RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 CETN1Q12798 172 aa24.03■■□□□ 1.44
PNKP-220ENST00000627232 GPIHBP1Q8IV16 184 aa24.03■■□□□ 1.44
PNKP-220ENST00000627232 NIFKQ9BYG3 293 aaKnown RBP24.03■■□□□ 1.44
PNKP-220ENST00000627232 ARGLU1Q9NWB6 273 aaPredicted RBP24.03■■□□□ 1.44
PNKP-220ENST00000627232 RBPJLQ9UBG7 517 aa24.03■■□□□ 1.44
PNKP-220ENST00000627232 AJAP1Q9UKB5 411 aaPredicted RBP24.03■■□□□ 1.44
PNKP-220ENST00000627232 A0A087X0T9 212 aa24.02■■□□□ 1.44
PNKP-220ENST00000627232 GFPT2O94808 682 aa24.02■■□□□ 1.44
PNKP-220ENST00000627232 OATP04181 439 aa24.02■■□□□ 1.44
PNKP-220ENST00000627232 FAM228BP0C875 321 aa24.02■■□□□ 1.44
PNKP-220ENST00000627232 PTK2Q05397 1052 aa24.02■■□□□ 1.44
PNKP-220ENST00000627232 GPAT2Q6NUI2 795 aa24.02■■□□□ 1.44
PNKP-220ENST00000627232 KCNV1Q6PIU1 500 aa24.02■■□□□ 1.44
PNKP-220ENST00000627232 RDH13Q8NBN7 331 aa24.02■■□□□ 1.44
PNKP-220ENST00000627232 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.02■■□□□ 1.44
PNKP-220ENST00000627232 MLXIPQ9HAP2 919 aa24.02■■□□□ 1.44
PNKP-220ENST00000627232 SIP14410 1827 aa24.01■■□□□ 1.43
PNKP-220ENST00000627232 LOC102724159A0A0B4J2E5 919 aa24.01■■□□□ 1.43
PNKP-220ENST00000627232 CTAGE15A4D2H0 777 aa24.01■■□□□ 1.43
PNKP-220ENST00000627232 FARP2O94887 1054 aaPredicted RBP24.01■■□□□ 1.43
PNKP-220ENST00000627232 CTAGE8P0CG41 777 aa24.01■■□□□ 1.43
PNKP-220ENST00000627232 PRLRP16471 622 aa24.01■■□□□ 1.43
PNKP-220ENST00000627232 ENPEPQ07075 957 aa24.01■■□□□ 1.43
PNKP-220ENST00000627232 PWP2Q15269 919 aaKnown RBP24.01■■□□□ 1.43
PNKP-220ENST00000627232 ZNF571Q7Z3V5 609 aaPredicted RBP24.01■■□□□ 1.43
PNKP-220ENST00000627232 CTAGE6Q86UF2 777 aa24.01■■□□□ 1.43
PNKP-220ENST00000627232 VPS36Q86VN1 386 aa24.01■■□□□ 1.43
PNKP-220ENST00000627232 CTAGE4Q8IX94 777 aa24.01■■□□□ 1.43
PNKP-220ENST00000627232 NOX5Q96PH1 765 aa24.01■■□□□ 1.43
PNKP-220ENST00000627232 CCDC94Q9BW85 323 aaPredicted RBP24.01■■□□□ 1.43
PNKP-220ENST00000627232 POLR3FQ9H1D9 316 aaPredicted RBP24.01■■□□□ 1.43
PNKP-220ENST00000627232 APEX2Q9UBZ4 518 aa24.01■■□□□ 1.43
PNKP-220ENST00000627232 ADAMTS1Q9UHI8 967 aa24.01■■□□□ 1.43
PNKP-220ENST00000627232 PUF60Q9UHX1 559 aaKnown RBP24.01■■□□□ 1.43
PNKP-220ENST00000627232 DNAJC12Q9UKB3 198 aa24.01■■□□□ 1.43
PNKP-220ENST00000627232 USP20Q9Y2K6 914 aa24.01■■□□□ 1.43
PNKP-220ENST00000627232 EMSYQ7Z589 1322 aa24.01■■□□□ 1.43
PNKP-220ENST00000627232 GSTTP1A0A1W2PQM5 241 aa24■■□□□ 1.43
PNKP-220ENST00000627232 BTNL10A8MVZ5 291 aa24■■□□□ 1.43
PNKP-220ENST00000627232 ANKRD63C9JTQ0 380 aa24■■□□□ 1.43
PNKP-220ENST00000627232 ENC1O14682 589 aa24■■□□□ 1.43
PNKP-220ENST00000627232 MOCS3O95396 460 aa24■■□□□ 1.43
PNKP-220ENST00000627232 CCDC172P0C7W6 258 aa24■■□□□ 1.43
PNKP-220ENST00000627232 ATP4AP20648 1035 aa24■■□□□ 1.43
PNKP-220ENST00000627232 CNGA1P29973 690 aa24■■□□□ 1.43
PNKP-220ENST00000627232 SOX5P35711 763 aa24■■□□□ 1.43
PNKP-220ENST00000627232 EMC2Q15006 297 aa24■■□□□ 1.43
PNKP-220ENST00000627232 NAB2Q15742 525 aa24■■□□□ 1.43
PNKP-220ENST00000627232 MTERF2Q49AM1 385 aa24■■□□□ 1.43
PNKP-220ENST00000627232 FAM160B1Q5W0V3 765 aa24■■□□□ 1.43
PNKP-220ENST00000627232 PNMA8AQ86V59 439 aaPredicted RBP24■■□□□ 1.43
PNKP-220ENST00000627232 LMO3Q8TAP4 145 aa24■■□□□ 1.43
PNKP-220ENST00000627232 GTF3C2Q8WUA4 911 aaPredicted RBP24■■□□□ 1.43
PNKP-220ENST00000627232 MROH8Q9H579 483 aa24■■□□□ 1.43
PNKP-220ENST00000627232 TXNRD2Q9NNW7 524 aa24■■□□□ 1.43
PNKP-220ENST00000627232 ARHGAP28Q9P2N2 729 aa24■■□□□ 1.43
PNKP-220ENST00000627232 CAPN6Q9Y6Q1 641 aa24■■□□□ 1.43
PNKP-220ENST00000627232 MYH10P35580 1976 aa24■■□□□ 1.43
PNKP-220ENST00000627232 ZNFX1Q9P2E3 1918 aaKnown RBP24■■□□□ 1.43
PNKP-220ENST00000627232 DNAJC25-GNG10A0A024R161 153 aa24■■□□□ 1.43
PNKP-220ENST00000627232 F8VZ95 297 aa24■■□□□ 1.43
PNKP-220ENST00000627232 SORBS3O60504 671 aa24■■□□□ 1.43
PNKP-220ENST00000627232 CKAP4Q07065 602 aaKnown RBP24■■□□□ 1.43
PNKP-220ENST00000627232 SNAPC2Q13487 334 aa24■■□□□ 1.43
PNKP-220ENST00000627232 BRDTQ58F21 947 aaPredicted RBP24■■□□□ 1.43
PNKP-220ENST00000627232 C1orf220Q5T0J3 134 aa24■■□□□ 1.43
PNKP-220ENST00000627232 GJB7Q6PEY0 223 aa24■■□□□ 1.43
PNKP-220ENST00000627232 SHCBP1Q8NEM2 672 aa24■■□□□ 1.43
PNKP-220ENST00000627232 AFAP1L1Q8TED9 768 aa24■■□□□ 1.43
PNKP-220ENST00000627232 RPGRIP1Q96KN7 1286 aa24■■□□□ 1.43
PNKP-220ENST00000627232 FBXL18Q96ME1 805 aa24■■□□□ 1.43
PNKP-220ENST00000627232 DHX33Q9H6R0 707 aaKnown RBP24■■□□□ 1.43
PNKP-220ENST00000627232 HDAC6Q9UBN7 1215 aa24■■□□□ 1.43
PNKP-220ENST00000627232 NENFQ9UMX5 172 aa24■■□□□ 1.43
PNKP-220ENST00000627232 PPME1Q9Y570 386 aa24■■□□□ 1.43
PNKP-220ENST00000627232 GARTP22102 1010 aa23.99■■□□□ 1.43
PNKP-220ENST00000627232 ADSSP30520 456 aa23.99■■□□□ 1.43
PNKP-220ENST00000627232 RFC5P40937 340 aa23.99■■□□□ 1.43
PNKP-220ENST00000627232 POLGP54098 1239 aaPredicted RBP23.99■■□□□ 1.43
PNKP-220ENST00000627232 DLG4P78352 724 aa23.99■■□□□ 1.43
PNKP-220ENST00000627232 EPC2Q52LR7 807 aa23.99■■□□□ 1.43
PNKP-220ENST00000627232 EAPPQ56P03 285 aaPredicted RBP23.99■■□□□ 1.43
PNKP-220ENST00000627232 TMC2Q8TDI7 906 aa23.99■■□□□ 1.43
PNKP-220ENST00000627232 ZNF526Q8TF50 670 aaPredicted RBP23.99■■□□□ 1.43
PNKP-220ENST00000627232 KIFC3Q9BVG8 833 aa23.99■■□□□ 1.43
PNKP-220ENST00000627232 NRBP2Q9NSY0 501 aa23.99■■□□□ 1.43
PNKP-220ENST00000627232 ADRB2P07550 413 aa23.98■■□□□ 1.43
PNKP-220ENST00000627232 SOX10P56693 466 aa23.98■■□□□ 1.43
PNKP-220ENST00000627232 PPP3CAQ08209 521 aa23.98■■□□□ 1.43
PNKP-220ENST00000627232 KCTD2Q14681 263 aa23.98■■□□□ 1.43
PNKP-220ENST00000627232 BMS1Q14692 1282 aaKnown RBP23.98■■□□□ 1.43
PNKP-220ENST00000627232 DRAP1Q14919 205 aaPredicted RBP23.98■■□□□ 1.43
PNKP-220ENST00000627232 ENOX2Q16206 610 aaKnown RBP23.98■■□□□ 1.43
PNKP-220ENST00000627232 SNRNP35Q16560 246 aaKnown RBP23.98■■□□□ 1.43
PNKP-220ENST00000627232 METTL7BQ6UX53 244 aa23.98■■□□□ 1.43
PNKP-220ENST00000627232 SEPT1Q8WYJ6 367 aa23.98■■□□□ 1.43
PNKP-220ENST00000627232 FGD4Q96M96 766 aa23.98■■□□□ 1.43
PNKP-220ENST00000627232 PCYT2Q99447 389 aa23.98■■□□□ 1.43
PNKP-220ENST00000627232 MMP19Q99542 508 aa23.98■■□□□ 1.43
PNKP-220ENST00000627232 ADGRA3Q8IWK6 1321 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms