
PNKP-221ENST00000627317 PHKA2P46019 1235 aa16.27■□□□□ 0.2
PNKP-221ENST00000627317 CRYBB1P53674 252 aaPredicted RBP16.27■□□□□ 0.2
PNKP-221ENST00000627317 ERVK-21P61565 698 aa16.27■□□□□ 0.2
PNKP-221ENST00000627317 UBE2HP62256 183 aa16.27■□□□□ 0.2
PNKP-221ENST00000627317 PPP2R5AQ15172 486 aa16.27■□□□□ 0.2
PNKP-221ENST00000627317 FAM117BQ6P1L5 589 aa16.27■□□□□ 0.2
PNKP-221ENST00000627317 RTN4RL1Q86UN2 441 aaPredicted RBP16.27■□□□□ 0.2
PNKP-221ENST00000627317 KSR1Q8IVT5 923 aa16.27■□□□□ 0.2
PNKP-221ENST00000627317 GAS2L1Q99501 681 aaPredicted RBP16.27■□□□□ 0.2
PNKP-221ENST00000627317 ZBED2Q9BTP6 218 aa16.27■□□□□ 0.2
PNKP-221ENST00000627317 LRRC27Q9C0I9 530 aa16.27■□□□□ 0.2
PNKP-221ENST00000627317 TNMDQ9H2S6 317 aa16.27■□□□□ 0.2
PNKP-221ENST00000627317 ADAMTS10Q9H324 1103 aa16.27■□□□□ 0.2
PNKP-221ENST00000627317 SERTAD1Q9UHV2 236 aa16.27■□□□□ 0.2
PNKP-221ENST00000627317 ODF2LQ9ULJ1 636 aa16.27■□□□□ 0.2
PNKP-221ENST00000627317 PADI3Q9ULW8 664 aa16.27■□□□□ 0.2
PNKP-221ENST00000627317 INSL6Q9Y581 213 aa16.27■□□□□ 0.2
PNKP-221ENST00000627317 CUL9Q8IWT3 2517 aa16.26■□□□□ 0.19
PNKP-221ENST00000627317 LRRIQ4A6NIV6 560 aa16.26■□□□□ 0.19
PNKP-221ENST00000627317 RFXAPO00287 272 aa16.26■□□□□ 0.19
PNKP-221ENST00000627317 ENPP3O14638 875 aa16.26■□□□□ 0.19
PNKP-221ENST00000627317 ACTN4O43707 911 aaKnown RBP16.26■□□□□ 0.19
PNKP-221ENST00000627317 GADD45BO75293 160 aaPredicted RBP16.26■□□□□ 0.19
PNKP-221ENST00000627317 PRPF40AO75400 957 aaKnown RBP16.26■□□□□ 0.19
PNKP-221ENST00000627317 FAM13AO94988 1023 aa16.26■□□□□ 0.19
PNKP-221ENST00000627317 SLFN14P0C7P3 912 aa16.26■□□□□ 0.19
PNKP-221ENST00000627317 LINC00271P0C7V0 271 aa16.26■□□□□ 0.19
PNKP-221ENST00000627317 SRGAP2CP0DJJ0 459 aa16.26■□□□□ 0.19
PNKP-221ENST00000627317 AMPD3Q01432 767 aa16.26■□□□□ 0.19
PNKP-221ENST00000627317 CACNB1Q02641 598 aaPredicted RBP16.26■□□□□ 0.19
PNKP-221ENST00000627317 FAM160A1Q05DH4 1040 aa16.26■□□□□ 0.19
PNKP-221ENST00000627317 CAPSQ13938 189 aa16.26■□□□□ 0.19
PNKP-221ENST00000627317 ARSHQ5FYA8 562 aa16.26■□□□□ 0.19
PNKP-221ENST00000627317 DAW1Q8N136 415 aa16.26■□□□□ 0.19
PNKP-221ENST00000627317 RNF149Q8NC42 400 aa16.26■□□□□ 0.19
PNKP-221ENST00000627317 SLC17A8Q8NDX2 589 aa16.26■□□□□ 0.19
PNKP-221ENST00000627317 ARNTL2Q8WYA1 636 aa16.26■□□□□ 0.19
PNKP-221ENST00000627317 STAMQ92783 540 aa16.26■□□□□ 0.19
PNKP-221ENST00000627317 CCDC34Q96HJ3 373 aa16.26■□□□□ 0.19
PNKP-221ENST00000627317 REEP2Q9BRK0 252 aa16.26■□□□□ 0.19
PNKP-221ENST00000627317 GCOM2Q9BZD3 368 aaPredicted RBP16.26■□□□□ 0.19
PNKP-221ENST00000627317 TSPYL2Q9H2G4 693 aaPredicted RBP16.26■□□□□ 0.19
PNKP-221ENST00000627317 ZHX3Q9H4I2 956 aa16.26■□□□□ 0.19
PNKP-221ENST00000627317 CERS4Q9HA82 394 aa16.26■□□□□ 0.19
PNKP-221ENST00000627317 POLD4Q9HCU8 107 aa16.26■□□□□ 0.19
PNKP-221ENST00000627317 ERVK-5Q9HDB9 667 aa16.26■□□□□ 0.19
PNKP-221ENST00000627317 A0A087WZ62 844 aa16.25■□□□□ 0.19
PNKP-221ENST00000627317 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.25■□□□□ 0.19
PNKP-221ENST00000627317 MYMKA6NI61 221 aa16.25■□□□□ 0.19
PNKP-221ENST00000627317 MAPK7Q13164 816 aa16.25■□□□□ 0.19
PNKP-221ENST00000627317 PAK2Q13177 524 aa16.25■□□□□ 0.19
PNKP-221ENST00000627317 DMP1Q13316 513 aaPredicted RBP16.25■□□□□ 0.19
PNKP-221ENST00000627317 DYMQ7RTS9 669 aa16.25■□□□□ 0.19
PNKP-221ENST00000627317 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.25■□□□□ 0.19
PNKP-221ENST00000627317 DDX12PQ92771 950 aa16.25■□□□□ 0.19
PNKP-221ENST00000627317 FDXACB1Q9BRP7 624 aaPredicted RBP16.25■□□□□ 0.19
PNKP-221ENST00000627317 KBTBD4Q9NVX7 518 aa16.25■□□□□ 0.19
PNKP-221ENST00000627317 NOC2LQ9Y3T9 749 aaKnown RBP16.25■□□□□ 0.19
PNKP-221ENST00000627317 MTCH2Q9Y6C9 303 aa16.25■□□□□ 0.19
PNKP-221ENST00000627317 RPS6KA5O75582 802 aa16.24■□□□□ 0.19
PNKP-221ENST00000627317 ZNF202O95125 648 aa16.24■□□□□ 0.19
PNKP-221ENST00000627317 DARSP14868 501 aaKnown RBP16.24■□□□□ 0.19
PNKP-221ENST00000627317 EIF4BP23588 611 aaKnown RBP16.24■□□□□ 0.19
PNKP-221ENST00000627317 NAMPTP43490 491 aa16.24■□□□□ 0.19
PNKP-221ENST00000627317 AFMP43652 599 aa16.24■□□□□ 0.19
PNKP-221ENST00000627317 PEX3P56589 373 aa16.24■□□□□ 0.19
PNKP-221ENST00000627317 GIT2Q14161 759 aa16.24■□□□□ 0.19
PNKP-221ENST00000627317 LONRF3Q496Y0 759 aa16.24■□□□□ 0.19
PNKP-221ENST00000627317 ODR4Q5SWX8 454 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms